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  <front>
    <journal-meta>
      <journal-id journal-id-type="publisher-id">OJGen</journal-id>
      <journal-title-group>
        <journal-title>Open Journal of Genetics</journal-title>
      </journal-title-group>
      <issn pub-type="epub">2162-4453</issn>
      <publisher>
        <publisher-name>Scientific Research Publishing</publisher-name>
      </publisher>
    </journal-meta>
    <article-meta>
      <article-id pub-id-type="doi">10.4236/ojgen.2017.74010</article-id>
      <article-id pub-id-type="publisher-id">OJGen-81209</article-id>
      <article-categories>
        <subj-group subj-group-type="heading">
          <subject>Articles</subject>
        </subj-group>
        <subj-group subj-group-type="Discipline-v2">
          <subject>Biomedical&amp;Life Sciences</subject>
        </subj-group>
      </article-categories>
      <title-group>
        <article-title>


          The Impact of Chemotherapy on EGFR Mutation Status in Non-Small-Cell Lung Cancer: A Meta-Analysis

        </article-title>
      </title-group>
      <contrib-group>
        <contrib contrib-type="author" xlink:type="simple">
          <name name-style="western">
            <surname>Xiaoshun</surname>
            <given-names>Shi</given-names>
          </name>
          <xref ref-type="aff" rid="aff1">
            <sup>1</sup>
          </xref>
          <xref ref-type="corresp" rid="cor1">
            <sup>*</sup>
          </xref>
        </contrib>
        <contrib contrib-type="author" xlink:type="simple">
          <name name-style="western">
            <surname>Fuxi</surname>
            <given-names>Huang</given-names>
          </name>
          <xref ref-type="aff" rid="aff2">
            <sup>2</sup>
          </xref>
          <xref ref-type="corresp" rid="cor1">
            <sup>*</sup>
          </xref>
        </contrib>
        <contrib contrib-type="author" xlink:type="simple">
          <name name-style="western">
            <surname>Allen</surname>
            <given-names>M. Chen</given-names>
          </name>
          <xref ref-type="aff" rid="aff3">
            <sup>3</sup>
          </xref>
        </contrib>
        <contrib contrib-type="author" xlink:type="simple">
          <name name-style="western">
            <surname>Zhuolin</surname>
            <given-names>Wu</given-names>
          </name>
          <xref ref-type="aff" rid="aff4">
            <sup>4</sup>
          </xref>
        </contrib>
        <contrib contrib-type="author" xlink:type="simple">
          <name name-style="western">
            <surname>Qianqian</surname>
            <given-names>Huang</given-names>
          </name>
          <xref ref-type="aff" rid="aff5">
            <sup>5</sup>
          </xref>
        </contrib>
        <contrib contrib-type="author" xlink:type="simple">
          <name name-style="western">
            <surname>Ying</surname>
            <given-names>Liang</given-names>
          </name>
          <xref ref-type="aff" rid="aff1">
            <sup>1</sup>
          </xref>
        </contrib>
        <contrib contrib-type="author" xlink:type="simple">
          <name name-style="western">
            <surname>Qipeng</surname>
            <given-names>Zhou</given-names>
          </name>
          <xref ref-type="aff" rid="aff6">
            <sup>6</sup>
          </xref>
        </contrib>
        <contrib contrib-type="author" xlink:type="simple">
          <name name-style="western">
            <surname>Haiyun</surname>
            <given-names>Mo</given-names>
          </name>
          <xref ref-type="aff" rid="aff7">
            <sup>7</sup>
          </xref>
        </contrib>
        <contrib contrib-type="author" xlink:type="simple">
          <name name-style="western">
            <surname>Xiaoxiang</surname>
            <given-names>Li</given-names>
          </name>
          <xref ref-type="aff" rid="aff1">
            <sup>1</sup>
          </xref>
        </contrib>
        <contrib contrib-type="author" xlink:type="simple">
          <name name-style="western">
            <surname>Jiexia</surname>
            <given-names>Zhang</given-names>
          </name>
          <xref ref-type="aff" rid="aff1">
            <sup>1</sup>
          </xref>
        </contrib>
      </contrib-group>
      <aff id="aff6">
        <addr-line>Department of Respiratory Medicine, Shantou Central Hospital, Shantou, China</addr-line>
      </aff>
      <aff id="aff2">
        <addr-line>Department of Oncology, Panyu Central Hospital, Cancer Institute of Panyu, Guangzhou, China</addr-line>
      </aff>
      <aff id="aff3">
        <addr-line>Department of Mathematics, University of California, Berkeley, USA</addr-line>
      </aff>
      <aff id="aff4">
        <addr-line>Department of Biomedical Engineering, University of Minnesota, Twin Cities, USA</addr-line>
      </aff>
      <aff id="aff5">
        <addr-line>Department of Hospital Infection Control, Affiliated Cancer Hospital &amp;amp; Institute of Guangzhou Medical University, Guangzhou, China</addr-line>
      </aff>
      <aff id="aff7">
        <addr-line>Department of Health Care, Maternal and Child Health Hospital of Haizhu District, Guangzhou, China</addr-line>
      </aff>
      <aff id="aff1">
        <addr-line>National Clinical Research Center for Respiratory Disease, State Key Laboratory of Respiratory Disease, Department of Medicine, Guangzhou Institute of Respiratory Disease, The First Affiliated Hospital of Guangzhou Medical University, Guangzhou, China</addr-line>
      </aff>
      <author-notes>
        <corresp id="cor1">
          * E-mail:<email>sxs917@163.com(XS)</email>;<email>fuxihuang2006@126.com(FH)</email>;
        </corresp>
      </author-notes>
      <pub-date pub-type="epub">
        <day>20</day>
        <month>12</month>
        <year>2017</year>
      </pub-date>
      <volume>07</volume>
      <issue>04</issue>
      <fpage>117</fpage>
      <lpage>129</lpage>
      <history>
        <date date-type="received">
          <day>11,</day>
          <month>October</month>
          <year>2017</year>
        </date>
        <date date-type="rev-recd">
          <day>17,</day>
          <month>December</month>
          <year>2017</year>
        </date>
        <date date-type="accepted">
          <day>21,</day>
          <month>December</month>
          <year>2017</year>
        </date>
      </history>
      <permissions>
        <copyright-statement>&#169; Copyright  2014 by authors and Scientific Research Publishing Inc. </copyright-statement>
        <copyright-year>2014</copyright-year>
        <license>
          <license-p>This work is licensed under the Creative Commons Attribution International License (CC BY). http://creativecommons.org/licenses/by/4.0/</license-p>
        </license>
      </permissions>
      <abstract>
        <p>


          Background:
          Emerging evidence indicates that chemotherapy for lung cancer may alter EGFR mutation status. However, whether chemotherapy as a firstline treatment may increase or reduce the frequency of EGFR mutations in NSCLC remains uncertain. Therefore, we conducted a meta-analysis to evaluate whether chemotherapy leads to altered EGFR mutation status. <b>Methods:</b> A systematic literature search was performed using the PubMed, OVID, Science Direct, Cochrane Library, and CNKI databases for studies on pre- and post-chemotherapy EGFR mutation status. Relevant studies documenting perichemotherapy EGFR mutation ratios were included. Analyses of pooled odds ratios (OR) were performed. <b>Results:</b> Six studies involving 656 patients were included in this meta-analysis. It was found that chemotherapy may alter EGFR status (OR = 1.93, 95% CI 1.05 - 3.56; p &lt; 0.0001). No significant differences in EGFR mutation alterations were observed in terms of gender, smoking history, EGFR loci, or chemotherapy response in NSCLC patients. <b>Conclusions:</b> Chemotherapy may contribute to altered EGFR status. NSCLC patients with EGFR mutations might need to be considered for EGFR status redeterminations prior to second-line EGFR-TKI treatment or upon tumor recurrence after chemotherapy. Further randomized clinical trials should investigate the impact of neoadjuvant or first-line chemotherapy on EGFR mutation status in NSCLC patients.

        </p>
      </abstract>
      <kwd-group>
        <kwd>EGFR Mutation</kwd>
        <kwd> Chemotherapy</kwd>
        <kwd> Non-Small Cell Lung Cancer</kwd>
        <kwd> Me-ta-Analysis</kwd>
      </kwd-group>
    </article-meta>
  </front>
  <body>
    <sec id="s1">
      <title>1. Background</title>
      <p>
        Lung cancer causes the majority of cancer deaths in China and worldwide [<xref ref-type="bibr" rid="scirp.81209-ref1">1</xref>] . Sensitive mutations of the epidermal growth factor receptor (EGFR) have been proven to be highly responsive to EGFR tyrosine kinase inhibitors (EGFR-TKIs) compared to standard chemotherapy [<xref ref-type="bibr" rid="scirp.81209-ref2">2</xref>] [<xref ref-type="bibr" rid="scirp.81209-ref3">3</xref>] in non-small cell lung cancer (NSCLC). However, EGFR-TKIs such as gefitinib or erlotinib are sometimes reserved for second-line or maintenance therapy in clinical practice. The somatic mutation status of the EGFR gene is a crucial biomarker for evaluating the application of EGFR-TKI treatment in patients with metastatic and chemo-resistant NSCLC.
      </p>
      <p>
        Recent studies have investigated whether EGFR mutations may be altered by chemotherapy. The efficacy of EGFR-TKIs has been shown to be less potent when used as second-line treatment for NSCLC patients refractory to or intolerant of platinum-based combination chemotherapy [<xref ref-type="bibr" rid="scirp.81209-ref4">4</xref>] . On the other hand, some clinical studies have demonstrated increased serum EGFR mutation detection [<xref ref-type="bibr" rid="scirp.81209-ref5">5</xref>] [<xref ref-type="bibr" rid="scirp.81209-ref6">6</xref>] . In 2012, Honda et al. [<xref ref-type="bibr" rid="scirp.81209-ref7">7</xref>] reported a Japanese woman with an initial EGFR mutation (L747-T751 deletion in exon 19) that disappeared after chemotherapy. The same year, an oncological study by Bai et al. reported that chemotherapy may reduce the frequency of EGFR mutations in NSCLC patients [<xref ref-type="bibr" rid="scirp.81209-ref8">8</xref>] . Since then, the consideration of altered EGFR mutation status before and after chemotherapy has been tightly linked to the second-line EGFR-TKI treatment of NSCLC, prompting investigations by oncologists into the underlining mechanisms.
      </p>
      <p>The aim of the present study was to systemically combine data from published articles to evaluate the impact of chemotherapy on EGFR mutation status in NSCLC. This meta-analysis is the first attempt to assess the role of chemotherapy in EGFR mutation alterations after standard chemotherapy, using evidence- based methods.</p>
    </sec>
    <sec id="s2">
      <title>2. Methods</title>
      <sec id="s2_1">
        <title>2.1. Literature Search</title>
        <p>Relevant studies in English and Chinese were extracted from the PubMed, OVID, Science Direct, Cochrane Library, and China National Knowledge Infrastructure (CNKI) databases using the following terms: “non-small cell lung cancer”, “NSCLC”, “carcinoma”, “neoplasm”, “EGFR mutation”, and “chemotherapy”. The final search was conducted on June 24, 2016. All non-English and non-Chinese articles were excluded. To identify possible outcomes from unpublished trials containing potentially useful data, we also reviewed abstract books and presentations from major recent meetings of the American Society of Clinical Oncology (ASCO), the European Society for Medical Oncology (ESMO), and the World Conference on Lung Cancer. When the same patients were included in different publications, the most recent study was selected.</p>
      </sec>
      <sec id="s2_2">
        <title>2.2. Selection Criteria</title>
        <p>Eligible studies were gathered based on the following inclusion criteria: 1) standard chemotherapy as first-line treatment in chemo-na&#239;ve or radio-na&#239;ve NSCLC patients, 2) EGFR mutation status before and after chemotherapy, 3) any EGFR mutation subtype, 4) standard chemotherapy defined as platinum- based third-generation doublets, and 5) publication in English or Chinese. The exclusion criteria were: 1) duplicate reports, conference abstracts or papers, editorials, or reviews and 2) studies with insufficient data for pooled analysis.</p>
      </sec>
      <sec id="s2_3">
        <title>2.3. Data Extraction</title>
        <p>To identify all eligible research, two investigators (Xiaoshun Shi and Haiyun Mo) independently extracted the data and reached a consensus based on the inclusion criteria. The quality of each study was assessed using the Newcastle Ottawa Quality Assessment Scale. Cases of disagreement were resolved by discussion with a third author. The following information was extracted from the eligible studies: first author’s surname, publication year, geographic region, chemotherapy agents used, EGFR detection method, and number of EGFR mutations before and after chemotherapy.</p>
      </sec>
      <sec id="s2_4">
        <title>2.4. Statistical Analysis</title>
        <p>
          Analysis for the forest plot was conducted using Review Manager 5.2 (Cochrane Collaboration, Oxford, UK). For predictable heterogeneity, pooled odds ratios (ORs) were calculated for all included parameters and presented by random effect models, as this generates wider confidence intervals and minimizes the risk of Type I errors. Heterogeneity among studies was evaluated with Cochran’s Q test and the I<sup>2</sup> statistic. For the subgroup analysis with high heterogeneity, we used both the random-effect model and the fixed-effect model to examine the final conclusion. Publication bias was assessed by Egger’s test. The analysis of publication bias was done with STATA version 12.0. Additionally, the trim-and-fill method was used to adjust the risk estimates when the tests for publication bias were statistically significant [<xref ref-type="bibr" rid="scirp.81209-ref20">20</xref>] , which were also analyzed by using STATA version 12.0. P-values of &lt;0.05 were considered statistically significant.
        </p>
      </sec>
    </sec>
    <sec id="s3">
      <title>3. Results</title></sec>
      <sec id="s3_1">
        <title>3.1. Study Description</title>
        <p>
          A total of 4983 articles were identified in the initial literature search, of which 4970 were rejected based on the exclusion criteria. Two articles were excluded because they belonged to conference abstracts and were subgroups in one of the included articles [<xref ref-type="bibr" rid="scirp.81209-ref8">8</xref>] . Studies with duplicate results, those not documenting EGFR mutation status in the peri-chemotherapy period, and those containing insufficient data for pooled analysis were also excluded. Finally, six articles were identified as eligible for this meta-analysis (<xref ref-type="table" rid="table1">Table 1</xref>). The total number of patients evaluated before and after chemotherapy was 656. All NSCLC stages were accepted in this meta-analysis. All patients included in the analysis were chemo- na&#239;ve or radio-na&#239;ve prior to the detection of EGFR mutation status. ORs were extracted or calculated from each study (<xref ref-type="fig" rid="fig1">Figure 1</xref>).
        </p>
        <table-wrap id="table1" >
          <label>
            <xref ref-type="table" rid="table1">Table 1</xref>
          </label>
          <caption>
            <title> Characteristics of included prospective studies for meta-analysis</title>
          </caption>
          </table-wrap>
        </sec>
      </body>
          <back>
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