<?xml version="1.0" encoding="UTF-8"?><!DOCTYPE article  PUBLIC "-//NLM//DTD Journal Publishing DTD v3.0 20080202//EN" "http://dtd.nlm.nih.gov/publishing/3.0/journalpublishing3.dtd"><article xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink" dtd-version="3.0" xml:lang="en" article-type="research article"><front><journal-meta><journal-id journal-id-type="publisher-id">AE</journal-id><journal-title-group><journal-title>Advances in Entomology</journal-title></journal-title-group><issn pub-type="epub">2331-1991</issn><publisher><publisher-name>Scientific Research Publishing</publisher-name></publisher></journal-meta><article-meta><article-id pub-id-type="doi">10.4236/ae.2016.41005</article-id><article-id pub-id-type="publisher-id">AE-62888</article-id><article-categories><subj-group subj-group-type="heading"><subject>Articles</subject></subj-group><subj-group subj-group-type="Discipline-v2"><subject>Biomedical&amp;Life Sciences</subject></subj-group></article-categories><title-group><article-title>
 
 
  Characterization of Allele Diversity in a Microsatellite Locus: A Registry for &lt;i&gt;Solenopsis invicta&lt;/i&gt;
 
</article-title></title-group><contrib-group><contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>odrigo</surname><given-names>Fernando de Souza</given-names></name><xref ref-type="aff" rid="aff1"><sup>1</sup></xref><xref ref-type="corresp" rid="cor1"><sup>*</sup></xref></contrib><contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Fernando</surname><given-names>Kamimura Cocchi</given-names></name><xref ref-type="aff" rid="aff2"><sup>2</sup></xref></contrib><contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Cíntia</surname><given-names>Martins</given-names></name><xref ref-type="aff" rid="aff3"><sup>3</sup></xref></contrib><contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Maria</surname><given-names>Santina de Castro Morini</given-names></name><xref ref-type="aff" rid="aff1"><sup>1</sup></xref></contrib><contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Odair</surname><given-names>Correa Bueno</given-names></name><xref ref-type="aff" rid="aff2"><sup>2</sup></xref></contrib></contrib-group><aff id="aff2"><addr-line>Centro de Estudos de Insetos Sociais, Instituto de Biociências, Campus Rio Claro, Universidade Estadual Paulista Julio de Mesquita Filho, Rio Claro, Brasil</addr-line></aff><aff id="aff3"><addr-line>Campus Ministro Reis Veloso, Universidade Federal do Piauí, Parnaíba, Brasil</addr-line></aff><aff id="aff1"><addr-line>Núcleo de Ciências Ambientais, Universidade de Mogi das Cruzes, Mogi das Cruzes, Brasil</addr-line></aff><author-notes><corresp id="cor1">* E-mail:<email>souza_bio@yahoo.com.br(OFDS)</email>;</corresp></author-notes><pub-date pub-type="epub"><day>30</day><month>11</month><year>2015</year></pub-date><volume>04</volume><issue>01</issue><fpage>32</fpage><lpage>36</lpage><history><date date-type="received"><day>5</day>	<month>December</month>	<year>2015</year></date><date date-type="rev-recd"><day>accepted</day>	<month>18</month>	<year>January</year>	</date><date date-type="accepted"><day>21</day>	<month>January</month>	<year>2016</year></date></history><permissions><copyright-statement>&#169; Copyright  2014 by authors and Scientific Research Publishing Inc. </copyright-statement><copyright-year>2014</copyright-year><license><license-p>This work is licensed under the Creative Commons Attribution International License (CC BY). http://creativecommons.org/licenses/by/4.0/</license-p></license></permissions><abstract><p>
 
 
  The genus 
  Solenopsis includes more than 100 species in the New World. When introduced, some species cause serious harm to the native wildlife and agriculture. Two forms of social organization are known in the genus, namely, monogyne and polygyne. Here, we present the genetic profile of a 
  Solenopsis invicta Buren 1972 colony recorded in the central region of the city of S
  &amp;atilde;o Paulo, S
  &amp;atilde;o Paulo state, Brazil (23
  &amp;deg
  ;33'37.18&quot;S; 46
  &amp;deg
  ;42'48.66&quot;W) to describe allele diversity. Eight microsatellite loci were used for the analysis of 30 worker ants. The results show the presence of seven alleles genotyped at the same microsatellite locus. Because this is an unusual finding, all of the alleles were sequenced, and surprisingly, an eighth allele was identified. These data suggest that the intracolonial genetic profile of fire ants must be investigated more frequently because there may be unexpected, albeit unknown, genetic patterns for 
  S. invicta that can help inform better control and management programs.
 
</p></abstract><kwd-group><kwd>Fire Ants</kwd><kwd> Intracolonial</kwd><kwd> Microsatellites</kwd><kwd> Alleles</kwd></kwd-group></article-meta></front><body><sec id="s1"><title>1. Introduction</title><p>The genus Solenopsis Westwood 1840 is known in Brazil as formiga-lava-p&#233;, or simply as lava-p&#233;s or formiga-de-fogo (fire ant). This genus includes approximately 216 species, of which 108 occur in the New World [<xref ref-type="bibr" rid="scirp.62888-ref1">1</xref>] [<xref ref-type="bibr" rid="scirp.62888-ref2">2</xref>] . The species are omnivorous and opportunistic, feeding on insects and other alive or dead small invertebrates, as well as on plant matter [<xref ref-type="bibr" rid="scirp.62888-ref3">3</xref>] .</p><p>Native from South America, Solenopsis invicta Buren (1972) was accidentally introduced in many countries and has become a great public concern, causing serious damage to crops, livestock, native biodiversity, and human health [<xref ref-type="bibr" rid="scirp.62888-ref4">4</xref>] -[<xref ref-type="bibr" rid="scirp.62888-ref7">7</xref>] . The potential global range expansion of S. invicta has been correlated with temperature and precipitation, and abrupt variations of these factors may limit the success of the expansion [<xref ref-type="bibr" rid="scirp.62888-ref4">4</xref>] .</p><p>There are two known forms of social organization in S. invicta: monogyne and polygyne. Monogyne social form is headed by single egg-laying queens, whereas polygyne social form contains multiple egg-laying queens [<xref ref-type="bibr" rid="scirp.62888-ref8">8</xref>] . Polygyne colonies have a greater impact than the monogyne colonies because they have high population densities and consume a large amount of organic matter [<xref ref-type="bibr" rid="scirp.62888-ref9">9</xref>] .</p><p>Analyzing the genetic profile of native or introduced populations may assist in the understanding and planning of more effective control strategies. Introduced populations of potentially invasive ants show marked differences in their biology compared with native populations, such as changes in behavior, social organization, reproductive biology, and genetic profile [<xref ref-type="bibr" rid="scirp.62888-ref10">10</xref>] .</p><p>The intracolony genetic profile is seldom explored because genetic analyses of microsatellite markers in the genus Solenopsis using few individuals (between 1 and 10) per colony [<xref ref-type="bibr" rid="scirp.62888-ref11">11</xref>] -[<xref ref-type="bibr" rid="scirp.62888-ref13">13</xref>] may hide internal diversity and influence conclusions regarding the species’ social and reproductive dynamics. In many cases, these studies require individual analyses of worker ants from the same colony [<xref ref-type="bibr" rid="scirp.62888-ref14">14</xref>] .</p><p>The objective of this study was to determine the intracolony allele diversity of S. invicta by analyzing eight microsatellite loci. The bioecology of this species is well studied, but genetic information is still scarce in the areas of natural occurrence.</p></sec><sec id="s2"><title>2. Methods</title><p>The S. invicta colony was collected in the central region of the city of S&#227;o Paulo, S&#227;o Paulo state, Brazil (23˚33'37.18&quot;S; 46˚42'48.66&quot;W), and the worker ants were subjected to DNA barcoding [<xref ref-type="bibr" rid="scirp.62888-ref15">15</xref>] -[<xref ref-type="bibr" rid="scirp.62888-ref17">17</xref>] . Social condition was investigated using two sets of primers described by Valles and Porter [<xref ref-type="bibr" rid="scirp.62888-ref18">18</xref>] -26BS (5’- CTCGCCGATTCTAACGAAGGA-3’), 16BAS (5’-ATGTATACTTTAAAGCATTCCTAATATTTTGTC-3’), 24bS (5’-TGGAGCTGATTATGATGAAGAGAAAATA-3’) and 25bAS (5’- GCTGTTTTTAATTGCATTTCTTATGCAG-3’); and Ross et al. [<xref ref-type="bibr" rid="scirp.62888-ref12">12</xref>] -Gp-9.for (5’- GGAGCTGATTATGATGAAGAGAAAAT-3’), Gp-9.rev (5’-AGCACAGCTTCAGCTGCTAAGA-3’), all_b.rev (5’-AGCACAGCTTCAGCTGCTAAGAT-3’) and all_b.for (5’-GGAGCTGATTATGATGAAGAGAAAATA- 3’). Eight microsatellite loci were analysed in 30 ants using the Multiplex system with primers described by Krieger and Keller [<xref ref-type="bibr" rid="scirp.62888-ref19">19</xref>] . Fluorescence labeling was manufactured by Applied Biosystems TM. Samples were genotyped by capillary electrophoresis in an ABI 3130 automatic sequencer (Applied Biosystems TM) and analyzed using the Genemapper<sup>&#174;</sup> application (Applied Biosystems TM). The alleles of the most polymorphic locus were cloned into competent bacteria and subsequently sequenced for sequence confirmation and stutter occurrence verification.</p></sec><sec id="s3"><title>3. Results and Discussion</title><p>Sequencing showed that the mtDNA of ten analyzed worker ants showed 99% similarity with S. invicta haplotype 41 deposited in GenBank (access number AY950736.1). Amplification with primers for social condition showed that the colony is monogyne and that the number of microsatellite alleles varied from one to seven for the eight loci (<xref ref-type="table" rid="table1">Table 1</xref>).</p><p>Alleles in the most polymorphic locus (Sol 55) were sequenced and compared with the sequence deposited in GenBank (AF002236.1) (<xref ref-type="fig" rid="fig1">Figure 1</xref>). The genotyping error was plus or minus one base pair. The sequences and respective alleles, together with the GenBank accession number, are as follows: sequence 146-genotyped as allele 147 (KP734174); sequence 150-genotyped as allele 149 (KP734172); sequence 152-genotyped as allele 153 (KP734171); sequence 154-genotyped as allele 155 (KP734173), sequence 158-genotyped as allele 157 (KP734169); sequence 160-genotyped as allele 161 (KP734168); and sequence 164-genotyped as allele 163 (KP734170). An additional allele was recorded during genotyping; this allele has the same primer sequences but</p><table-wrap id="table1" ><label><xref ref-type="table" rid="table1">Table 1</xref></label><caption><title> Allele number and frequency of the eight microsatellite loci identified in a Solenopsis invicta nest in S&#227;o Paulo. The alleles used in sequencing characterization are highlighted</title></caption><table><tbody><thead><tr><th align="center" valign="middle" >Locus</th><th align="center" valign="middle" >Allele Number</th><th align="center" valign="middle"  colspan="2"  >Frequency</th><th align="center" valign="middle" ></th><th align="center" valign="middle" ></th><th align="center" valign="middle" ></th><th align="center" valign="middle" ></th><th align="center" valign="middle" ></th></tr></thead><tr><td align="center" valign="middle" >Locus 11</td><td align="center" valign="middle" >1</td><td align="center" valign="middle" >153</td><td align="center" valign="middle" ></td><td align="center" valign="middle" ></td><td align="center" valign="middle" ></td><td align="center" valign="middle" ></td><td align="center" valign="middle" ></td><td align="center" valign="middle" ></td></tr><tr><td align="center" valign="middle" ></td><td align="center" valign="middle" ></td><td align="center" valign="middle" >(1.0)</td><td align="center" valign="middle" ></td><td align="center" valign="middle" ></td><td align="center" valign="middle" ></td><td align="center" valign="middle" ></td><td align="center" valign="middle" ></td><td align="center" valign="middle" ></td></tr><tr><td align="center" valign="middle" >Locus 18</td><td align="center" valign="middle" >4</td><td align="center" valign="middle" >123</td><td align="center" valign="middle" >125</td><td align="center" valign="middle" >127</td><td align="center" valign="middle" >129</td><td align="center" valign="middle" ></td><td align="center" valign="middle" ></td><td align="center" valign="middle" ></td></tr><tr><td align="center" valign="middle" ></td><td align="center" valign="middle" ></td><td align="center" valign="middle" >(0.14)</td><td align="center" valign="middle" >(0.31)</td><td align="center" valign="middle" >(0.41)</td><td align="center" valign="middle" >(0.14)</td><td align="center" valign="middle" ></td><td align="center" valign="middle" ></td><td align="center" valign="middle" ></td></tr><tr><td align="center" valign="middle" >Locus 20</td><td align="center" valign="middle" >4</td><td align="center" valign="middle" >125</td><td align="center" valign="middle" >127</td><td align="center" valign="middle" >129</td><td align="center" valign="middle" >131</td><td align="center" valign="middle" ></td><td align="center" valign="middle" ></td><td align="center" valign="middle" ></td></tr><tr><td align="center" valign="middle" ></td><td align="center" valign="middle" ></td><td align="center" valign="middle" >(0.11)</td><td align="center" valign="middle" >(0.28)</td><td align="center" valign="middle" >(0.10)</td><td align="center" valign="middle" >(0.51)</td><td align="center" valign="middle" ></td><td align="center" valign="middle" ></td><td align="center" valign="middle" ></td></tr><tr><td align="center" valign="middle" >Locus 6</td><td align="center" valign="middle" >6</td><td align="center" valign="middle" >109</td><td align="center" valign="middle" >111</td><td align="center" valign="middle" >113</td><td align="center" valign="middle" >115</td><td align="center" valign="middle" >117</td><td align="center" valign="middle" >119</td><td align="center" valign="middle" ></td></tr><tr><td align="center" valign="middle" ></td><td align="center" valign="middle" ></td><td align="center" valign="middle" >(0.22)</td><td align="center" valign="middle" >(0.12)</td><td align="center" valign="middle" >(0.18)</td><td align="center" valign="middle" >(0.13)</td><td align="center" valign="middle" >(0.05)</td><td align="center" valign="middle" >(0.30)</td><td align="center" valign="middle" ></td></tr><tr><td align="center" valign="middle" >Locus 42</td><td align="center" valign="middle" >5</td><td align="center" valign="middle" >99</td><td align="center" valign="middle" >115</td><td align="center" valign="middle" >121</td><td align="center" valign="middle" >123</td><td align="center" valign="middle" >131</td><td align="center" valign="middle" ></td><td align="center" valign="middle" ></td></tr><tr><td align="center" valign="middle" ></td><td align="center" valign="middle" ></td><td align="center" valign="middle" >(0.24)</td><td align="center" valign="middle" >(0.22)</td><td align="center" valign="middle" >(0.30)</td><td align="center" valign="middle" >(0.10)</td><td align="center" valign="middle" >(0.14)</td><td align="center" valign="middle" ></td><td align="center" valign="middle" ></td></tr><tr><td align="center" valign="middle" >Locus 52</td><td align="center" valign="middle" >2</td><td align="center" valign="middle" >190</td><td align="center" valign="middle" >194</td><td align="center" valign="middle" ></td><td align="center" valign="middle" ></td><td align="center" valign="middle" ></td><td align="center" valign="middle" ></td><td align="center" valign="middle" ></td></tr><tr><td align="center" valign="middle" ></td><td align="center" valign="middle" ></td><td align="center" valign="middle" >(0.85)</td><td align="center" valign="middle" >(0.15)</td><td align="center" valign="middle" ></td><td align="center" valign="middle" ></td><td align="center" valign="middle" ></td><td align="center" valign="middle" ></td><td align="center" valign="middle" ></td></tr><tr><td align="center" valign="middle" >Locus 55</td><td align="center" valign="middle" >7</td><td align="center" valign="middle" >147</td><td align="center" valign="middle" >149</td><td align="center" valign="middle" >153</td><td align="center" valign="middle" >155</td><td align="center" valign="middle" >157</td><td align="center" valign="middle" >161</td><td align="center" valign="middle" >163</td></tr><tr><td align="center" valign="middle" ></td><td align="center" valign="middle" ></td><td align="center" valign="middle" >(0.08)</td><td align="center" valign="middle" >(0.30)</td><td align="center" valign="middle" >(0.14)</td><td align="center" valign="middle" >(0.12)</td><td align="center" valign="middle" >(0.16)</td><td align="center" valign="middle" >(0.14)</td><td align="center" valign="middle" >(0.06)</td></tr><tr><td align="center" valign="middle" >Locus 49</td><td align="center" valign="middle" >5</td><td align="center" valign="middle" >152</td><td align="center" valign="middle" >156</td><td align="center" valign="middle" >158</td><td align="center" valign="middle" >160</td><td align="center" valign="middle" >162</td><td align="center" valign="middle" ></td><td align="center" valign="middle" ></td></tr><tr><td align="center" valign="middle" ></td><td align="center" valign="middle" ></td><td align="center" valign="middle" >(0.14)</td><td align="center" valign="middle" >(0.32)</td><td align="center" valign="middle" >(0.14)</td><td align="center" valign="middle" >(0.05)</td><td align="center" valign="middle" >(0.35)</td><td align="center" valign="middle" ></td><td align="center" valign="middle" ></td></tr></tbody></table></table-wrap><fig id="fig1"  position="float"><label><xref ref-type="fig" rid="fig1">Figure 1</xref></label><caption><title> Sequences of the seven alleles identified in locus Sol55 in a Solenopsis invicta colony. The GB sequence refers to the GenBank sequence (AF002236.1) used to compare the identified alleles. Sequence 166 (red) corresponds to an unexpected allele</title></caption><graphic mimetype="image"   position="float"  xlink:type="simple"  xlink:href="http://html.scirp.org/file/5-1270131x7.png"/></fig><p>a higher number of dinucleotide repeats (TC). This sequence, 166 (KP734175), is highlighted in red in <xref ref-type="fig" rid="fig1">Figure 1</xref>.</p><p>The number of alleles described in six of the eight loci analyzed was higher than expected for a haplodiploid crossing in a monogyne nest. The high number of alleles in the loci may be explained by a crossing between a queen ant with several males [<xref ref-type="bibr" rid="scirp.62888-ref20">20</xref>] . This situation has been observed only in introduced populations, and the first report was in South America, a region of natural occurrence. However, there are other possibilities: 1) the primers used were not efficient in detecting social condition, see [<xref ref-type="bibr" rid="scirp.62888-ref8">8</xref>] ; 2) the colony likely has more than one queen ant; or 3) the only mtDNA lineage found among the worker ants investigated may be evidence of a young nest founded by pleometrosis, with the queen ants still cooperating [<xref ref-type="bibr" rid="scirp.62888-ref21">21</xref>] .</p><p>Allele 166 may have been considered a stutter, and therefore, it does not appear in genotyping. Alleles 164 and 166 differ by only two bases (C and T); it is possible that the source of allele 166 is associated with a replication error or other genetic mechanisms such as an insertion [<xref ref-type="bibr" rid="scirp.62888-ref22">22</xref>] . Consequently, the frequency determined was low, which hampered correct identification through fluorescence labeling.</p></sec><sec id="s4"><title>4. Conclusion</title><p>The results of this study show that thorough colony analyses may reveal characteristics not explored in population analyses. The S. invicta populations reported in Brazil are considered to be evolutionarily and regionally independent and, possibly, many social behavior characteristics of native populations are unknown [<xref ref-type="bibr" rid="scirp.62888-ref23">23</xref>] . Increasing our knowledge of the diversity of the colony’s social and genetic mechanisms may contribute to the development of control plans for this and other potentially invasive species. Moreover, these results may function as a warning or may alert researchers to the use of higher numbers of specimens in new studies of social insects to determine actual diversity.</p></sec><sec id="s5"><title>Cite this paper</title><p>Rodrigo Fernando deSouza,Fernando KamimuraCocchi,C&#237;ntiaMartins,Maria Santina de CastroMorini,Odair CorreaBueno, (2016) Characterization of Allele Diversity in a Microsatellite Locus: A Registry for Solenopsis invicta. Advances in Entomology,04,32-36. doi: 10.4236/ae.2016.41005</p></sec><sec id="s6"><title>NOTES</title></sec></body><back><ref-list><title>References</title><ref id="scirp.62888-ref1"><label>1</label><mixed-citation publication-type="other" xlink:type="simple">Bolton, B., Alpert, G., Ward, P.S. and Naskrecki, P. (2006) Bolton Catalogue of Ants of the World: 1758-2005. 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