<?xml version="1.0" encoding="UTF-8"?><!DOCTYPE article  PUBLIC "-//NLM//DTD Journal Publishing DTD v3.0 20080202//EN" "http://dtd.nlm.nih.gov/publishing/3.0/journalpublishing3.dtd"><article xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink" dtd-version="3.0" xml:lang="en" article-type="research article"><front><journal-meta><journal-id journal-id-type="publisher-id">AJPS</journal-id><journal-title-group><journal-title>American Journal of Plant Sciences</journal-title></journal-title-group><issn pub-type="epub">2158-2742</issn><publisher><publisher-name>Scientific Research Publishing</publisher-name></publisher></journal-meta><article-meta><article-id pub-id-type="doi">10.4236/ajps.2015.619312</article-id><article-id pub-id-type="publisher-id">AJPS-61930</article-id><article-categories><subj-group subj-group-type="heading"><subject>Articles</subject></subj-group><subj-group subj-group-type="Discipline-v2"><subject>Biomedical&amp;Life Sciences</subject></subj-group></article-categories><title-group><article-title>
 
 
  Field Application of the Mycorrhizal Fungus &lt;i&gt;Rhizophagus irregularis&lt;/i&gt; Increases the Yield of Wheat Crop and Affects Soil Microbial Functionalities
 
</article-title></title-group><contrib-group><contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>anâa</surname><given-names>Wahbi</given-names></name><xref ref-type="aff" rid="aff1"><sup>1</sup></xref></contrib><contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Yves</surname><given-names>Prin</given-names></name><xref ref-type="aff" rid="aff2"><sup>2</sup></xref></contrib><contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Tasnime</surname><given-names>Maghraoui</given-names></name><xref ref-type="aff" rid="aff1"><sup>1</sup></xref></contrib><contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Hervé</surname><given-names>Sanguin</given-names></name><xref ref-type="aff" rid="aff2"><sup>2</sup></xref></contrib><contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Jean</surname><given-names>Thioulouse</given-names></name><xref ref-type="aff" rid="aff3"><sup>3</sup></xref></contrib><contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Khalid</surname><given-names>Oufdou</given-names></name><xref ref-type="aff" rid="aff4"><sup>4</sup></xref></contrib><contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Mohamed</surname><given-names>Hafidi</given-names></name><xref ref-type="aff" rid="aff5"><sup>5</sup></xref></contrib><contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Robin</surname><given-names>Duponnois</given-names></name><xref ref-type="aff" rid="aff1"><sup>1</sup></xref></contrib></contrib-group><aff id="aff1"><addr-line>IRD, UMR LSTM, Montpellier, France</addr-line></aff><aff id="aff3"><addr-line>Laboratoire de Biométrie et Biologie Evolutive, Université Lyon 1, Villeurbanne, France</addr-line></aff><aff id="aff5"><addr-line>Laboratoire Ecologie &amp;amp; Environnement (Unité Associée au CNRST, URAC 32), Faculté des Sciences Semlalia,
Université Cadi Ayyad, Marrakech, Maroc</addr-line></aff><aff id="aff2"><addr-line>CIRAD, UMR LSTM, Montpellier, France</addr-line></aff><aff id="aff4"><addr-line>Laboratoire de Biologie et de Biotechnologie des Microorganisms, Faculté des Sciences Semlalia, Université
Cadi Ayyad, Marrakech, Maro</addr-line></aff><pub-date pub-type="epub"><day>02</day><month>12</month><year>2015</year></pub-date><volume>06</volume><issue>19</issue><fpage>3205</fpage><lpage>3215</lpage><history><date date-type="received"><day>30</day>	<month>October</month>	<year>2015</year></date><date date-type="rev-recd"><day>accepted</day>	<month>13</month>	<year>December</year>	</date><date date-type="accepted"><day>16</day>	<month>December</month>	<year>2015</year></date></history><permissions><copyright-statement>&#169; Copyright  2014 by authors and Scientific Research Publishing Inc. </copyright-statement><copyright-year>2014</copyright-year><license><license-p>This work is licensed under the Creative Commons Attribution International License (CC BY). http://creativecommons.org/licenses/by/4.0/</license-p></license></permissions><abstract><p>
 
 
  The aim of this study was to test the impact of 
  Rhizophagus irregularis, an arbuscular mycorrhizal fungus (AMF), on durum wheat growth and soil microbial functionalities in a field inoculation trial conducted in Morocco. The results showed that i) the 
  R. irregularis inoculum effectively improved wheat growth, ii) wheat growth promotion depended on the soil mycorrhizal infectivity and iii) functional abilities of soil microflora depended on AMF inoculation. This study confirms that field AMF inoculation can be proposed as an effective agronomic practice in wheat production and as a sustainable cultural practice to manage soil biofunctioning. To fully promote inoculation practices, a better knowledge of AMF ecology has to be acquired to better adapt AMF inoculation to environmental conditions, and thus warrant better yields and agricultural sustainability.
 
</p></abstract><kwd-group><kwd>Arbuscular Mycorrhizal Fungi</kwd><kwd> Field-Grown Wheat</kwd><kwd> Mycorrhizal Field Inoculation</kwd><kwd> Nutrient Uptake</kwd><kwd> Microbial Soil Functions</kwd></kwd-group></article-meta></front><body><sec id="s1"><title>1. Introduction</title><p>It is well known that Arbuscular Mycorrhizal Fungi (AMF) play a major role in the biofunctioning of natural and agricultural ecosystems. AMF form symbiotic relationships with most of indigenous and cultivated plant species in terrestrial environments by increasing the nutrient uptake efficiency of plants in exchange of photosynthetically fixed carbon [<xref ref-type="bibr" rid="scirp.61930-ref1">1</xref>] . In addition to these nutritional benefits, AMF are also known to increase soil structure, reduce diseases, affect the diversity of plant communities [<xref ref-type="bibr" rid="scirp.61930-ref2">2</xref>] - [<xref ref-type="bibr" rid="scirp.61930-ref4">4</xref>] and influence relationships between plants [<xref ref-type="bibr" rid="scirp.61930-ref5">5</xref>] - [<xref ref-type="bibr" rid="scirp.61930-ref7">7</xref>] . In addition, mycorrhizal symbiosis alters root functions and microbial equilibrium in the rhizos- phere [<xref ref-type="bibr" rid="scirp.61930-ref8">8</xref>] [<xref ref-type="bibr" rid="scirp.61930-ref9">9</xref>] . This zone influenced by both the roots and the mycorrhizal symbiont has been named “mycor- rhizosphere” [<xref ref-type="bibr" rid="scirp.61930-ref10">10</xref>] [<xref ref-type="bibr" rid="scirp.61930-ref11">11</xref>] and included the more specific term “hyphosphere” which only referred to the zone surrounding individual fungal hyphae [<xref ref-type="bibr" rid="scirp.61930-ref12">12</xref>] . The “mycorrhizosphere effect”, resulting from fungal activities, modifies the structure and the functionalities of soil microbial communities [<xref ref-type="bibr" rid="scirp.61930-ref13">13</xref>] . Numerous studies have reported that AMF and soil microflora can interact synergistically leading to plant growth stimulation [<xref ref-type="bibr" rid="scirp.61930-ref14">14</xref>] .</p><p>Hence AMF offer a large potential to increase agricultural yields and productivity in a low-input manner. However, a significant part of the knowledge about AMF functions results from laboratory experiments in which plants are cultivated in sterilized soil inoculated or not with particular AMF strains. This experimental approach excludes indigenous AMF that could alter plant response or compete with the AMF inoculant [<xref ref-type="bibr" rid="scirp.61930-ref15">15</xref>] [<xref ref-type="bibr" rid="scirp.61930-ref16">16</xref>] . In addition, these studies ignore the functional complexity of the soil biological community that could interact with the fungal inoculant and influence the establishment of the AMF symbiosis and its impact on the plant development [<xref ref-type="bibr" rid="scirp.61930-ref17">17</xref>] [<xref ref-type="bibr" rid="scirp.61930-ref18">18</xref>] .</p><p>Wheat is one of the most important cereal crops in the world in terms of cultivated area [<xref ref-type="bibr" rid="scirp.61930-ref19">19</xref>] and durum wheat (Triticum turgidum L. var durum) is the main cereal grown in the Mediterranean regions [<xref ref-type="bibr" rid="scirp.61930-ref20">20</xref>] . It is mostly grown under stressful conditions in the Mediterranean region, where drought and heat stress usually constrain yield potential during the grain filling period [<xref ref-type="bibr" rid="scirp.61930-ref21">21</xref>] . Wheat is classified as non-mycotrophic or mycotrophic depending on the cultivars [<xref ref-type="bibr" rid="scirp.61930-ref22">22</xref>] . Although many field studies have addressed the possibility of increasing wheat nutrient uptake, growth and yield by AMF inoculation [<xref ref-type="bibr" rid="scirp.61930-ref23">23</xref>] , very few have been performed along the south side of the Mediterranean Basin and more particularly in Morocco. In addition, little is known with regards to the impacts of AMF application on the native soil microbial functions.</p><p>In the present study, we conducted a field trial aiming to answer to the following questions:</p><p>1) Does AMF inoculation increase wheat growth, nutrient uptake and grain yield?</p><p>2) Are an increased mycorrhizal colonization and an extended soil hyphal length linked to changes in wheat growth, nutrient uptake and grain yield?</p><p>3) Is the impact of AMF inoculation on wheat growth, nutrient uptake and grain yield dependent on the native AMF abundance and infectivity (mycorrhizal soil infectivity)?</p><p>4) Does AMF inoculation impact the native soil microbial functions involved in the main soil geochemical cycles (P and N)?</p></sec><sec id="s2"><title>2. Materials and Methods</title><sec id="s2_1"><title>2.1. Field Conditions and Experimental Design</title><p>A field trial was performed in the 2011-2013 growing seasons in the Haouz plain at about 30 km at the West of Marrakech (31˚4'60&quot; N and 7˚3'0&quot; W, Morocco). Soil chemical properties (0 - 0.10 m layer) were as follows: pH (H<sub>2</sub>O) 7.2; carbon (%) 1.54; nitrogen (%) 0.08, C/N 19.2; Total P (mg∙kg<sup>−1</sup>) 502.9 and Olsen P (mg∙kg<sup>−1</sup>) 22.1. The climate of the experimental site is semiarid Mediterranean, with a mean annual rainfall of 282 mm, mostly in Autumn/Winter (59%) and in Spring (22%). The dry season is from May to September. The mean air temperature is 17.9˚C in Autumn, 12.8˚C in Winter, 18.5˚C in Spring, and 24.7˚C in Summer. Soil, cropped in the previous growing season with durum wheat (Triticum durum Desf.), was plowed to a depth of 0.30 m in Summer and then shallowly harrowed to control weeds. No herbicide nor chemical fertilizers were applied. The experimental design had a randomized block design with one factor and four replication blocks. The factor was the direct AMF inoculation or not (control). Plots were 3.0 m &#215; 3.0 m; each main plot was spaced 1.0 m out from the next. Inoculation with AMF included the application of the commercial AMF inoculum (Inoculum plus™). This spore inoculum including R. irregularis (2 &#215; 10<sup>4</sup> spores per gram of inoculum) and peat was mixed with a disinfected sand (120˚C, 20 min) to obtain a total spore density of 40 spores∙g<sup>−1</sup>.</p><p>Durum wheat was sown in December 2011 and 2012 at a rate of 400 viable seeds∙m<sup>−2</sup> in rows 0.18 m apart. The experimental plot consisted of four rows 3 m long. Weeds were controlled by hand during the experiment. At sowing, five grams of the AMF inoculum (200 spores of R. irregularis) were placed in each planting rows at 0.20 m intervals.</p></sec><sec id="s2_2"><title>2.2. Plant Analysis</title><p>After one and two growing seasons, at wheat tillering, the total number of wheat plant and spike per plot were counted. Then ten randomly chosen plants in the middle of the plot were harvested. The seeds from each plant were collected, counted and weighed to determine the dry weight of 1000 seeds (grain yield). The aerial parts of each plant were then oven dried at 70˚C during 2 weeks and weighed. After drying, shoot tissues were ground, ashed (500˚C), digested in 2 ml HCl 6N and 10 ml HNO<sub>3</sub> N for nitrogen and then analyzed by colorimetry for phosphorus [<xref ref-type="bibr" rid="scirp.61930-ref24">24</xref>] . For nitrogen determination (Kjeldahl method), they were digested in 15 ml H<sub>2</sub>SO<sub>4</sub> (36 N) containing 50 g∙l<sup>−1</sup> of salicylic acid. Roots from five other randomly chosen plants in the middle of each plot were sampled and root subsamples of about 3 g each were taken. Each subsample was stained with 0.05% trypan blue in lactic acid according to Phillips and Hayman [<xref ref-type="bibr" rid="scirp.61930-ref25">25</xref>] ; root colonization by AMF was then measured with the grid intersect method according to Giovannetti and Mosse [<xref ref-type="bibr" rid="scirp.61930-ref26">26</xref>] .</p><p>Inoculation effectiveness (IE) of AMF inoculation on plant yield was calculated based according to the following formula:</p><disp-formula id="scirp.61930-formula306"><graphic  xlink:href="http://html.scirp.org/file/21-2602425x7.png"  xlink:type="simple"/></disp-formula><p>with +M, inoculated plants; −M, non-inoculated plants.</p></sec><sec id="s2_3"><title>2.3. Soil Microbial Analysis</title><p>After one and two growing seasons, soil cores (1 kg) were collected at 0- to 10-cm depth in each plot. About 10 soil samples were taken from each plot and pooled together. Soil samples were crushed and passed through a 2-mm sieve. Then hyphal length was measured by the filtration-grid-line method [<xref ref-type="bibr" rid="scirp.61930-ref27">27</xref>] .</p><p>Patterns of in situ catabolic potential (ISCP) were designed to determine the functions of soil microbial communities and the microbial functional diversity in soil treatments after one and two growing seasons [<xref ref-type="bibr" rid="scirp.61930-ref28">28</xref>] . With a micro-respirometry method carried out in 96-well microtiter plates [<xref ref-type="bibr" rid="scirp.61930-ref29">29</xref>] , 28 organic substrates (3 wells per substrate) were tested; Thirteen carbohydrates (D-mannose, D-mannitol, D-trehalose, L-arabinose, D-xylose, D- sucrose, D-galactose, meso-inositol, D-sorbitol, L-rhamnose, L-arabitol, mesoerythriol, D-Glucose), 8 carboxylic acids (citric acid, maleic acid, D,L-malic acid, oxalic acid, Na-glucomate, α-ketoglutaric acid, L-ascorbic acid) and 7 amino acids (L-asparagine, D,L-valine, L-methionine, L-glutamine, D,L-alanine, D,L-serine, N- acetyl-D-Glucosamine). Detection plates were prepared according to the MicroResp™ recommendations, and data were recorded by using a Tecan infinite M200 Plate Absorbance reader (Absorbance measured at 572 nm). For each well, the absolute respiratory activity was determined by subtracting the absorbance value at t0 to the value after 6 days of incubation at 27˚C in the dark (t6). The average basal respiration value was then subtracted to all the individual substrate respiration values. For each organic substrate, the substrate-specific respiratory activity was averaged and the value was finally divided by the sum of all the mean substrate specific respiratory activities (p<sub>i</sub> value). The catabolic evenness (E) was calculated to determine the catabolic diversity of soil treatments. It represents the variability of catabolized substrates amongst the range of the targeted substrates and is calculated using the Simpson-Yule index <inline-formula><inline-graphic xlink:href="http://html.scirp.org/file/21-2602425x8.png" xlink:type="simple"/></inline-formula> with p<sub>i</sub> = (respiration response to individual substrates)/ (total respiration activity induced by all substrates for a soil treatment) [<xref ref-type="bibr" rid="scirp.61930-ref30">30</xref>] . The catabolic evenness could be used to evaluate the ability of microbial communities to resist against environmental stress or disturbance [<xref ref-type="bibr" rid="scirp.61930-ref30">30</xref>] . Data were calculated for the individual responses to substrates but also for the average responses with carbohydrates, carboxylic acids and amino acids.</p></sec><sec id="s2_4"><title>2.4. Assessment of the Mycorrhizal Soil Infectivity</title><p>The mycorrhizal soil infectivity was estimated according to Kisa et al. [<xref ref-type="bibr" rid="scirp.61930-ref31">31</xref>] . Four dilutions of each soil sample were made by thoroughly mixing the original cultural soil substrate with the same soil but autoclaved (120˚C, 40 min). The levels of dilution (undisinfected soil/disinfected soil) were: 100%, 50%, 25% and 0% (v:v). Three replicates were prepared for each dilution. Seeds of durum wheat were surface sterilized with 10% sodium hypochlorite, washed with sterile distilled water (120˚C, 20 min) and pre-germinated for 2 days in Petri dishes on humid filter paper. One germinated seed was then transplanted into each of 100 mL pots filled with 100 g of different soil dilution. The pots were placed in a glasshouse under natural light (day length approximately 10 h, mean temperature 22˚C) and watered daily with deionized water. After one month of growth, seedlings were uprooted and their entire root systems were washed under tap water. For each pot, the extent of AM colonization was assessed as described above.</p></sec><sec id="s2_5"><title>2.5. Statistical Analysis</title><p>All the data were subjected to a two-way analysis of variance and comparisons among means were made using the Newman-Keuls test (P &lt; 0.05). The percentages of the mycorrhizal colonization were transformed by arcsin(sqrt) before the statistical analysis. To evaluate the mycorrhizal soil infectivity, the relationships between the extent of AM colonization and soil dilutions were analyzed using mixed effects linear regression models. The p-values for model fits were obtained by ANOVA [<xref ref-type="bibr" rid="scirp.61930-ref32">32</xref>] . Computations were conducted with the R software [<xref ref-type="bibr" rid="scirp.61930-ref33">33</xref>] , using the “NLME” package [<xref ref-type="bibr" rid="scirp.61930-ref34">34</xref>] . In the regression models, the fixed effects were the soil origin and the level of dilution (undisinfected soil/disinfected soil: 1, 1/2, 1/4, 0).</p></sec></sec><sec id="s3"><title>3. Results</title><sec id="s3_1"><title>3.1. Wheat Nutrient Uptake, Growth and Grain Yield</title><p>After one growing year, AMF application did not impact the total biomass yield, the spike number per ha, the dry weight of 1000 seeds (grain yield) (<xref ref-type="table" rid="table1">Table 1</xref>). In contrast, a positive effect of the AMF inoculation was recorded after two years of cultivation on the wheat growth and on the grain yield as well as the wheat phosphorus uptake (<xref ref-type="table" rid="table1">Table 1</xref>). The inoculation effectiveness was of 22.5% for the total biomass yield per ha, 29.3% for the spike number per ha and 7.7% for the grain yield (<xref ref-type="table" rid="table1">Table 1</xref>).</p></sec><sec id="s3_2"><title>3.2. Wheat Mycorrhizal Colonization and Soil Functionalities</title><p>The mycorrhizal colonization of wheat plants and the hyphal length were not significantly impacted by the AMF inoculation after one growing year whereas they significantly improved after two growing seasons (<xref ref-type="table" rid="table1">Table 1</xref>).</p><p>After two years of cultivation, the catabolic evenness of the soils amended with the AMF inoculum were significantly higher than those calculated for the not inoculated treatments. The highest standardized average respi-</p><table-wrap id="table1" ><label><xref ref-type="table" rid="table1">Table 1</xref></label><caption><title> Effects of R. irregularis application on total biomass yield (kg∙ha<sup>−1</sup>), spike number per ha, dry weight spike (kg∙ha<sup>−1</sup>), thousand-seed weight (TSW), mineral nutrition and mycorrhizal colonization of durum wheat one year (2012) and two years (2013) after the AMF inoculation in the field experiment located in the Haouz valley at about 30 km at the West of Marrakech (Morocco)</title></caption><table><tbody><thead><tr><th align="center" valign="middle"  rowspan="3"  ></th><th align="center" valign="middle"  colspan="4"  >Treatments</th></tr></thead><tr><td align="center" valign="middle"  colspan="2"  >Control</td><td align="center" valign="middle"  colspan="2"  >+ R. irregularis</td></tr><tr><td align="center" valign="middle" >2012</td><td align="center" valign="middle" >2013</td><td align="center" valign="middle" >2012</td><td align="center" valign="middle" >2013</td></tr><tr><td align="center" valign="middle" >Total biomass Yield (kg∙ha<sup>−1</sup>)</td><td align="center" valign="middle" >4312 (20.4)<sup>(1)</sup> a<sup>(2)</sup></td><td align="center" valign="middle" >4184 (28.7)a</td><td align="center" valign="middle" >4662 (25.6)a</td><td align="center" valign="middle" >5401 (71.6)b</td></tr><tr><td align="center" valign="middle" >Spike number per ha (&#215;10<sup>4</sup>)</td><td align="center" valign="middle" >177.1 (27.5) a</td><td align="center" valign="middle" >167.3 (29.1)a</td><td align="center" valign="middle" >227.7 (18.8)b</td><td align="center" valign="middle" >236.7 (26.9)b</td></tr><tr><td align="center" valign="middle" >Thousand-seed weight</td><td align="center" valign="middle" >42.3 (2.5) a</td><td align="center" valign="middle" >41.7 (2.8)a</td><td align="center" valign="middle" >42.7 (2.5)a</td><td align="center" valign="middle" >45.2 (2.5)b</td></tr><tr><td align="center" valign="middle" >Shoot N content (%)</td><td align="center" valign="middle" >nd<sup>(3)</sup></td><td align="center" valign="middle" >5.31 (0.60)a</td><td align="center" valign="middle" >nd</td><td align="center" valign="middle" >5.39 (0.11)a</td></tr><tr><td align="center" valign="middle" >Shoot P content (mg∙g<sup>−</sup><sup>1</sup>)</td><td align="center" valign="middle" >nd</td><td align="center" valign="middle" >6.25 (0.91)a</td><td align="center" valign="middle" >nd</td><td align="center" valign="middle" >7.62 (0.29)b</td></tr><tr><td align="center" valign="middle" >Mycorrhizal colonization (%)</td><td align="center" valign="middle" >46.7 (5.8)a</td><td align="center" valign="middle" >54.7 (4.7)a</td><td align="center" valign="middle" >53.9 (5.6)a</td><td align="center" valign="middle" >66.9 (3.9) b</td></tr><tr><td align="center" valign="middle" >Hyphal length (m∙g<sup>−</sup><sup>1</sup> dry soil)</td><td align="center" valign="middle" >1.66 (0.08)a</td><td align="center" valign="middle" >1.83 (0.09)a</td><td align="center" valign="middle" >1.72 (0.07)a</td><td align="center" valign="middle" >2.89 (0.07)b</td></tr></tbody></table></table-wrap><p><sup>(1)</sup>Standard error. <sup>(2)</sup>For each year, data in the same line followed by the same letter are not significantly different according to the Newman-Keul’s test (p &lt; 0.05). <sup>(3)</sup>nd = not determined.</p><p>ration SIRs (Substrate Induced Respirations) to amino-acids and carboxylic acids were recorded in the AMF inoculated treatments after 1 and 2 growing seasons except for the amino-acid group for the second growing year (<xref ref-type="table" rid="table2">Table 2</xref>). The AMF inoculation gave very different patterns of in situ catabolic potential (ISCP) (<xref ref-type="fig" rid="fig1">Figure 1</xref>). The substrates preferentially used in samples collected from the AMF treatments compared to the control were alanine, glutamine, asparagine, Na-glutamate, ascorbic acid, ketoglutaric acid, oxalic acid, gluconic acid, malic acid, maleic acid and citric acid for the first year of cultivation whereas for the secong growing season, the highest SIR responses were recorded in the AMF inoculated soil with ascorbic acid, ketoglutaric acid, malic acid, maleic acid and citric acid (<xref ref-type="fig" rid="fig1">Figure 1</xref>).</p><p>The regression model between the extent of AM colonization and soil dilutions for the four different treatments showed that the treatment and the percentage of soil dilution both had very strong effects (P &lt; 0.0001). The differences between the control and the AMF inoculated treatment were only significant after two growing years (P &lt; 0.001) (<xref ref-type="fig" rid="fig2">Figure 2</xref>).</p></sec></sec><sec id="s4"><title>4. Discussion</title><p>From the results of this study, the following three main points deserve discussion: i) whether the R. irregularis application was effective in improving the wheat growth, ii) whether the enhancement of wheat growth depended on the mycorrhizal soil infectivity and iii) whether functional abilities of soil microflora depended on AMF inoculation.</p><p>1) Field survey of wheat soils predicted that AMF would have the ability to colonize wheat roots at early stages of crop development [<xref ref-type="bibr" rid="scirp.61930-ref35">35</xref>] [<xref ref-type="bibr" rid="scirp.61930-ref36">36</xref>] . The positive effect of R. irregularis inoculation on wheat development is in accordance with previous studies where it has been shown that this fungal isolate was very efficient on the growth of other plant species in controlled conditions [<xref ref-type="bibr" rid="scirp.61930-ref31">31</xref>] [<xref ref-type="bibr" rid="scirp.61930-ref37">37</xref>] [<xref ref-type="bibr" rid="scirp.61930-ref38">38</xref>] and in field conditions [<xref ref-type="bibr" rid="scirp.61930-ref13">13</xref>] . In the present study, AMF field inoculation increased aboveground biomass (+22%) supporting results from mycorrhizal pots experiments that show a mean increase of 18% [<xref ref-type="bibr" rid="scirp.61930-ref36">36</xref>] [<xref ref-type="bibr" rid="scirp.61930-ref39">39</xref>] [<xref ref-type="bibr" rid="scirp.61930-ref40">40</xref>] . Our results showed an increase of 18% for the P concentration in shoot biomass. This is in accordance with previous studies have reported that field AMF inoculation significantly increased P concentration in aboveground biomass (16%) [<xref ref-type="bibr" rid="scirp.61930-ref23">23</xref>] . In our study, the variety of the wheat seeds was unknown as one of our objectives was to test the local seed resources usually used. It is well known that new varieties of many annual crops are more responsive to AMF colonization than ancestral genotypes [<xref ref-type="bibr" rid="scirp.61930-ref41">41</xref>] . It would be useful to compare the inoculation effectiveness on different durum wheat varieties and more particularly on wheat varieties in order to optimize the benefits expected from the AMF inoculation.</p><p>2) Positive wheat responses to AMF inoculation was positively correlated with the highest mycorrhizal root colonization root and the highest mycorrhizal soil infectivity. It has been reported that AMF inoculation increased root colonization by 29% leading to a significant plant biomass increase of 23% [<xref ref-type="bibr" rid="scirp.61930-ref17">17</xref>] [<xref ref-type="bibr" rid="scirp.61930-ref42">42</xref>] . These results suggest that the expected benefits on the crop yield mainly result from an increase in AMF abundance, rather than the introduction of new fungal strains [<xref ref-type="bibr" rid="scirp.61930-ref42">42</xref>] . Our results corroborate this evidence that inoculation efficiency is mainly related to abundance, rather than identity effects.</p><table-wrap id="table2" ><label><xref ref-type="table" rid="table2">Table 2</xref></label><caption><title> Catabolic evenness and standardized average substrate-induced respiration (SIR) responses with each substrate group (carboxylic acids, amino-acids and carbohydrates) in the soils inoculated or not with Rhizophagus irregularis one year (2012) and two years (2013) after the AMF inoculation</title></caption><table><tbody><thead><tr><th align="center" valign="middle"  rowspan="3"  ></th><th align="center" valign="middle"  colspan="4"  >Treatments</th></tr></thead><tr><td align="center" valign="middle"  colspan="2"  >Control</td><td align="center" valign="middle"  colspan="2"  >+ R. irregularis</td></tr><tr><td align="center" valign="middle" >2012</td><td align="center" valign="middle" >2013</td><td align="center" valign="middle" >2012</td><td align="center" valign="middle" >2013</td></tr><tr><td align="center" valign="middle" >Catabolic evenness</td><td align="center" valign="middle" >12.38 (1.75)<sup>(1)</sup> a<sup>(2)</sup></td><td align="center" valign="middle" >13.76 (0.71)a</td><td align="center" valign="middle" >13.57 (0.41)a</td><td align="center" valign="middle" >14.98 (0.87)b</td></tr><tr><td align="center" valign="middle" >Carbohydrates</td><td align="center" valign="middle" >0.025 (0.005)a</td><td align="center" valign="middle" >0.019 (0.005)a</td><td align="center" valign="middle" >0.033 (0.066)a</td><td align="center" valign="middle" >0.026 (0.002)b</td></tr><tr><td align="center" valign="middle" >Amino-acids</td><td align="center" valign="middle" >0.010 (0.002)a</td><td align="center" valign="middle" >0.008 (0.002)a</td><td align="center" valign="middle" >0.146 (0.035)b</td><td align="center" valign="middle" >0.009 (0.002)a</td></tr><tr><td align="center" valign="middle" >Carboxylic acids</td><td align="center" valign="middle" >0.081 (0.004)a</td><td align="center" valign="middle" >0.078 (0.003)a</td><td align="center" valign="middle" >0.209 (0.031)b</td><td align="center" valign="middle" >0.092 (0.009)b</td></tr></tbody></table></table-wrap><p><sup>(1)</sup>Standard error. <sup>(2)</sup>For each year, data in the same line followed by the same letter are not significantly different according to the Newman-Keul’s test (P &lt; 0.05).</p><fig-group id="fig1"><label><xref ref-type="fig" rid="fig1">Figure 1</xref></label><caption><title> Catabolic response profiles for each soil origin one year (2012) and two years (2013) after the AMF inoculation. Error bars represent standard errors (n = 4). Blue bars, soil inoculated with Rhizophagus irregularis; Red bars, uninoculated soil. An asterisk indicates a significant difference between the two treatments, according to the Newman Keul’s test (P &lt; 0.05).</title></caption><fig id ="fig1_1"><label>(b)</label><graphic mimetype="image"   position="float"  xlink:type="simple"  xlink:href="http://html.scirp.org/file/21-2602425x9.png"/></fig><fig id ="fig1_2"><label></label><graphic mimetype="image"   position="float"  xlink:type="simple"  xlink:href="http://html.scirp.org/file/21-2602425x10.png"/></fig></fig-group><fig id="fig2"  position="float"><label><xref ref-type="fig" rid="fig2">Figure 2</xref></label><caption><title> Regression model between log soil dilutions (original cultural soil inoculated or not with R. irregularis/autoclaved soil mixture, v:v) and the extent of AM colonization (MC) in each cultural treatment. An1Un and An2Un: Uninoculated soil after 1 year and 2 years cultivation, respectively. An1In and An2In: inoculated soil with R. irregularis after 1 year and 2 years cultivation, respectively</title></caption><graphic mimetype="image"   position="float"  xlink:type="simple"  xlink:href="http://html.scirp.org/file/21-2602425x11.png"/></fig><p>3) Microbial catabolic diversity represents another important microbial trait, commonly used to investigate soil functioning [<xref ref-type="bibr" rid="scirp.61930-ref43">43</xref>] . As already reported in previous studies [<xref ref-type="bibr" rid="scirp.61930-ref13">13</xref>] [<xref ref-type="bibr" rid="scirp.61930-ref31">31</xref>] [<xref ref-type="bibr" rid="scirp.61930-ref44">44</xref>] , our results show that AMF inoculation was accompanied with an increase of the soil catabolic eveness. This increase is related to a better soil functioning by enhancing the resistance of soils to stress and disturbance [<xref ref-type="bibr" rid="scirp.61930-ref45">45</xref>] - [<xref ref-type="bibr" rid="scirp.61930-ref47">47</xref>] . The main differences among the patterns of in situ catabolic potential (ISCP) were detected with some carboxylic acids. It is well known that among the identified carboxylic acids, dicarboxylic (oxalic, tartaric, malic, fumaric, malonic acids) and tricarboxylic acids (citric acid) were effective in phosphorus mobilization [<xref ref-type="bibr" rid="scirp.61930-ref48">48</xref>] . It also has been reported that gluconic acid was the most frequent inorganic compound for mineral phosphate solubilisation [<xref ref-type="bibr" rid="scirp.61930-ref49">49</xref>] . SIR responses with all these organic acids were the highest in the AMF inoculation treatment. It suggests that these AMF and their associated hyphosphere microflora excreted higher amounts of such organic acids. These organic compounds could exert a selective influence on soil microbial communities through a multiplication of microorganisms with abilities to catabolize organic acids.</p></sec><sec id="s5"><title>5. Conclusion</title><p>In conclusion, this study confirms that field AMF inoculation can be proposed as an effective agronomic practice in wheat production and in a sustainable cultural practice to manage the soil biofunctioning. In order to fully profit inoculation, a better knowledge on the AMF ecology has to be acquired in order to predict under which environmental conditions, AMF inoculation will promote yield and agricultural sustainability.</p></sec><sec id="s6"><title>Acknowledgements</title><p>This study was funded by the project Fabatropimed supported by Agropolis Foundation under the reference ID 1001-009.</p></sec><sec id="s7"><title>Cite this paper</title><p>San&#226;aWahbi,11,YvesPrin,TasnimeMaghraoui,11,Herv&#233;Sanguin,JeanThioulouse,KhalidOufdou,MohamedHafidi,RobinDuponnois, (2015) Field Application of the Mycorrhizal Fungus Rhizophagus irregularis Increases the Yield of Wheat Crop and Affects Soil Microbial Functionalities. American Journal of Plant Sciences,06,3205-3215. doi: 10.4236/ajps.2015.619312</p></sec><sec id="s8"><title>NOTES</title></sec></body><back><ref-list><title>References</title><ref id="scirp.61930-ref1"><label>1</label><mixed-citation publication-type="other" xlink:type="simple">Smith, S.E. and Read, D.J. (2008) Mycorrhizal Symbiosis. 3rd Edition, Academic Press, Amsterdam.</mixed-citation></ref><ref id="scirp.61930-ref2"><label>2</label><mixed-citation publication-type="other" xlink:type="simple">van der Heijden, M.G.A., Klironomos, J.N., Ursic, M., Moutoglis, P., Streitwolf-Engel, R., Boller, T., Wiemken, A. and Sanders, I.R. (1998) Mycorrhizal Fungal Diversity Determines Plant Biodiversity, Ecosystem Variability and Productivity. Nature, 396, 72-75. http://dx.doi.org/10.1038/23936</mixed-citation></ref><ref id="scirp.61930-ref3"><label>3</label><mixed-citation publication-type="other" xlink:type="simple">Klironomos, J.N., McCune, J., Hart, M. and Neville, J. 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