<?xml version="1.0" encoding="UTF-8"?><!DOCTYPE article  PUBLIC "-//NLM//DTD Journal Publishing DTD v3.0 20080202//EN" "http://dtd.nlm.nih.gov/publishing/3.0/journalpublishing3.dtd"><article xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink" dtd-version="3.0" xml:lang="en" article-type="research article"><front><journal-meta><journal-id journal-id-type="publisher-id">AJAC</journal-id><journal-title-group><journal-title>American Journal of Analytical Chemistry</journal-title></journal-title-group><issn pub-type="epub">2156-8251</issn><publisher><publisher-name>Scientific Research Publishing</publisher-name></publisher></journal-meta><article-meta><article-id pub-id-type="doi">10.4236/ajac.2015.64030</article-id><article-id pub-id-type="publisher-id">AJAC-54593</article-id><article-categories><subj-group subj-group-type="heading"><subject>Articles</subject></subj-group><subj-group subj-group-type="Discipline-v2"><subject>Chemistry&amp;Materials Science</subject></subj-group></article-categories><title-group><article-title>
 
 
  A Method for Detection of Trace Concentrations of Underivatized Amino Acid in Hydrothermal Fluids by Ion-Pairing Reversed-Phase UPLC-ESI-QTOF-MS
 
</article-title></title-group><contrib-group><contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>écile</surname><given-names>Konn</given-names></name><xref ref-type="aff" rid="aff1"><sup>1</sup></xref></contrib><contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Jörgen</surname><given-names>Magnér</given-names></name><xref ref-type="aff" rid="aff2"><sup>2</sup></xref></contrib><contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Jean-Luc</surname><given-names>Charlou</given-names></name><xref ref-type="aff" rid="aff3"><sup>3</sup></xref></contrib><contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Nils</surname><given-names>G. Holm</given-names></name><xref ref-type="aff" rid="aff1"><sup>1</sup></xref></contrib><contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Tomas</surname><given-names>Alsberg</given-names></name><xref ref-type="aff" rid="aff4"><sup>4</sup></xref></contrib></contrib-group><aff id="aff2"><addr-line>IVL Swedish Environmental Research Institute Ltd., SE-10031 Stockholm, Sweden</addr-line></aff><aff id="aff4"><addr-line>Department of Environmental Science and Analytical Chemistry (ACES), Stockholm University, SE-10691 Stockholm, Sweden</addr-line></aff><aff id="aff3"><addr-line>Ifremer, Laboratoire de Géochimieet Métallogénie, F-29280 Plouzané, France</addr-line></aff><aff id="aff1"><addr-line>Department of Geological Sciences, Stockholm University, SE-10691 Stockholm, Sweden</addr-line></aff><pub-date pub-type="epub"><day>28</day><month>02</month><year>2015</year></pub-date><volume>06</volume><issue>04</issue><fpage>313</fpage><lpage>324</lpage><history><date date-type="received"><day>16</day>	<month>January</month>	<year>2015</year></date><date date-type="rev-recd"><day>accepted</day>	<month>9</month>	<year>March</year>	</date><date date-type="accepted"><day>12</day>	<month>March</month>	<year>2015</year></date></history><permissions><copyright-statement>&#169; Copyright  2014 by authors and Scientific Research Publishing Inc. </copyright-statement><copyright-year>2014</copyright-year><license><license-p>This work is licensed under the Creative Commons Attribution International License (CC BY). http://creativecommons.org/licenses/by/4.0/</license-p></license></permissions><abstract><p>
 
 
  Investigation of amino acids in hydrothermal systems is of prime importance for the understanding of geochemistry and microbiology of hydrothermal vents and plumes, for carbon and metals global cycles, for metabolism of some hydrothermal microorganisms and for the origin of life issue. Extensive theoretical and experimental work on amino acids behaviour in hydrothermal fluids has been done, conversely only few data exist on natural samples. Because each hydrothermal vent is unique, the more data we collect the better we will be able to address each of these questions. Usually amino acids in hydrothermal fluids have been measured by HPLC-FLD. The chromatographic separation was at least 26 min and up to 135 min and the required derivatization step may be time consuming, may use harmful chemicals and may be source of contamination. Alternatively, we describe here a method combining quickness (4.5 min), high resolution (10,000), very low LOD (sub-ppb) and without derivatization. Characterisation and separation of 10 relevant proteinogenic underivatized amino acids was achieved by ion-pairing reversed-phase Ultra-high Performance Liquid Chromatography-Electrospray Ionisation-Quadrupole Time of Flight-Mass Spectrometry (UPLC-ESI-QTOF-MS). Excellent linearity in the response was obtained for all amino acids with correlation coefficients &gt; 0.9921. This method was successfully applied to natural hydrothermal fluid samples from ultramafic-hosted vents of the Mid-Atlantic Ridge region. Results are consistent with the only 2 other studies published on ultramafic-hosted vents and complete the few available data.
 
</p></abstract><kwd-group><kwd>Amino Acids</kwd><kwd> UPLC</kwd><kwd> Ion-Pairing</kwd><kwd> QTOF</kwd><kwd> Mass Spectrometry</kwd><kwd> Hydrothermal Fluids</kwd></kwd-group></article-meta></front><body><sec id="s1"><title>1. Introduction</title><p>Excellent and comprehensive discussions on the origin, stability and thermodynamic properties of amino acids in hydrothermal fluids have already been published and we strongly urge the reader to refer to them. In order to introduce these essential references we will begin our introduction with a brief summary of major findings and ideas.</p><p>The study of amino acids in hydrothermal systems is gaining importance as they represent key compounds in many fields of hydrothermal research. 1) Hydrothermal fields appear favourable for prebiotic chemistry and of particular interest amino acids are the first building blocks for the emergence life e.g. [<xref ref-type="bibr" rid="scirp.54593-ref1">1</xref>] -[<xref ref-type="bibr" rid="scirp.54593-ref5">5</xref>] . Especially abiotic synthesis under the high reducing condition (elevated [H<sub>2</sub>]) found in ultramafic-hosted hydrothermal systems is supported by thermodynamics e.g. [<xref ref-type="bibr" rid="scirp.54593-ref6">6</xref>] [<xref ref-type="bibr" rid="scirp.54593-ref7">7</xref>] , experimental e.g. [<xref ref-type="bibr" rid="scirp.54593-ref8">8</xref>] [[<xref ref-type="bibr" rid="scirp.54593-ref9">9</xref>] and references therein] and field data e.g. [<xref ref-type="bibr" rid="scirp.54593-ref10">10</xref>] [<xref ref-type="bibr" rid="scirp.54593-ref11">11</xref>] . Amino acids do occur in hydrothermal fluids and although the presence of a small fraction of abiogenic amino acids has not been excluded, the authors have claimed unanimously they were biogenic (microbial production) or thermogenic (organic matter degradation) [<xref ref-type="bibr" rid="scirp.54593-ref12">12</xref>] -[<xref ref-type="bibr" rid="scirp.54593-ref17">17</xref>] . The occurrence and persistence of amino acids in hydrothermal fluids likely depend on multiple parameters such as pressure, temperature, redox conditions, thermodynamics, kinetics, residence time and microbial activity. Extensive experimental work has been conducted to investigate the stability of amino acids under hydrothermal conditions, yet the conclusion is still unclear e.g. [<xref ref-type="bibr" rid="scirp.54593-ref18">18</xref>] -[<xref ref-type="bibr" rid="scirp.54593-ref21">21</xref>] . A consensus towards stability at short time scales seems to emerge. Notably this life time may be enhanced by mineral surfaces protection [<xref ref-type="bibr" rid="scirp.54593-ref22">22</xref>] . 2) Amino acid metabolism has recently been described as a major metabolic pathway in the deep subsurface biosphere [<xref ref-type="bibr" rid="scirp.54593-ref23">23</xref>] . 3) Amino acids may also reach the hydrothermal plume and thus sustain communities therein. 4) They constitute complexing agent for metals and thus may play a role in their bioavailability and transport through the ocean.</p><p>Amino acid analyses have been carried out for a long time, however their high polarity, low volatility and lack of a strong chromophore group result in strenuous separation and detection. For 60 years many analytical techniques have been developed and have broadened depending on the scientific, industrial and health research needs. One can indeed be interested in measuring the total amount of dissolved free amino acids (DFAA), in separating and identifying them, in quantifying each amino acid or in separating the D to the L forms. Besides, analytical instrumentation has become more and more accurate and efficient over the years leading to the possibility of identifying, quantifying and separating amino acids and configurations in a variety of matrices.</p><p>Main challenges in the analysis of amino acids in hydrothermal fluids are the complexity of the matrix which contains high concentrations of salts and metals [<xref ref-type="bibr" rid="scirp.54593-ref24">24</xref>] [<xref ref-type="bibr" rid="scirp.54593-ref25">25</xref>] and the trace concentrations of amino acids to be detected. Liquid Chromatography-Fluorescence Light Detector (FLD) has typically been used for separating and measuring amino acids in hydrothermal fluids [<xref ref-type="bibr" rid="scirp.54593-ref12">12</xref>] -[<xref ref-type="bibr" rid="scirp.54593-ref17">17</xref>] . Long chromatographic separation times of at least 25 min and up to 135 min were reported. Limits of detection (LOD), although they were &lt; 10 nM in most cases, ranged from 1 to 34 nM depending on the amino acid and resulted in many non-detected amino acids. Finally, the method involves a derivatization step which may be a source of contamination, be time consuming, use harmful chemicals and create reagent interferences. Derivatization also means that the original sample is chemically modified, which, to our point of view, should be avoided when working on little known samples and systems. The need for a method that would be rapid, sensitive and without derivatization appeared of prime importance for the study of amino acids in hydrothermal fluids.</p><p>Analyses of underivatized amino acids are often carried out either by LC or ion chromatography (IC). We will compare various methods in terms of retention times and LOD based on the set of the 10 proteinaceous amino acids chosen for the present work. Analyses by IC with amperometric detection requires extremely long separation time (up to 50 min) and results in too high LOD for our purpose [<xref ref-type="bibr" rid="scirp.54593-ref26">26</xref>] [<xref ref-type="bibr" rid="scirp.54593-ref27">27</xref>] . &#214;zcan and Şenyuva [<xref ref-type="bibr" rid="scirp.54593-ref28">28</xref>] used HPLC-Atmospheric Pressure-Chemical Ionisation-MS and resulted in fast separation but rather low resolution and far too high LOD for our purpose (&gt;100 nM). Many different detectors may be coupled to LC. The best results for different parameters were generally obtained with a MS detector; especially LOD were lowered but not sufficiently for trace analyses [<xref ref-type="bibr" rid="scirp.54593-ref29">29</xref>] [<xref ref-type="bibr" rid="scirp.54593-ref30">30</xref>] . LOD are typically improved by the use of tandem mass spectrometry (MS/MS) or Ultra-high Performance Liquid Chromatography (UPLC). HPLC-MS/MS appeared reasonably fast (5 - 15 min) but LOD were still too high [<xref ref-type="bibr" rid="scirp.54593-ref31">31</xref>] [<xref ref-type="bibr" rid="scirp.54593-ref32">32</xref>] . Similar conditions (10 min, LOD &gt; 10 nM) were obtained by Zhou et al. [<xref ref-type="bibr" rid="scirp.54593-ref33">33</xref>] who used UPLC with a triple quadrupole and a specific column. Elsewhere it has been reported that retention times and thus the response signal of underivatized amino acids could be improved on classic C<sub>18</sub> column by an ion-pairing agent [<xref ref-type="bibr" rid="scirp.54593-ref34">34</xref>] -[<xref ref-type="bibr" rid="scirp.54593-ref36">36</xref>] . These pioneers in ion-pairing HPLC-ESI-MS/MS achieved separation in about 13 min and obtained LOD from 0.03 to 3 &#181;M depending on the amino acid. The technique was used later on but LOD were similar or not reported and retention times were higher [<xref ref-type="bibr" rid="scirp.54593-ref37">37</xref>] [<xref ref-type="bibr" rid="scirp.54593-ref38">38</xref>] . Adaptation of the original method to the current most efficient chromatographic instrument (UPLC) enhanced the analysis time down to 6.5 min [<xref ref-type="bibr" rid="scirp.54593-ref39">39</xref>] . Nevertheless the problem of high LOD remains. To the best of our knowledge and despite the extensive work published on the analyses of underivatized amino acids, a technique that would enable fast separation and detection of underivatized amino acids at trace concentration has not yet been clearly described and validated. The purpose of this paper is to describe a rapid, simple and sensitive method for the analyses of underivatized amino acids in hydrothermal fluids and present some results of natural samples as an illustration. Based on the methods of Piraud et al. [<xref ref-type="bibr" rid="scirp.54593-ref35">35</xref>] and Armstrong et al. [<xref ref-type="bibr" rid="scirp.54593-ref40">40</xref>] , we report here the use of Ultrahigh Performance Liquid Chromatography-Electrospray Ionisation-Quadrupole Time of Flight-Mass Spectrometry (UPLC-ESI-QTOF-MS) to separate and quantify 10 chosen proteinaceous underivatized amino acids faster and at lower detection limits than published results up to date. To be noted Armstrong and coworkers [<xref ref-type="bibr" rid="scirp.54593-ref40">40</xref>] did not published the LOD and LOQ they obtained. We also present an application to natural samples of fluids from ultramafic-hosted hydrothermal vents and report the measured DFAA concentrations.</p></sec><sec id="s2"><title>2. Materials and Methods</title><sec id="s2_1"><title>2.1. Chemicals and Labware</title><p>Amino acid standards were supplied by Merck. The ion pairing agent, heptafluorobutyric acid (HFBA) and HPLC grade acetonitrile were purchased from Sigma-Aldrich. Water was deionized on a Milli-Q system (Milli- Q reagent water system, Molsheim, France) at 18.2 Mohm. All glassware used was oven combusted at 400˚C for 4 h.</p></sec><sec id="s2_2"><title>2.2. Standards</title><p>The consideration of thermodynamic [<xref ref-type="bibr" rid="scirp.54593-ref3">3</xref>] [<xref ref-type="bibr" rid="scirp.54593-ref7">7</xref>] , experimental e.g. [<xref ref-type="bibr" rid="scirp.54593-ref41">41</xref>] -[<xref ref-type="bibr" rid="scirp.54593-ref46">46</xref>] and field data e.g. [<xref ref-type="bibr" rid="scirp.54593-ref13">13</xref>] [<xref ref-type="bibr" rid="scirp.54593-ref14">14</xref>] [<xref ref-type="bibr" rid="scirp.54593-ref17">17</xref>] [<xref ref-type="bibr" rid="scirp.54593-ref47">47</xref>] [<xref ref-type="bibr" rid="scirp.54593-ref48">48</xref>] together with analytical issues (separation, response, retention…) guided the choice of the 10 proteinogenic amino acids that were investigated in the present study. A stock solution comprising of Glutamic acid (Glu), Alanine (Ala), Methionine (Met), Tryptophan (Trp), Proline (Pro), Glycine (Gly), Lysine (Lys), Tyrosine (Tyr), Phenylalanine (Phe) and Leucine (Leu) in Milli-Q water at a concentration of ca. 20 mg∙L<sup>−1</sup> was prepared. The quantity of each amino acid was weighted on an accurate scale and exact concentrations were determined and are given in <xref ref-type="table" rid="table1">Table 1</xref>. Diluted solutions at 1000, 200, 20 and 2 &#181;g∙L<sup>−1</sup> (i.e. ppb) were prepared from this stock solution.</p></sec><sec id="s2_3"><title>2.3. Hydrothermal Fluids Samples</title><p>Hydrothermal fluids were sampled in titanium syringes from the Logatchev and the Ashadze hydrothermal field by the ROV Victor 6000 during the SERPENTINE cruise in winter 2007 and from the Rainbow hydrothermal field by the manned submarine Nautile during MOMARDREAM-naut cruise in summer 2007. Both cruises were conducted by the French research institute for marine sciences, Ifremer. Samples were taken at the nose of smokers to avoid seawater mixing. The accuracy of the sampling was guided by real time records of the tem- perature within the chimneys. However, mixing occurred anyway to some extent. Based on the Mg concentra- tion, the percentage of pure fluid can be calculated. <xref ref-type="table" rid="table2">Table 2</xref> lists the samples used in this study and gives their general characteristics and the proportion of pure fluid. As soon as the fluids were recovered, 10 mL aliquots of the samples were transferred into glass tubes, frozen immediately at −80˚C and stored until analysis. Samples were not filtered to limit the risk of contamination and because of the possibility of cell lysis during pres- sure-filtration. 5 mL of each hydrothermal fluid sample were evaporated at room temperature under a gentle N<sub>2</sub> flux and re-extracted in 100 μL of Milli-Q water. The extracts were then transferred into V-shaped vials and let</p><table-wrap id="table1" ><label><xref ref-type="table" rid="table1">Table 1</xref></label><caption><title> Molecular weight (M), concentration (C) in the standard stock solution and retention time (Rt) of the amino acids analysed in this study. Additionally is given the m/z ratio of the protonated parent ion [M+H]<sup>+</sup> with which each amino acid was identified</title></caption><table><tbody><thead><tr><th align="center" valign="middle" ></th><th align="center" valign="middle" >M (g∙mol<sup>−1</sup>)</th><th align="center" valign="middle" >m/z [M+H]<sup>+</sup></th><th align="center" valign="middle" >C (mg∙L<sup>−1</sup>)</th><th align="center" valign="middle" >Rt (min)</th></tr></thead><tr><td align="center" valign="middle" >GLU</td><td align="center" valign="middle" >147.13</td><td align="center" valign="middle" >148.06</td><td align="center" valign="middle" >20.00</td><td align="center" valign="middle" >1.06</td></tr><tr><td align="center" valign="middle" >ALA</td><td align="center" valign="middle" >89.09</td><td align="center" valign="middle" >90.06</td><td align="center" valign="middle" >19.00</td><td align="center" valign="middle" >1.11</td></tr><tr><td align="center" valign="middle" >MET</td><td align="center" valign="middle" >149.21</td><td align="center" valign="middle" >150.06</td><td align="center" valign="middle" >20.00</td><td align="center" valign="middle" >3.44</td></tr><tr><td align="center" valign="middle" >TRP</td><td align="center" valign="middle" >204.23</td><td align="center" valign="middle" >205.1</td><td align="center" valign="middle" >22.00</td><td align="center" valign="middle" >4.27</td></tr><tr><td align="center" valign="middle" >PRO</td><td align="center" valign="middle" >115.13</td><td align="center" valign="middle" >116.07</td><td align="center" valign="middle" >21.00</td><td align="center" valign="middle" >1.24</td></tr><tr><td align="center" valign="middle" >GLY</td><td align="center" valign="middle" >75.07</td><td align="center" valign="middle" >76.05</td><td align="center" valign="middle" >19.50</td><td align="center" valign="middle" >0.93</td></tr><tr><td align="center" valign="middle" >LYS</td><td align="center" valign="middle" >146.19</td><td align="center" valign="middle" >147.11</td><td align="center" valign="middle" >21.00</td><td align="center" valign="middle" >3.31</td></tr><tr><td align="center" valign="middle" >TYR</td><td align="center" valign="middle" >181.19</td><td align="center" valign="middle" >182.08</td><td align="center" valign="middle" >19.50</td><td align="center" valign="middle" >3.51</td></tr><tr><td align="center" valign="middle" >PHE</td><td align="center" valign="middle" >165.19</td><td align="center" valign="middle" >166.09</td><td align="center" valign="middle" >21.00</td><td align="center" valign="middle" >3.85</td></tr><tr><td align="center" valign="middle" >LEU</td><td align="center" valign="middle" >131.17</td><td align="center" valign="middle" >132.1</td><td align="center" valign="middle" >19.00</td><td align="center" valign="middle" >3.77</td></tr></tbody></table></table-wrap><table-wrap id="table2" ><label><xref ref-type="table" rid="table2">Table 2</xref></label><caption><title> Hydrothermal fluids samples main features. As seawater mixing occurred to some extent, the % of pure fluid is given in the “Fluid” column. The Pre-C column gives how much the samples were concentrated before analyses (in fold). Concentrations are given in nM and refer to the concentration in the natural hydrothermal fluid originally, before preconcentration. A cross stands for detected but not quantified and nd for not detected</title></caption><table><tbody><thead><tr><th align="center" valign="middle" >Sample name</th><th align="center" valign="middle" >Site</th><th align="center" valign="middle" >Depth</th><th align="center" valign="middle" >T</th><th align="center" valign="middle" >pH</th><th align="center" valign="middle" >Cl<sup>−</sup></th><th align="center" valign="middle" >H<sub>2</sub></th><th align="center" valign="middle" >Fluid</th><th align="center" valign="middle" >Pre-C</th><th align="center" valign="middle"  colspan="10"  >C in hydrothermal fluid (nM)</th></tr></thead><tr><td align="center" valign="middle" ></td><td align="center" valign="middle" ></td><td align="center" valign="middle" >(m)</td><td align="center" valign="middle" >(˚C)</td><td align="center" valign="middle" ></td><td align="center" valign="middle" >mM</td><td align="center" valign="middle" >mM</td><td align="center" valign="middle" >%</td><td align="center" valign="middle" >fold</td><td align="center" valign="middle" >Glu</td><td align="center" valign="middle" >Ala</td><td align="center" valign="middle" >Met</td><td align="center" valign="middle" >Trp</td><td align="center" valign="middle" >Pro</td><td align="center" valign="middle" >Gly</td><td align="center" valign="middle" >Lys</td><td align="center" valign="middle" >Tyr</td><td align="center" valign="middle" >Phe</td><td align="center" valign="middle" >Leu</td></tr><tr><td align="center" valign="middle" >MAD-D2-Ti2D</td><td align="center" valign="middle" >seawater</td><td align="center" valign="middle" >2291</td><td align="center" valign="middle" >2</td><td align="center" valign="middle" >7.84</td><td align="center" valign="middle" >550</td><td align="center" valign="middle" >-</td><td align="center" valign="middle" >0</td><td align="center" valign="middle" >30</td><td align="center" valign="middle" >nd</td><td align="center" valign="middle" >3.86</td><td align="center" valign="middle" >nd</td><td align="center" valign="middle" >nd</td><td align="center" valign="middle" >nd</td><td align="center" valign="middle" >nd</td><td align="center" valign="middle" >nd</td><td align="center" valign="middle" >nd</td><td align="center" valign="middle" >nd</td><td align="center" valign="middle" >x</td></tr><tr><td align="center" valign="middle" >MAD-D3-Ti3G</td><td align="center" valign="middle" >Rainbow</td><td align="center" valign="middle" >2307</td><td align="center" valign="middle" >350</td><td align="center" valign="middle" >3.23</td><td align="center" valign="middle" >761</td><td align="center" valign="middle" >-</td><td align="center" valign="middle" >97</td><td align="center" valign="middle" >25</td><td align="center" valign="middle" >nd</td><td align="center" valign="middle" >nd</td><td align="center" valign="middle" >nd</td><td align="center" valign="middle" >x</td><td align="center" valign="middle" >nd</td><td align="center" valign="middle" >nd</td><td align="center" valign="middle" >nd</td><td align="center" valign="middle" >nd</td><td align="center" valign="middle" >nd</td><td align="center" valign="middle" >nd</td></tr><tr><td align="center" valign="middle" >MAD-D6-Ti2G</td><td align="center" valign="middle" >Rainbow</td><td align="center" valign="middle" >2265</td><td align="center" valign="middle" >353</td><td align="center" valign="middle" >3.41</td><td align="center" valign="middle" >711</td><td align="center" valign="middle" >-</td><td align="center" valign="middle" >73</td><td align="center" valign="middle" >40</td><td align="center" valign="middle" >nd</td><td align="center" valign="middle" >nd</td><td align="center" valign="middle" >nd</td><td align="center" valign="middle" >nd</td><td align="center" valign="middle" >nd</td><td align="center" valign="middle" >nd</td><td align="center" valign="middle" >nd</td><td align="center" valign="middle" >nd</td><td align="center" valign="middle" >x</td><td align="center" valign="middle" >x</td></tr><tr><td align="center" valign="middle" >MAD-D8-Ti1D</td><td align="center" valign="middle" >Rainbow</td><td align="center" valign="middle" >2305</td><td align="center" valign="middle" >350</td><td align="center" valign="middle" >3.36</td><td align="center" valign="middle" >703</td><td align="center" valign="middle" >-</td><td align="center" valign="middle" >71</td><td align="center" valign="middle" >25</td><td align="center" valign="middle" >nd</td><td align="center" valign="middle" >nd</td><td align="center" valign="middle" >nd</td><td align="center" valign="middle" >nd</td><td align="center" valign="middle" >x</td><td align="center" valign="middle" >nd</td><td align="center" valign="middle" >nd</td><td align="center" valign="middle" >nd</td><td align="center" valign="middle" >x</td><td align="center" valign="middle" >x</td></tr><tr><td align="center" valign="middle" >SE-D2-Ti2</td><td align="center" valign="middle" >Ashadze 1</td><td align="center" valign="middle" >4088</td><td align="center" valign="middle" >353</td><td align="center" valign="middle" >3.95</td><td align="center" valign="middle" >595</td><td align="center" valign="middle" >14.6</td><td align="center" valign="middle" >76</td><td align="center" valign="middle" >25</td><td align="center" valign="middle" >nd</td><td align="center" valign="middle" >nd</td><td align="center" valign="middle" >nd</td><td align="center" valign="middle" >x</td><td align="center" valign="middle" >nd</td><td align="center" valign="middle" >nd</td><td align="center" valign="middle" >nd</td><td align="center" valign="middle" >nd</td><td align="center" valign="middle" >x</td><td align="center" valign="middle" >0.41</td></tr><tr><td align="center" valign="middle" >SE-D2-Ti3</td><td align="center" valign="middle" >Ashadze 1</td><td align="center" valign="middle" >4088</td><td align="center" valign="middle" >353</td><td align="center" valign="middle" >3.89</td><td align="center" valign="middle" >601</td><td align="center" valign="middle" >6.8</td><td align="center" valign="middle" >81</td><td align="center" valign="middle" >33</td><td align="center" valign="middle" >nd</td><td align="center" valign="middle" >nd</td><td align="center" valign="middle" >nd</td><td align="center" valign="middle" >x</td><td align="center" valign="middle" >nd</td><td align="center" valign="middle" >nd</td><td align="center" valign="middle" >nd</td><td align="center" valign="middle" >nd</td><td align="center" valign="middle" >x</td><td align="center" valign="middle" >0.11</td></tr><tr><td align="center" valign="middle" >SE-D6-Ti1</td><td align="center" valign="middle" >Logatchev 1</td><td align="center" valign="middle" >3021</td><td align="center" valign="middle" >346</td><td align="center" valign="middle" >4.97</td><td align="center" valign="middle" >517</td><td align="center" valign="middle" >10.3</td><td align="center" valign="middle" >71</td><td align="center" valign="middle" >50</td><td align="center" valign="middle" >nd</td><td align="center" valign="middle" >nd</td><td align="center" valign="middle" >nd</td><td align="center" valign="middle" >nd</td><td align="center" valign="middle" >nd</td><td align="center" valign="middle" >nd</td><td align="center" valign="middle" >nd</td><td align="center" valign="middle" >nd</td><td align="center" valign="middle" >x</td><td align="center" valign="middle" >x</td></tr><tr><td align="center" valign="middle" >SE-D7-Ti1-L2</td><td align="center" valign="middle" >Logatchev 2</td><td align="center" valign="middle" >2700</td><td align="center" valign="middle" >308</td><td align="center" valign="middle" >4.44</td><td align="center" valign="middle" >171</td><td align="center" valign="middle" >10.3</td><td align="center" valign="middle" >93</td><td align="center" valign="middle" >50</td><td align="center" valign="middle" >nd</td><td align="center" valign="middle" >nd</td><td align="center" valign="middle" >nd</td><td align="center" valign="middle" >nd</td><td align="center" valign="middle" >nd</td><td align="center" valign="middle" >nd</td><td align="center" valign="middle" >nd</td><td align="center" valign="middle" >nd</td><td align="center" valign="middle" >x</td><td align="center" valign="middle" >x</td></tr></tbody></table></table-wrap><p>sit until salts and precipitates would sediment. Finally, the supernatant was sampled with a glass Pasteur pipette, poured into an additional V-shaped vial and analysed. To be noted, only the DFAA will be detected with the current sample preparation approach.</p></sec><sec id="s2_4"><title>2.4. Analyses</title><p>Amino acids were characterised by UPLC-ESI-QTOF-MS [<xref ref-type="bibr" rid="scirp.54593-ref49">49</xref>] . The ACQUITY UPLC<sup>&#174;</sup> instrument (Waters, Milford, USA) coupled to a Micromass quadrupole time of flight (QTOF Premier) high resolution mass spectrometer (Waters, Manchester, UK). Compounds were separated on a BEH C<sub>18</sub> 1.7 &#181;m, 2.1 &#215; 50 mm column (Waters) at a flow rate of 250 &#181;L/min. Mobile phase A was a solution of 10mM HFBA in (95/5) (v/v) (water/ acetonitrile) and mobile phase B was a solution of 10 mM HFBA in (5/95) (v/v) (water/acetonitrile). A gradient elution comprising of 7 steps was performed as follows: the mobile phases ratio (A:B) was (100:0) for 2 min; linear ramp to (80:20) in 0.5 min and held for 3 min; linear ramp to (0:100) in 2 min and held for 3 min; linear ramp back to (100:0) in 0.5 min and held for 5 min; which makes up the total run time to 16 min. The mass spectrometer was operated in the positive ion mode and the MS parameters were set as follows: Capillary voltage 3.0 kV, Sampling cone 25 V, extraction cone 4 V, source temperature 100˚C, desolvation temperature 350˚C and collision energy 2.0. Automated injections were performed by the ACQUITY UPLC<sup>&#174;</sup> Sample Manager. The protonated molecule [M+H]<sup>+</sup>, of which the values of the mass to charge ratio (m/z) are given in <xref ref-type="table" rid="table1">Table 1</xref>, was used as the selected ion for compound identification in a mass window of 0.05 Da. The selected amino acids were quantified using the manual integration feature of the MassLynxV4.1 software (Waters, Milford, MA, USA).</p></sec><sec id="s2_5"><title>2.5. Calibration</title><p>Amino acids can be positively or negatively charged which allows the use of either a positive or a negative mode for MS detection. In the present study, ion-pairing agent HFBA was used as an additive in the mobile phase to enhance the retention of amino acids. HFBA is a strong acid, with a pKa value &lt; 2 which ensures all the amino acids to be protonated and therefore easily detected in positive mode. Also, the acidic HFBA will compete for charges with the amino acids in the ion-source and contribute to the overall ion-suppression in negative mode. In addition, amino acids are detected with higher sensitivities in the positive mode than in the negative mode [<xref ref-type="bibr" rid="scirp.54593-ref50">50</xref>] . The positive mode detection appeared thus most suitable. Finally, characterisation and retention of amino acids was confirmed by injection of 1000 ppb standard solutions of each amino acid separately.</p><p>Calibration was designed to investigate linearity at lowest possible concentrations as amino acids were suspected to occur at levels &lt; 1 nM in natural samples [<xref ref-type="bibr" rid="scirp.54593-ref12">12</xref>] [<xref ref-type="bibr" rid="scirp.54593-ref14">14</xref>] -[<xref ref-type="bibr" rid="scirp.54593-ref16">16</xref>] . However, Gly was detectable only at rela- tively high concentration compared to the other amino acids and therefore two stronger concentrations were also injected for calibration which consists of the following injections: 2, 4 and 10 μL of the 2 ppb solution; 2, 4, 8 and 10 μL of the 20 ppb solution; 10 μL of the 200 and 1000 ppb solutions. The 1000 ppb solution was also used as an external standard and was run on a regular basis over a day of analyses for control of retention times and peak intensity. Concentrations of the standards were normalised to a 10 μL injected volume, so that linear ranges and LOD correspond to an injection of 10 μL. The linear ranges reported here have been restrained to the domain of concentrations of interest and therefore the upper limit of linearity should not be considered as the highest one. LOD were calculated and correspond to a signal to noise ratio (S/N) of 3.</p></sec></sec><sec id="s3"><title>3. Results and Discussion</title><sec id="s3_1"><title>3.1. Chromatography and Separation</title><p>Several gradients, chromatographic conditions and ion-pairing agents were investigated before the optimum compromise was reached. Under these conditions (see Materials and Methods) the 10 amino acids investigated in the present work were easily detected and retained (see retention time [Rt] in <xref ref-type="table" rid="table1">Table 1</xref>). Separation was achieved in less than 4.5 min with very nice peak shapes (<xref ref-type="fig" rid="fig1">Figure 1</xref>); being about 3 times faster than with HPLC which is a common feature [<xref ref-type="bibr" rid="scirp.54593-ref35">35</xref>] [<xref ref-type="bibr" rid="scirp.54593-ref51">51</xref>] -[<xref ref-type="bibr" rid="scirp.54593-ref53">53</xref>] . This is also faster than other work using UPLC [<xref ref-type="bibr" rid="scirp.54593-ref33">33</xref>] [<xref ref-type="bibr" rid="scirp.54593-ref39">39</xref>] [<xref ref-type="bibr" rid="scirp.54593-ref40">40</xref>] .</p></sec><sec id="s3_2"><title>3.2. Linearity and LOD</title><p>All amino acids showed linear responses within 1 to 1.5 orders of magnitude with correlation coefficients (r<sup>2</sup>) higher than &gt; 0.9921 (<xref ref-type="table" rid="table3">Table 3</xref>). Glu, Met, Trp, Pro, Phe and Leu responses were linear from the sub-ppb to 10 - 20 ppb whereas Ala, Lys and Tyr showed a narrower range of linearity of 2 to 20 ppb (<xref ref-type="table" rid="table3">Table 3</xref>). The response for Gly was also linear although in the much higher concentration range of 19.5 - 975 ppb which can be accounted for the little retention of the molecule which in turn may be due to the heavy charge and low molecular weight of Gly. LOD was down to the sub-ppb for most of the amino acids, Leu could even be detected at a concentration as low as 25 ppt. Ala and Lys could not be evidenced below the ppb and Gly was detected only from 20 ppb (<xref ref-type="table" rid="table3">Table 3</xref>). Nevertheless, all these LOD are 1 to 4 orders of magnitude lower than the one reported to date with both similar and different analytical techniques measuring underivatized amino acids e.g. [<xref ref-type="bibr" rid="scirp.54593-ref26">26</xref>] [<xref ref-type="bibr" rid="scirp.54593-ref28">28</xref>] [<xref ref-type="bibr" rid="scirp.54593-ref29">29</xref>] [<xref ref-type="bibr" rid="scirp.54593-ref32">32</xref>] [<xref ref-type="bibr" rid="scirp.54593-ref34">34</xref>] [<xref ref-type="bibr" rid="scirp.54593-ref35">35</xref>] [<xref ref-type="bibr" rid="scirp.54593-ref39">39</xref>] . As a conclusion the method meets the expectations and the requirements in terms of time efficiency, linearity and low LOD.</p></sec><sec id="s3_3"><title>3.3. Reproducibility and Stability</title><p>Reproducibility was found excellent and checked by doing three consecutive injections of the 1000 ppb solu- tion. This resulted in variation of less than 2% in Rt. Over a day of analyses, we observed a slight drift in the re-</p><fig id="fig1"  position="float"><label><xref ref-type="fig" rid="fig1">Figure 1</xref></label><caption><title> QTOF full SCAN of the 10 amino acids investigated in this study. The retention time Rt is indicated next to the amino acid peak. For clarity the 1.5 - 3.0 min time zone has been cut off. 100% on the Y axis is 100% of the highest peak on the time and mass window chosen on the QTOF and does not represent a concentration</title></caption><graphic mimetype="image"   position="float"  xlink:type="simple"  xlink:href="http://html.scirp.org/file/7-2201127x6.png"/></fig><table-wrap id="table3" ><label><xref ref-type="table" rid="table3">Table 3</xref></label><caption><title> Linear regression equation, square correlation coefficients, linear ranges and LOD for each amino acids investigated in this study. Linear ranges and LOD refer to the concentration in the standard solution normalised to a 10 μL injection</title></caption><table><tbody><thead><tr><th align="center" valign="middle" ></th><th align="center" valign="middle" >Equation</th><th align="center" valign="middle" >r<sup>2</sup></th><th align="center" valign="middle" >Linear range (ppb)</th><th align="center" valign="middle" >LOD (ppb)</th><th align="center" valign="middle" >LOD (nM)</th></tr></thead><tr><td align="center" valign="middle" >GLU</td><td align="center" valign="middle" >y = 0.0004x + 0.3042</td><td align="center" valign="middle" >0.9991</td><td align="center" valign="middle" >0.8 - 16</td><td align="center" valign="middle" >0.8</td><td align="center" valign="middle" >5.4</td></tr><tr><td align="center" valign="middle" >ALA</td><td align="center" valign="middle" >y = 0.0001x − 0.0827</td><td align="center" valign="middle" >0.9973</td><td align="center" valign="middle" >1.9 - 19</td><td align="center" valign="middle" >1.5</td><td align="center" valign="middle" >16.8</td></tr><tr><td align="center" valign="middle" >MET</td><td align="center" valign="middle" >y = 0.0003x + 0.3377</td><td align="center" valign="middle" >0.9928</td><td align="center" valign="middle" >0.8 - 20</td><td align="center" valign="middle" >0.53</td><td align="center" valign="middle" >3.6</td></tr><tr><td align="center" valign="middle" >TRP</td><td align="center" valign="middle" >y = 0.0004x + 1.1147</td><td align="center" valign="middle" >0.9967</td><td align="center" valign="middle" >0.44 - 17.6</td><td align="center" valign="middle" >0.44</td><td align="center" valign="middle" >2.2</td></tr><tr><td align="center" valign="middle" >PRO</td><td align="center" valign="middle" >y = 0.0007x + 0.1392</td><td align="center" valign="middle" >0.9988</td><td align="center" valign="middle" >0.84 - 21</td><td align="center" valign="middle" >0.84</td><td align="center" valign="middle" >7.3</td></tr><tr><td align="center" valign="middle" >GLY</td><td align="center" valign="middle" >y = 3.00E−06x + 0.0890</td><td align="center" valign="middle" >0.9982</td><td align="center" valign="middle" >19.5 - 975</td><td align="center" valign="middle" >19.5</td><td align="center" valign="middle" >260</td></tr><tr><td align="center" valign="middle" >LYS</td><td align="center" valign="middle" >y = 6.00E−05x + 0.3276</td><td align="center" valign="middle" >0.9996</td><td align="center" valign="middle" >2.1 - 21</td><td align="center" valign="middle" >2.1</td><td align="center" valign="middle" >14.3</td></tr><tr><td align="center" valign="middle" >TYR</td><td align="center" valign="middle" >y = 0.0003x + 0.4718</td><td align="center" valign="middle" >0.9966</td><td align="center" valign="middle" >1.95 - 15.6</td><td align="center" valign="middle" >0.39</td><td align="center" valign="middle" >2.2</td></tr><tr><td align="center" valign="middle" >PHE</td><td align="center" valign="middle" >y = 0.0013x + 3.6841</td><td align="center" valign="middle" >0.9957</td><td align="center" valign="middle" >0.42 - 16.8</td><td align="center" valign="middle" >0.14</td><td align="center" valign="middle" >0.8</td></tr><tr><td align="center" valign="middle" >LEU</td><td align="center" valign="middle" >y = 0.0017x + 5.1268</td><td align="center" valign="middle" >0.9948</td><td align="center" valign="middle" >0.38 - 15.2</td><td align="center" valign="middle" >25 ppt</td><td align="center" valign="middle" >0.2</td></tr></tbody></table></table-wrap><p>tention of the compounds that appeared less retained, however variations in Rt were still good (&lt;13%). In addition, Rt were highly reproducible from day to day and even month to month. Indeed, twice two injection of the 1000 ppb standard were done with one month interval and the obtained variation coefficients were less than 2%.</p></sec><sec id="s3_4"><title>3.4. Application to Hydrothermal Fluids Samples―DFAA Measurements</title><p>Four high temperature (350˚C - 360˚C), ultramafic-hosted hydrothermal systems located on the Mid-Atlantic Ridge were sampled: Rainbow (36˚13N, 2300 m), Ashadze 1 (12˚58N, 4100 m) and Logatchev 1 and 2 (14˚45N, 2700 - 3000 m). Details on geological settings and fluids inorganic geochemistry can be read in Charlou et al. [[<xref ref-type="bibr" rid="scirp.54593-ref10">10</xref>] and references therein]. All these sites are hosted on serpentinised peridotites with intrusive gabbroids and massive sulphides deposits are present extensively. Their fluids show the characteristic signature of hot fluids interacting with ultramafic rocks, i.e. high concentration in H<sub>2</sub> and CH<sub>4</sub>, low silica contents, enriched in Li compared to basalt-hosted systems and depleted in B compare to surrounding seawater. Of particular interest are the highly reducing conditions observed due to the high amounts of H<sub>2</sub> (Rainbow, 13 - 16 mM; Ashadze 18 - 19 mM; Logatchev 1.9 - 12.5 mM; Logatchev 2, 11 mM) [<xref ref-type="bibr" rid="scirp.54593-ref10">10</xref>] . However, each field exhibit a unique geochemistry and therefore every new discovered field or data on existing vents are crucial to better understand the overall hydrothermal biogeochemical processes.</p><p>The main characteristics of the hydrothermal fluids samples and the deep seawater reference sample that were analysed are given in <xref ref-type="table" rid="table2">Table 2</xref>. Deep seawater contained mainly Ala at a concentration of 3.86 nM (A on <xref ref-type="fig" rid="fig2">Figure 2</xref>) and Leu was detected. Ala was also reported to be a major component of seawater [<xref ref-type="bibr" rid="scirp.54593-ref54">54</xref>] [<xref ref-type="bibr" rid="scirp.54593-ref55">55</xref>] . Gly could not be detected in any of the samples which we assume is due to its higher LOD. Although Glu, Lys and Tyr had a much lower LOD, they were not detected either in hydrothermal fluids, which means that they still might be present but at concentration below 5.4, 14.3 and 2.2 nM respectively (<xref ref-type="table" rid="table2">Table 2</xref> and <xref ref-type="table" rid="table3">Table 3</xref>). Pro possibly occurred in only one sample of the Rainbow field, however the peak area was very small, so this result will need to be confirmed by further analyses. All fluids from the Ashadze 1 vent contained Trp (C on <xref ref-type="fig" rid="fig2">Figure 2</xref>) as well as the purest hot fluid sample from the Rainbow field (97% pure fluid) but was below LOQ. Phe could not be quantified in the samples as it was out of the linear domain, however it was definitely detected in all hydrothermal fluids (B on <xref ref-type="fig" rid="fig2">Figure 2</xref>) but one, whereas it was not detected in the deep seawater sample. Finally, Leu was with no doubt detected in all samples except for the purest hot fluid of the Rainbow field and measured concentrations were in the range 114 to 413 pM (<xref ref-type="table" rid="table2">Table 2</xref>). Trp, Phe and Leu that were quite clearly evidenced in the samples showed linearity down to lower concentration than the other amino acids. Especially Leu, which had the highest response and lowest LOD, could be accurately quantified. To be noted, Isoleucine (Ile), an isomer of Leu, was not investigated in this series of experiments, nevertheless the injection at a later stage of a standard solution of Ile and a standard solution of Leu revealed that these compounds elute in two well resolved peaks separated by 10 s. Therefore could Leu be distinguish from Ile and quantified separately.</p><p>We suspect amino acids to be present in hydrothermal fluids, however that a large portion occurs as metal complexes and cannot be detected using current approach. Earlier studies have shown indeed that amino acids can form complexes with a wide variety of metals and that the side chains −OH, −COOH, −CONH<sub>2</sub> are often involved in the coordination [<xref ref-type="bibr" rid="scirp.54593-ref56">56</xref>] [<xref ref-type="bibr" rid="scirp.54593-ref57">57</xref>] . Notably, this phenomenon is not to be considered marginal as, for example, Cu<sup>II</sup> transport in blood partly occur via amino acid complexation [[<xref ref-type="bibr" rid="scirp.54593-ref58">58</xref>] and references therein]. Furthermore, the adsorption of amino acids on clay minerals is believed to occur through metal ions [<xref ref-type="bibr" rid="scirp.54593-ref59">59</xref>] . Besides, there is no doubt that clays [<xref ref-type="bibr" rid="scirp.54593-ref60">60</xref>] , sand [<xref ref-type="bibr" rid="scirp.54593-ref61">61</xref>] , sediments, [<xref ref-type="bibr" rid="scirp.54593-ref62">62</xref>] and many minerals [<xref ref-type="bibr" rid="scirp.54593-ref63">63</xref>] -[<xref ref-type="bibr" rid="scirp.54593-ref65">65</xref>] can retain and concentrate amino acids by adsorption. Mineral surface may also facilitate condensation and oligomerization reactions [<xref ref-type="bibr" rid="scirp.54593-ref66">66</xref>] although recent experiments under hydrothermal conditions led to the opposite conclusion [<xref ref-type="bibr" rid="scirp.54593-ref20">20</xref>] . Research regarding the adsorption and reactions of amino acids on mineral surfaces has largely been reviewed elsewhere [<xref ref-type="bibr" rid="scirp.54593-ref63">63</xref>] [<xref ref-type="bibr" rid="scirp.54593-ref66">66</xref>] [<xref ref-type="bibr" rid="scirp.54593-ref67">67</xref>] . As a result the amino acids possibly formed in hydrothermal systems may occur either adsorbed on minerals, or as oligomers or free; the proportion of each being unknown. The oligomer portion can be recovered and analysed by hydrolysis of the samples. Consistently Fuchida and coworkers found higher amounts of total hydrolizable amino acids (THAA) than DFAA in the Mariana Through [<xref ref-type="bibr" rid="scirp.54593-ref12">12</xref>] . Thus the very low concentration of DFAA detected in this study may represent only a small portion of the in-situ concentration. We suggest that a desalting step prior to preconcentration might help recovering higher amount of amino acids.</p><p>The amino acid concentration of our deep seawater reference is in the same order of magnitude as total DFAA background measured by other techniques in deep seawater from various places (Personal communication, R.</p><fig-group id="fig2"><label><xref ref-type="fig" rid="fig2">Figure 2</xref></label><caption><title> Representative parts of the QTOF full SCAN of three samples were selected and enlarged in order to show examples of amino acids peaks detected in the hydrothermal fluid samples. Ala in MAD-D2-Ti2D (A) could be quantified, whereas Phe and Trp in SE-D2-Ti2 (B and C respectively) could be detected but not quantified. 100% on the Y axis is 100% of the highest peak on the time and mass window chosen on the QTOF and does not represent a concentration.</title></caption><fig id ="fig2_1"><label>(B)</label><graphic mimetype="image"   position="float"  xlink:type="simple"  xlink:href="http://html.scirp.org/file/7-2201127x7.png"/></fig><fig id ="fig2_2"><label> (C)</label><graphic mimetype="image"   position="float"  xlink:type="simple"  xlink:href="http://html.scirp.org/file/7-2201127x8.png"/></fig><fig id ="fig2_3"><label></label><graphic mimetype="image"   position="float"  xlink:type="simple"  xlink:href="http://html.scirp.org/file/7-2201127x9.png"/></fig></fig-group><p>Kerouel). It is also reasonably consistent with the concentrations (&lt; 110 nM) reported by Kaiser [<xref ref-type="bibr" rid="scirp.54593-ref68">68</xref>] in the 2300 - 4000 m depth of the water column at a station in the Atlantic near Bermudas. Svensson et al. [<xref ref-type="bibr" rid="scirp.54593-ref17">17</xref>] have reported amino acids concentrations in a moderate temperature shallow hydrothermal system surrounded by sediments: Total DFAA values ranged from 330 to 78,380 nM for hydrothermal samples and 430 nM for surrounding seawater. TDHFAA values published by Horiuchi et al. [<xref ref-type="bibr" rid="scirp.54593-ref14">14</xref>] for a deeper (1380 m) and hot (300˚C) hydrothermal system were in the lower range of 95.9 - 1061.6 nM and 324 nM for surrounding seawater. Amino acids contents were in the 3.82 - 15.24 &#181;M (THAA) and &lt; 0.22 &#181;M (DFAA) in the hottest samples (T = 160˚C - 270˚C) of a vent field located at 2800 m depth in the Mariana Through [<xref ref-type="bibr" rid="scirp.54593-ref12">12</xref>] . Only two studies report on the amino acid presence in ultramafic-hosted vents. Lost City (~800 m depth) that is a one of its kind vent field having low T (&lt; 100˚C) and very high pH (11) fluids has THAA concentrations ranging from 736 - 1565 nM in the purest samples. Klevenz et al. [<xref ref-type="bibr" rid="scirp.54593-ref15">15</xref>] found very low total DFAA (38 nM) in their samples (fluid % &gt; 90) from the Logatchev ultramafic-hosted vent field whereas the other basalt-hosted fields of the Mid-Atlantic ridge had concentrations varying from 52 to 377 nM in the samples containing more than 70% of fluid. All fields in their study lied by about 3000 m depth with a fluids temperature of ~350˚C. We found here even lower amounts as only picomolar concentrations were measured. All fluids reached 350˚C and were collected at depth between 2300 and 4000 m. Our results complete the current dataset on amino acids in hydrothermal fluids but still no particular pattern relating amino acid concentration or occurrence with depth, temperature, host rocks or pH seems to emerge as mentioned by some of the above cited authors. This means that more work has to be done on natural samples to unravel the complex processes amino acids are involved in and to better understand their roles in hydrothermal environments and plumes. The technique we described here should help analysing more samples, faster, with low contamination source and down to sub-nM levels.</p></sec></sec><sec id="s4"><title>4. Conclusion</title><p>We report a method for the analyses of underivatized amino acids in the complex matrix that are hydrothermal fluids meaning low pH, high salts and metal contents. The use UPLC-ESI-QTOF-MS ensures fast separation with high resolution. An ion-pairing agent (HFBA) was used to enhance the retention of amino acids on the apolar classic C<sub>18</sub> column. Ten chosen proteinogenic amino acids were successfully separated in 4.5 min with symmetrical and thin peak shapes. The linearity was excellent for all amino acids and LOD were in the 0.2 - 16.8 nM range depending on amino acids at the exception of Gly (260 nM). The method was found stable over days and months and exhibited a good reproducibility in Rt and peak areas. Overall the analyses of natural hydrothermal fluid samples were successfully carried out using our approach. The results are in agreement with published data for deep seawater and hydrothermal fluids. To be noted picomolar concentrations of Leu could be measured in 2 samples. Such low concentrations had never been reported in hydrothermal fluids because the LOD of other studies using other techniques were usually ≥ 1 nM.</p></sec><sec id="s5"><title>Acknowledgements</title><p>We thank Yves Fouquet as well as Fran&#231;oise Gaill and Jer&#244;me Dyment chief scientists of the SERPENTINE (2007) and MOMARDREAM-naut1 (2007) cruises, respectively, who kindly allocated us a place to join their cruise and allowed us to collect and to use hydrothermal fluid samples for this study. We are also very thankful to IFREMER for funding and organisation of the cruises. Additionally, we particularly address our regards to the ROV Victor 6000 team, the Nautile team, the R/V (Research Vessel) Pourquoi pas? crew and the R/V l’Atalante crew for their time, efficiency and precious help. Also, we very much appreciated all discussions with Dr. R. Kerouel; they were very helpful and thank him for his time and for providing us with some data. 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