<?xml version="1.0" encoding="UTF-8"?><!DOCTYPE article  PUBLIC "-//NLM//DTD Journal Publishing DTD v3.0 20080202//EN" "http://dtd.nlm.nih.gov/publishing/3.0/journalpublishing3.dtd"><article xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink" dtd-version="3.0" xml:lang="en" article-type="research article"><front><journal-meta><journal-id journal-id-type="publisher-id">OJApo</journal-id><journal-title-group><journal-title>Open Journal of Apoptosis</journal-title></journal-title-group><issn pub-type="epub">2168-3832</issn><publisher><publisher-name>Scientific Research Publishing</publisher-name></publisher></journal-meta><article-meta><article-id pub-id-type="doi">10.4236/ojapo.2014.32003</article-id><article-id pub-id-type="publisher-id">OJApo-45074</article-id><article-categories><subj-group subj-group-type="heading"><subject>Articles</subject></subj-group><subj-group subj-group-type="Discipline-v2"><subject>Biomedical&amp;Life Sciences</subject></subj-group></article-categories><title-group><article-title>
 
 
  Staurosporine-Induced Cell Death in &lt;em&gt;Trypanosoma brucei&lt;/em&gt; and the Role of Endonuclease G during Apoptosis
 
</article-title></title-group><contrib-group><contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>orsten</surname><given-names>Barth</given-names></name><xref ref-type="aff" rid="aff1"><sup>1</sup></xref></contrib><contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Gustavo</surname><given-names>Bruges</given-names></name><xref ref-type="aff" rid="aff2"><sup>2</sup></xref></contrib><contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Andreas</surname><given-names>Meiwes</given-names></name><xref ref-type="aff" rid="aff1"><sup>1</sup></xref></contrib><contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Stefan</surname><given-names>Mogk</given-names></name><xref ref-type="aff" rid="aff1"><sup>1</sup></xref></contrib><contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Celestin</surname><given-names>N. Mudogo</given-names></name><xref ref-type="aff" rid="aff1"><sup>1</sup></xref></contrib><contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Michael</surname><given-names>Duszenko</given-names></name><xref ref-type="aff" rid="aff3"><sup>3</sup></xref><xref ref-type="corresp" rid="cor1"><sup>*</sup></xref></contrib></contrib-group><aff id="aff3"><addr-line>Faculty of Medicine, Tongji University, Shanghai, China</addr-line></aff><aff id="aff2"><addr-line>Insituto Venezolano de Investigaciones Científicas, Caracas, Venezuela</addr-line></aff><aff id="aff1"><addr-line>Interfakult?res Institut für Biochemie, University of Tübingen, Tübingen, Germany </addr-line></aff><author-notes><corresp id="cor1">* E-mail:<email>michael.duszenko@uni-tuebingen.de(MD)</email>;</corresp></author-notes><pub-date pub-type="epub"><day>21</day><month>04</month><year>2014</year></pub-date><volume>03</volume><issue>02</issue><fpage>16</fpage><lpage>31</lpage><history><date date-type="received"><day>10</day>	<month>December</month>	<year>2013</year></date><date date-type="rev-recd"><day>31</day>	<month>January</month>	<year>2014</year>	</date><date date-type="accepted"><day>10</day>	<month>February</month>	<year>2014</year></date></history><permissions><copyright-statement>&#169; Copyright  2014 by authors and Scientific Research Publishing Inc. </copyright-statement><copyright-year>2014</copyright-year><license><license-p>This work is licensed under the Creative Commons Attribution International License (CC BY). http://creativecommons.org/licenses/by/4.0/</license-p></license></permissions><abstract><p>
 
 
  Apoptosis in single-cell organisms like 
  <em>Trypanosoma </em>or
  <em> Leishmania </em>was characterized in several studies in the last few years [1]-[4]. Cell death in these caspase lacking protozoa is still poorly understood and a conclusive apoptotic pathway has not been identified so far. In the work presented here, we studied the effects of prostaglandin D
  <sub>2</sub> and staurosporine induced cell death in blood-forms of 
  <em>Trypanosoma brucei </em>in a time dependent manner and focused on the role of a nuclease similar to endonuclease G of higher eukaryotes. We found that these parasites undergo apoptotic cell death as demonstrated by the appearance of several canonical hallmarks of apoptosis in higher eukaryotes, but that different stimuli induce remarkable differences in the way these cells die. We compared the effects of prostaglandin D
  <sub>2</sub> and staurosporine in trypanosomes with and without endonuclease G overexpression by flow cytometric and electron microscopic methods with the result that endonuclease G overexpression led to a significant modification of intracellular organelles and accelerated apoptotic cell death in prostaglandin D
  <sub>2</sub> or staurosporine treated cells. Our results demonstrate that different stimuli induce apoptosis even in these ancient organisms in different caspase-independent ways. Whereas central processes of apoptosis like ROS formation, loss of mitochondrial membrane potential, endonuclease G release, phosphatidylserine exposure and DNA fragmentation appeared in the same chronology during treatment with either one of both drugs, other effects like cell cycle arrest or change of cell shape occurred only in the case of prostaglandin D
  <sub>2</sub> or staurosporine treatment. We conclude from these results that trypanosomes react to stimuli of apoptosis with the concerted action of cellular responses but cannot control the final outcome if additional stress, as in the case of staurosporine, is superimposed.
 
</p></abstract><kwd-group><kwd>&lt;em&gt;Trypanosoma brucei&lt;/em&gt;</kwd><kwd> Endonuclease</kwd><kwd> EndoG</kwd><kwd> Staurosporine</kwd><kwd> Programmed Cell Death</kwd><kwd> Apoptosis</kwd></kwd-group></article-meta></front><body><sec id="s1"><title>Abstract</title><p>Apoptosis in single-cell organisms like Trypanosoma or Leishmania was characterized in several studies in the last few years [<xref ref-type="bibr" rid="scirp.45074-ref1">1</xref>] -[<xref ref-type="bibr" rid="scirp.45074-ref4">4</xref>] . Cell death in these caspase lacking protozoa is still poorly understood and a conclusive apoptotic pathway has not been identified so far. In the work presented here, we studied the effects of prostaglandin D<sub>2</sub> and staurosporine induced cell death in bloodforms of Trypanosoma brucei in a time dependent manner and focused on the role of a nuclease similar to endonuclease G of higher eukaryotes. We found that these parasites undergo apoptotic cell death as demonstrated by the appearance of several canonical hallmarks of apoptosis in higher eukaryotes, but that different stimuli induce remarkable differences in the way these cells die. We compared the effects of prostaglandin D<sub>2</sub> and staurosporine in trypanosomes with and without endonuclease G overexpression by flow cytometric and electron microscopic methods with the result that endonuclease G overexpression led to a significant modification of intracellular organelles and accelerated apoptotic cell death in prostaglandin D<sub>2</sub> or staurosporine treated cells. Our results demonstrate that different stimuli induce apoptosis even in these ancient organisms in different caspase-independent ways. Whereas central processes of apoptosis like ROS formation, loss of mitochondrial membrane potential, endonuclease G release, phosphatidylserine exposure and DNA fragmentation appeared in the same chronology during treatment with either one of both drugs, other effects like cell cycle arrest or change of cell shape occurred only in the case of prostaglandin D<sub>2</sub> or staurosporine treatment. We conclude from these results that trypanosomes react to stimuli of apoptosis with the concerted action of cellular responses but cannot control the final outcome if additional stress, as in the case of staurosporine, is superimposed.</p><p>Keywords:Trypanosoma brucei, Endonuclease, EndoG, Staurosporine, Programmed Cell Death, Apoptosis</p><p><img src="htmlimages\2-2480013x\c8d1cb2d-55a2-437d-80cb-00767765c35a.png" /></p></sec><sec id="s2"><title>1. Introduction</title><p>Trypanosomatids form a group of mono-flagellated single cell parasites of insects. Some of these, like Trypanosoma brucei, Trypanosoma cruzi and various species of leishmania are responsible for human infecting diseases which concern some 445 million people all over the world [<xref ref-type="bibr" rid="scirp.45074-ref5">5</xref>] : Leishmaniasis affects some 350 million people primarily in the tropics; in Africa some 70 million people are at the risk of contracting human African trypanosomiasis (HAT or sleeping sickness) and in Latin America about 25 million people are at the risk of getting American trypanosomiasis also known as Chagas disease.</p><p>T. brucei is a heteroxenous parasite with a complex life cycle. It uses two hosts, the tsetse fly (Glossina spp.) and different vertebrate hosts including man. The parasite lives in the mid-gut of the fly before it migrates to the salivary gland. Here it differentiates first to the epimastigotic form and eventually to the metacyclic form, which is infectious for the vertebrate host. Following the bite of a tsetse fly, the parasite appears in the hemolymphatic system, where it transforms to the slender blood-form. In blood, this form divides by binary fission and, depending on cell density, may differentiate to the non-dividing stumpy blood-form, which was used throughout this study. Stumpy parasites will die if not taken up by another tsetse fly during a blood meal. As described previously, trypanosomes produce different prostaglandins (PGs) including PGF<sub>2α</sub> and PGD<sub>2</sub>. PGF<sub>2α</sub> is mainly produced by the slender form and may act as a growth factor, whereas PGD<sub>2</sub> is mainly produced by the stumpy form and acts as a cell density regulator inducing apoptosis [<xref ref-type="bibr" rid="scirp.45074-ref6">6</xref>] .</p><p>In higher eukaryotes, apoptosis is a fundamental phenomenon in the homoeostasis of tissues and especially involved in embryonic development, morphogenesis, selectivity of immune cells, tissue atrophy and tumour regression. While it is thus a significant contributor to the functional development and maintenance of multicellular organisms, the advantages of apoptosis for unicellular organisms are much less evident. Nevertheless, apoptosis or apoptosis-like phenotypes have been described in many different single-cell eukaryotes, such as yeast [<xref ref-type="bibr" rid="scirp.45074-ref7">7</xref>] [<xref ref-type="bibr" rid="scirp.45074-ref8">8</xref>] , Tetrahymena [<xref ref-type="bibr" rid="scirp.45074-ref9">9</xref>] , Dictyostelium [<xref ref-type="bibr" rid="scirp.45074-ref10">10</xref>] , and different kinetoplastids like trypanosomes [<xref ref-type="bibr" rid="scirp.45074-ref3">3</xref>] and leishmania [<xref ref-type="bibr" rid="scirp.45074-ref1">1</xref>] [<xref ref-type="bibr" rid="scirp.45074-ref4">4</xref>] . It has also been suggested that apoptosis may even occur in bacteria [<xref ref-type="bibr" rid="scirp.45074-ref11">11</xref>] [<xref ref-type="bibr" rid="scirp.45074-ref12">12</xref>] . In T. brucei, apoptosis contributes to cell density regulation [<xref ref-type="bibr" rid="scirp.45074-ref3">3</xref>] and acts as a mechanism to maintain genetic stability and differentiation [<xref ref-type="bibr" rid="scirp.45074-ref13">13</xref>] .</p><p>Extensive analyses of protozoa genomes revealed that genes encoding typical proteins for apoptosis regulation in metazoa like caspases, members of the Bcl-2 family or a caspase-activated DNase (CAD) are missing. Interestingly, endonuclease G (EndoG), another nuclease active during apoptosis in higher eukaryotes [<xref ref-type="bibr" rid="scirp.45074-ref14">14</xref>] [<xref ref-type="bibr" rid="scirp.45074-ref15">15</xref>] , is, however, also expressed in kinetoplastids [<xref ref-type="bibr" rid="scirp.45074-ref16">16</xref>] [<xref ref-type="bibr" rid="scirp.45074-ref17">17</xref>] . This nuclease is encoded in nuclear DNA and is translocated into the mitochondrion, where it may be involved in replication and repair functions [<xref ref-type="bibr" rid="scirp.45074-ref18">18</xref>] . EndoG belongs to the ββα-metal superfamily of DNA/RNA non-specific nucleases, requires divalent cations like Mg<sup>2+</sup> for activity, and is inhibited by moderate salt concentrations (100 - 150 mM NaCl) [<xref ref-type="bibr" rid="scirp.45074-ref19">19</xref>] [<xref ref-type="bibr" rid="scirp.45074-ref20">20</xref>] . After induction of apoptosis by different stimuli (including staurosporine), the mitochondrial membrane potential is lost and EndoG is translocated via the cytosol into the nucleus, where it participates in chromatin DNA degradation [<xref ref-type="bibr" rid="scirp.45074-ref14">14</xref>] [<xref ref-type="bibr" rid="scirp.45074-ref21">21</xref>] .</p><p>The trypanosomal EndoG molecule is significantly larger than the respective endonuclease in higher eukaryotes. While human or bovine EndoG consists of 297 or 299 amino acids with a molecular weight of 32.6 kDa or 32.3 kDa respectively, trypanosomal EndoG contains 506 amino acids leading to a predicted molecular weight of 55.8 kDa.</p><p>Nevertheless, comparison of trypanosomal EndoG with mammalian EndoG molecules showed several conserved amino acid residues and revealed some 30% identity with human or bovine EndoG on the protein level.</p><p>In the present study, we used prostaglandin D<sub>2</sub> (PGD<sub>2</sub>) and staurosporine (STS) to investigate appearance of apoptotic hallmarks like cell cycle arrest, intracellular ROS production, loss of mitochondrial membrane potential, DNA fragmentation and phosphatidylserine exposure by flow cytometric analysis.</p><p>PGD<sub>2</sub> is a prostanoid derived from arachidonic acid via the cyclooxygenase pathway. In T. brucei, PGD<sub>2</sub> is produced and secreted by the stumpy bloodform and induces an apoptosis-like cell death which includes intracellular ROS formation, phosphatidylserine exposure, loss of mitochondrial membrane potential and DNA degradation [<xref ref-type="bibr" rid="scirp.45074-ref3">3</xref>] . The stumpy bloodform was also shown to be more sensitive to PGD<sub>2</sub> than the slender bloodform, suggesting that the physiological function of PGD<sub>2</sub> is related to the parasite’s cell density regulation and acts therefore in favour of a balanced parasite-host interrelationship [<xref ref-type="bibr" rid="scirp.45074-ref2">2</xref>] [<xref ref-type="bibr" rid="scirp.45074-ref22">22</xref>] .</p><p>Staurosporine is a microbial alkaloid and a strong broad spectrum protein kinase inhibitor which has been shown to induce apoptosis in uniand multicellular organisms [<xref ref-type="bibr" rid="scirp.45074-ref23">23</xref>] -[<xref ref-type="bibr" rid="scirp.45074-ref27">27</xref>] . The mechanism of STS-induced apoptosis is still unknown but it involves alteration of the phosphorylation state, alterations related to cell cycle control and DNA degradation [<xref ref-type="bibr" rid="scirp.45074-ref24">24</xref>] .</p><p>In L. major STS-induced apoptosis showed several cytoplasmic and nuclear effects, including cell shrinkage, phosphatidylserine exposure, maintenance of plasma membrane integrity, loss of mitochondrial membrane potential, cytochrome c release, nuclear chromatin condensation and DNA fragmentation [<xref ref-type="bibr" rid="scirp.45074-ref23">23</xref>] . In former studies, the anti-parasitic activity of STS against T. brucei was observed, but has not been evaluated yet [<xref ref-type="bibr" rid="scirp.45074-ref28">28</xref>] [<xref ref-type="bibr" rid="scirp.45074-ref29">29</xref>] . In addition, STS has been used to assess its effect on cellular signalling pathways associated with phospholipids in T. cruzi [<xref ref-type="bibr" rid="scirp.45074-ref30">30</xref>] .</p><p>Elucidation of the molecular mechanisms leading to apoptosis in trypanosomes will help to understand the in vivo role and to identify new target molecules for chemotherapeutic drug development, because diverse substances like pentostam (a pentavalent antimony compound), amphotericin B, flavonoids, H<sub>2</sub>O<sub>2</sub>, nitric oxide, quercetin, staurosporine, prostaglandin D<sub>2</sub> and metabolites of the J<sub>2</sub> series seem to induce apoptosis in trypanosomes [<xref ref-type="bibr" rid="scirp.45074-ref1">1</xref>] [<xref ref-type="bibr" rid="scirp.45074-ref3">3</xref>] [<xref ref-type="bibr" rid="scirp.45074-ref13">13</xref>] [<xref ref-type="bibr" rid="scirp.45074-ref31">31</xref>] [<xref ref-type="bibr" rid="scirp.45074-ref32">32</xref>] . To obtain a better understanding of how EndoG acts, we also cloned and expressed rTbEndoG in E. coli and in T. brucei, expressed it in T. brucei as a fusion protein containing eGFP, and overexpressed or knocked down the parasite’s enzyme in trypanosomes.</p></sec><sec id="s3"><title>2. Material and Methods</title><sec id="s3_1"><title>2.1. Parasites</title><p>For RNAi and overexpression experiments, a clonal single marker blood-form line (SMB BF) derived from BF 221 (MiTat1.2) [<xref ref-type="bibr" rid="scirp.45074-ref33">33</xref>] that constitutively expresses T7 RNA-polymerase (Plasmid pHD328) and Tn10 Tet repressor (Plasmid pLEW114hyg5’) was used.</p></sec><sec id="s3_2"><title>2.2. Cloning, Protein Expression and Purification of rTbEndoG</title><p>T. brucei EndoG (Tb427.9.4040) was amplified by PCR using genomic DNA from T. brucei MiTat1.2 as template and the following primers for either recombinant expression of rTbEndoG in E. coli, TbEndoG overexpression in T. brucei, or TbEndoG-eGFP expression in T. brucei:</p><p>1) Primer for rTbEndoG in pProEx HTa in E. coli fw-EcoRI-TbEndoG: 5’-GAATTCAGTGGACGGAAGGACCTCATAG-3’</p><p>rev-NotI-TbEndoG: 5’-GCGGCCGCCCCTGGAAAGTTACAAATAAGG-3’</p><p>2) Primer for TbEndoG in pLew100v5-Hyg in T. brucei fw-HindIII-TbEndoG: 5’-ACGGAAGCTTATGCATCGCATCACCGTAC-3’</p><p>rev-BamHI-TbEndoG: 5’-ACTTGGATCCTTAACCGGTGTCGTTGGTC-3’</p><p>3) Primer for TbEndoG-eGFP in pCO57 in T. brucei fw-HindIII-TbEndoG: 5’-AAGCTTATGCATCGCATCACCGTA-3’</p><p>rev-PvuII-TbEndoG: 5’-CAGCTGACCGGTGTCGTTGGTCG-3’</p><p>The PCR reaction was run by using AccuPrime<sup>&#174;</sup> Taq DNA polymerase high fidelity (Invitrogen) according to the manufacturer’s protocol.</p><p>TA Cloning Kit (Invitrogen) was used for subcloning the PCR products into pCR2.1 plasmids. Plasmids were transformed into TOP10 competent E. coli cells (Invitrogen) and grown in Luria-Bertani Broth. Plasmid pCR2.1-EndoG was purified by QIAprep spin miniprep kit (Qiagen) and then digested with the necessary restriction enzymes. DNA fragments extracted from agarose gels were cloned into expression plasmids.</p><p>pProEx HTa (Invitrogen) was used as expression vector in E. coli. The plasmid was transformed into BL21(DE3) competent E. coli cells (Invitrogen) and expressed by IPTG induction using a concentration of 0.5 mM for 5 h at 37˚C. The protein was expressed and appeared within inclusion bodies. Cells were washed with inclusion bodies wash buffer (20 mM Tris-HCl, pH 7.5, containing 10 mM EDTA and 1% Triton X-100). Re-suspended cells were incubated for 15 min at 30˚C in the presence of 100 &#181;g/ml lysozyme. Cells were sonicated on ice using a sonifier with an appropriate tip size (3 &#215; 1 min at 50% power). Immediately following cell lysis, a protease inhibitors cocktail (Thermo Scientific) was added. Inclusion bodies were collected by a 10 min centrifugation step at 10.000 g and solubilized in solubilisation buffer (20 mM Tris-HCl, pH 11, containing 1% N-lauroylsarcosine) for 15 min at RT and 4˚C overnight. Solubilized inclusion bodies were clarified by centrifuging at 10.000 g for 10 min at 4˚C. Inclusion bodies were then dialysed against dialysation buffer (20 mM Tris-HCl, pH 7.5, containing 300 mM NaCl and 0.1% Triton X-100) and purified by affinity chromatography.</p><p>For this purpose, solubilized inclusion bodies were loaded onto a Ni-NTA column (Qiagen), washed with 20 mM Tris-HCl, pH 7.5, containing 300 mM NaCl, 10 mM imidazole and 0.1% Triton X-100, and eluted with an imidazole gradient (0 to 500 mM) in the same buffer system. Eluted peak fractions were dialysed against cleavage dialysis buffer (20 mM Tris-HCl, pH 7.2, containing 100 mM KCl, 10% glycerol, 0.1% Triton X-100 and 0.5 mM DTT) using dialysis tubes with a cut off of 14 kDa. The obtained His-tagged protein was cleaved using AcTEV Protease (Invitrogen) by incubating it for 4 h at RT and overnight at 4˚C.</p><p>The cleavage reaction mixture was diluted 1:1 with wash buffer and loaded again onto a Ni-NTA column pre-equilibrated with wash buffer. Peak fractions of the purified protein were pooled and subsequently concentrated using a 10 kDa NMWL centricon (Millipore) and dialysed overnight against dialysis buffer.</p></sec><sec id="s3_3"><title>2.3. Knock down and Overexpression of TbEndoG</title><p>For TbEndoG knock down experiments the tetracycline-inducible RNAi vector p2T7-TA blue was used. Synthesis of dsRNA was induced by adding 10 &#181;g/ml doxycycline to cell cultures. Instead of tetracycline, doxycycline was used in this work.</p><p>For overexpression of TbEndoG, the tetracycline-inducible vector pLEW100v5-Hyg was used. Following a NotI linearization, both vectors were inserted into SMB blood-form cells by electroporation before these cells were cultivated in HMI-9 medium. Selection was obtained by adding 2 &#181;g/ml G418 and 2.5 &#181;g/ml hygromycin B to the culture medium.</p><p>pCO57 was used as expression vector for TbEndoG-eGFP expression in T. brucei. The plasmid was transfected into SMB blood-form trypanosomes by electroporation and selected using 2 &#181;g/ml G418 and 2.5 &#181;g/ml phleomycin.</p></sec><sec id="s3_4"><title>2.4. Nuclease Cleavage Assay</title><p>One microgram of plasmid DNA was incubated for 30 min at 37˚C with recombinant wild-type T. brucei EndoG (either rTbEndoG with His-tag or rTbEndoG without His-tag and 200 ng purified protein) in assay buffer consisting of 20 mM HEPES, pH 7.5, containing 3 mM MgCl<sub>2</sub> and 0.1% Triton X-100. The cleavage products were resolved on a 1% agarose gel and stained with ethidium bromide.</p></sec><sec id="s3_5"><title>2.5. Growth Curves</title><p>SMB trypanosomes were grown axenically in HMI-9 medium. Stabilates of parasites from liquid nitrogen were thawed, seeded at a cell density of 2 &#215; 10<sup>5</sup> cells/ml and grown at 37˚C and 5% CO<sub>2</sub> for 20 h. Afterwards, cultures were diluted to 2 &#215; 10<sup>5</sup> cells/ml using fresh culture medium to start the experiments. PGD<sub>2</sub> was purchased from Cayman Chemical Co., reconstituted in ethanol and diluted to the respective concentrations using culture medium. Staurosporine from Streptomyces sp. was purchased from Sigma-Aldrich and dissolved in DMSO. The corresponding volume of solvent was added to the untreated control cells.</p></sec><sec id="s3_6"><title>2.6. esiRNA</title><p>For TbEndoG gene silencing we used Mission<sup>&#174;</sup> esiRNA from Sigma Aldrich. Endoribonuclease-prepared siRNAs or esiRNA are a mixture of siRNAs with an average length of 21 bp resulting from cleavage of long double-stranded RNA (dsRNA) with Escherichia coli RNase III. We added 5 &#181;l (1 &#181;g) of esiRNA derived from the target sequence 5’-CTCATGCCCACTGATACGTGCACTGTCATCCCACTTACTCCTTCTATTACAC TTTGTGG-3’ to TbEndoG-over and SMB control cells. Cell cultures were prepared as described before and cells were grown under normal growth conditions.</p></sec><sec id="s3_7"><title>2.7. qRT-PCR</title><p>SMB trypanosomes were grown axenically in HMI-9 medium. TbEndoG expression was induced by adding 10 &#181;g/ml doxycycline. After 24 h, cells were treated with 10 &#181;M PGD<sub>2</sub> and harvested after another 24 h under culture conditions. Total RNA was isolated using RNeasy Mini Kit (Qiagen) according to the manufacturer’s protocol, solved in RNase free water and stored at −20˚C. qRT-PCR experiments were set up using Power SYBR<sup>&#174;</sup> Green RNA-to-CT™ 1-Step Kit (Invitrogen) and analyzed in a LightCycler<sup>&#174;</sup> 480 Real-Time PCR System (Roche).</p></sec><sec id="s3_8"><title>2.8. Detection of Apoptotic Hallmarks by Flow Cytometry</title><p>Characterization of apoptotic hallmarks was performed by using different fluorescence marker. Cells were analyzed using a FACSCantoII flow cytometer (BD Biosciences).</p><sec id="s3_8_1"><title>2.8.1. Intracellular ROS</title><p>Intracellular reactive oxygen species (ROS) were detected with 2’,7’-dichlorodihydrofluorescein diacetate (H<sub>2</sub>DCFDA), 3’-(p-aminophenyl)fluorescein (APF) or dihydroethidium (DHE), all purchased from Sigma Aldrich (Germany). All reagents were dissolved in DMSO and stored at −20˚C until further use. Following a 24 h incubation with 10 &#181;M PGD<sub>2</sub> or 10 nM staurosporine to induce apoptosis, cells were washed with Ringer’s solution (147 mM NaCl, 4 mM KCl, 2.3 mM CaCl<sub>2</sub>, 1 M NaHCO<sub>3</sub>, pH 7.4) and incubated in the dark for 10 min at 37˚C using one of the respective ROS markers. Afterward cells were transferred on ice for performing flow cytometric analysis.</p></sec><sec id="s3_8_2"><title>2.8.2. Mitochondrial Membrane Potential (Ψ<sub>m</sub>)</title><p>Loss of mitochondrial membrane potential (ΔΨ<sub>m</sub>) was detected using tetramethylrhodamine ethyl ester (TMRE). For this purpose, TMRE was solved in DMSO and stored at −20˚C until further use. Following a 24 h incubation in the presence of PGD<sub>2</sub> or staurosporine to induce apoptosis, cells were washed with Ringer’s solution and incubated in the dark for 10 min at 37˚C with 25 nM TMRE. Afterward cells were transferred on ice to perform flow cytometric analysis.</p></sec><sec id="s3_8_3"><title>2.8.3. DNA Content</title><p>Detection of DNA within the nucleus was performed using propidium iodide (PI). For this purpose, 1 &#215; 10<sup>6</sup> cells were washed in Ringer’s solution and lysed with 6 mM digitonin. Samples were vortexed and incubated for 30 min at RT. Nuclei were stained with a propidium iodide solution (10 mg/ml) 1 h before measurements using a FACSCantoII flow cytometer.</p></sec><sec id="s3_8_4"><title>2.8.4. Phosphatidylserine Exposure</title><p>To detect phosphatidylserine exposure on the outer membrane of cells, annexin-V-fluos (Roche) was used. Cells were washed in Ringer’s solution and incubated for 15 min with annexin-V at 4˚C. Fluorescence was measured by flow cytometric analysis as described before.</p></sec></sec><sec id="s3_9"><title>2.9. Fluorescence Microscopy</title><p>To stain mitochondria, 1 &#215; 10<sup>6</sup> trypanosomes were incubated in HMI-9 medium containing 50 nM MitoTracker<sup>&#174;</sup> Red CMXRos (Invitrogen) for 20 min at 37˚C and 5% CO<sub>2</sub> prior to fixation in 3.5% paraformaldehyde. Following fixation, parasites were settled onto poly-L-lysine-coated slides, incubated with 50 mM glycine in PBS for 15 min and permeabilized with 0.2% Triton X-100 in PBS for 5 min. Nuclei were labelled using 4’,6-diamidino-2-phenylindole (DAPI). Cells were visualised using a Zeiss Cell Observer microscope.</p></sec><sec id="s3_10"><title>2.10. Transmission Electron Microscopy (TEM)</title><p>1 &#215; 10<sup>8</sup> trypanosomes were harvested and washed twice with PBS. Fixation was performed for 1 h at 4˚C using 2% glutaraldehyde dissolved in 0.2 M sodium cacodylate buffer containing 0.12 M sucrose. After washing four times (10 min each) and storage overnight in sodium cacodylate buffer, cells were post-fixed in 1.5% osmium tetroxide and stained in 0.5% uranyl acetate. After dehydration in ethanol and clearing in propylene oxide, embedding in Agar 100 was performed according to standard protocols [<xref ref-type="bibr" rid="scirp.45074-ref34">34</xref>] . Sections were stained in 5% uranyl acetate and 0.4% lead citrate.</p></sec><sec id="s3_11"><title>2.11. Scanning Electron Microscopy (SEM)</title><p>For SEM, the same fixation as described above was applied. Cells were sequentially dehydrated in 50% and 70% ethanol. Samples were placed onto poly-L-lysine-coated slides and incubated for 8 h in 96% and 100% ethanol. After critical point drying, cells were metalized with Pd-Au. For SEM, a Cambridge Stereo Scan 250 Mk2 was used in the group of Oliver Betz (evolution biology of invertebrates, University of T&#252;bingen).</p></sec></sec><sec id="s4"><title>3. Results</title><p>DNA sequence analysis of TbEndoG clearly revealed its affiliation with the endonuclease superfamily containing a ββα-structure, its structure binding domains of divalent metal ions with essential histidine and asparagine residues and the active site as present in other previously reported EndoG molecules. Like in other trypanosomatids the aspartate residue (D) is substituted by serine (S) in the trypanosomal DRGH motif (<xref ref-type="fig" rid="fig1">Figure 1</xref>) [<xref ref-type="bibr" rid="scirp.45074-ref17">17</xref>] [<xref ref-type="bibr" rid="scirp.45074-ref20">20</xref>] .</p><p>Since EndoG is a membrane associated protein that may even possess a small transmembrane domain, expression and purification as a soluble protein proved rather difficult. Thus rTbEndoG containing a His-tag was always expressed in bacterial inclusion bodies, despite our numerous modifications of the expression protocol. Consequently, the protein was re-solubilized from inclusion bodies using 1% N-lauroylsarcosine and then slowly refolded in 20 mM Tris-HCl (pH 7.5, containing 300 mM NaCl and 0.1% Triton X-100) on a Ni-NTA column. <xref ref-type="fig" rid="fig2">Figure 2</xref>(a) shows the purified protein as analysed by Western blotting using a commercially available anti-6xHis antibody. The aberrant size of the detected protein (~66 kDa) proved different as compared to the predicted size of 59.3 kDa (including the His-tag), but this has also been observed in previous studies [<xref ref-type="bibr" rid="scirp.45074-ref35">35</xref>] [<xref ref-type="bibr" rid="scirp.45074-ref36">36</xref>] .</p><p>After refolding and elution from the Ni-NTA column, nuclease activity was restored, as evaluated using an activity assay (<xref ref-type="fig" rid="fig2">Figure 2</xref>(b)). Both recombinant forms of the enzyme, i.e. with and without His-tag, showed nuclease activity with plasmid DNA as substrate. This activity was Mg<sup>2+</sup>-dependent. Obviously, the His-tag does not affect the correct refolding of rTbEndoG. As divalent metal ions act as cofactors for EndoG, we also tested different metal compounds. Similarly to other nucleases, rTbEndoG showed a higher activity with Mg<sup>2+</sup> than with Mn<sup>2+</sup> (data not shown). However, the enzyme was inactive in the presence of Zn<sup>2+</sup>, consistent with earlier reports showing that EndoG of other organisms were inhibited by Zn<sup>2+</sup> and Fe<sup>2+</sup> [<xref ref-type="bibr" rid="scirp.45074-ref35">35</xref>] .</p><p>Overexpression of TbEndoG in SMB trypanosomes showed no obvious phenotypic changes, but it significantly inhibited the parasite’s growth. Trypanosomes overexpressing TbEndoG (even when not induced by doxycycline) grew significantly slower with a generation doubling time of 24 h, as compared to 6 h of control SMB cells (<xref ref-type="fig" rid="fig3">Figure 3</xref>(a)). Induction of TbEndoG overexpression with 10 &#181;g/ml doxycycline led to a fully inhibited growth. This growth inhibition was abrogated by adding esiRNA against TbEndoG (<xref ref-type="fig" rid="fig3">Figure 3</xref>(b)). In contrast, addition of esiRNA or knock down of TbEndoG using RNAi to control SMB cells showed no morphological alterations and no changes of the generation doubling time.</p><p>To investigate the role of TbEndoG during apoptosis, trypanosomes were treated with PGD<sub>2</sub> or staurosporine. Measuring the intracellular levels of TbEndoG by qRT-PCR, TbEndoG overexpressing cells showed an approximately 7 folds higher mRNA level and thus probably a likewise increased enzyme level than the respective control SMB cells. Following apoptosis induction by addition of PGD<sub>2</sub>, the EndoG level increased 3 folds in control SMB cells, but remained constant in TbEndoG overexpressing cells. To control for loading differences, tubulin expression in respective cells was set to 1 (<xref ref-type="fig" rid="fig4">Figure 4</xref>). For additional loading control expression of GAP-DH was used.</p><p>Transmission electron microscopy of trypanosomes overexpressing TbEndoG and induced for 24 h by 10 &#181;g/ml doxycycline revealed a significant increase in the number of glycosomes and densely packed acidocalcisomes as compared to control SMB cells (<xref ref-type="fig" rid="fig5">Figure 5</xref>).</p><p>In contrast to the known phenotypic changes after PGD<sub>2</sub> treatment (occurrence of two or more flagella in one flagella pocket due to a cell cycle arrest in the G1 phase), in STS treated cells a considerable morphological change occurred. As shown by scanning electron microscopy, the cell body switched from a stretched to a ball-like structure (<xref ref-type="fig" rid="fig6">Figure 6</xref>(a)). Concomitantly, transmission electron microscopy revealed that this change was due to an extremely enlarged flagella pocket (<xref ref-type="fig" rid="fig6">Figure 6</xref>(b)), which was still in the process of taking up more vesicles.</p><p>There is a well-known set of different markers to characterize apoptosis in general [<xref ref-type="bibr" rid="scirp.45074-ref37">37</xref>] -[<xref ref-type="bibr" rid="scirp.45074-ref39">39</xref>] and caspase-free apoptosis in particular [<xref ref-type="bibr" rid="scirp.45074-ref40">40</xref>] . Beside microscopic techniques including fluorescence and electron microscopy, we used especially flow cytometry analysis to detect characteristic intracellular apoptosis markers. As described earlier, increased levels of reactive oxygen species (ROS) like H<sub>2</sub>O<sub>2</sub> or hydroxyl radicals is indicative of caspase-independent apoptosis in trypanosomes [<xref ref-type="bibr" rid="scirp.45074-ref2">2</xref>] as well as in higher eukaryotes [<xref ref-type="bibr" rid="scirp.45074-ref41">41</xref>] . We here used different reagents to characterize which ROS is formed due to PGD<sub>2</sub> or STS induced apoptosis. As a commonly used and rather unspecific ROS detection reagent we used 2’,7’-dichlorodihydrofluorescein diacetate (H<sub>2</sub>DCFDA). Getting positive results with this reagent, indicative of ROS formation in general (<xref ref-type="fig" rid="fig7">Figure 7</xref>(a)), we applied 3’- (p-aminophenyl) fluorescein (APF), which is more specific and used to detect hydroxyl radicals (HO•),</p><p>hypochlorite anions (<sup>–</sup>OCl) and peroxynitrite anions (ONOO<sup>–</sup>). Analysis of untreated and treated SMB cells stained with APF showed no fluorescence, thus omitting these ROS as participants in the apoptosis pathway in T. brucei. The next reagent used for ROS detection was dihydroethidium (DHE), which is rather specific for the superoxide anion (<inline-formula><inline-graphic xlink:href="tmlimages\2-2480013x\da91e53a-fca7-45a6-94e2-d7d2ba098fd6.png" xlink:type="simple"/></inline-formula>). Compared with untreated SMB trypanosomes, DHE detected significantly increased levels of superoxide anions in PGD<sub>2</sub> or STS treated SMB cells (<xref ref-type="fig" rid="fig7">Figure 7</xref>(b)), leading to the conclusion that this ROS is actively involved in the parasite’s apoptosis pathway. This is consistent with data reported for T. cruzi, where mitochondrial superoxide anions serve as a key mediator for the initiation of the apoptotic death process [<xref ref-type="bibr" rid="scirp.45074-ref42">42</xref>] .</p><p>As ROS may induce membrane ruptures, the predicted next steps in caspase-independent apoptosis are a breakdown of the inner mitochondrial membrane potential and the release of mitochondrial material into the cytosol. Amongst the latter are pro-apoptotic factors like AIF and EndoG.</p><p>Loss of mitochondrial membrane potential was confirmed by TMRE staining. While 97% of SMB control cells showed an intact mitochondrial membrane potential and were thus TMRE positive, 65% of PGD<sub>2</sub> and 85% of STS treated cells proved to be TMRE negative after 24 h. This effect strongly increased in TbEndoG overexpressing cells, where 90% of SMB control cells showed an intact mitochondrial membrane and were thus TMRE positive, while 89% of PGD<sub>2</sub> and 95% of STS treated cells were TMRE negative after 24 h (<xref ref-type="fig" rid="fig7">Figure 7</xref>(a)).</p><p>After a 24 h incubation of trypanosomes in the presence of 10 &#181;M PGD<sub>2</sub> or 10 nM STS, 21% or 27% of cell nuclei showed DNA fragmentation as confirmed by PI staining. Similarly, DNA fragmentation in TbEndoG overexpressing cells was 31% or 64%, respectively.</p><p>An often occurring sign of apoptosis is also a cell cycle arrest in the G1 phase. Therefore we lysed trypanosomes with 6 mM digitonin and measured the DNA content of trypanosomal nuclei. Treatment of SMB cells with PGD<sub>2</sub> or STS caused a decrease of 21% or 31% of cells in the G1 phase, respectively. In STS but not in PGD<sub>2</sub> treated cells an increase of 14% of cells in the G2 phase was observed after 24 h (<xref ref-type="fig" rid="fig8">Figure 8</xref>(a)).</p><p>Phosphatidylserine exposure on the outer membrane leaflet was detected using annexin-V staining. An increase of up to 65% annexin-V positive cells as compared to SMB control cells could be observed during apoptosis induction with PGD<sub>2</sub> or STS (<xref ref-type="fig" rid="fig8">Figure 8</xref>(b)).</p><p>Expression of eGFP or TbEndoG-eGFP fusion protein, respectively, had no effect on the parasite’s growth upon induction of the expression of either protein by 10 &#181;g/ml doxycycline. As shown in <xref ref-type="fig" rid="fig3">Figure 3</xref>(c), growth of TbEndoG-eGFP expressing cells was inhibited, while cells expressing only eGFP grew normally. We used TbEndoG-eGFP expressing cells in our studies to detect EndoG localization after induction of apoptosis by fluorescence microscopy. Evaluation of PGD<sub>2</sub> or STS treated cells by fluorescence microscopy clearly showed release of TbEndoG out of the mitochondrion. It is not clear so far whether or not the EndoG trans-membrane domain is thereby cleaved. Nevertheless, an active translocation during apoptosis stimuli into the nucleus could not be observed. To avoid false positive immunofluorescence results we used a TbEndoG-eGFP fusion protein and Mitotracker Red CMXRos staining for mitochondrial localization and DAPI for nuclei localization (<xref ref-type="fig" rid="fig9">Figure 9</xref>). After PGD<sub>2</sub> or STS treatment, TbEndoG-eGFP is distributed all over the cytosol and is also included in the nucleus (<xref ref-type="fig" rid="fig9">Figure 9</xref>(b)). Expression of eGFP was validated by Western blot analysis.</p></sec><sec id="s5"><title>4. Discussion</title><p>The molecular mechanism of apoptosis in higher eukaryotes is well investigated and its necessity for the functional development and maintenance of multicellular organisms has been shown. During the last years, several orthologs of mammalian apoptotic proteins have been discovered and apoptotic processes similar to those in higher organisms were demonstrated in different single-cell organisms. However, the mechanisms and proteins involved in this pathway are still poorly described and not well understood.</p><p>Since endonuclease G has been identified as a protein involved in caspase-independent DNA fragmentation in metazoan and protozoan organisms [<xref ref-type="bibr" rid="scirp.45074-ref14">14</xref>] [<xref ref-type="bibr" rid="scirp.45074-ref17">17</xref>] [<xref ref-type="bibr" rid="scirp.45074-ref21">21</xref>] [<xref ref-type="bibr" rid="scirp.45074-ref36">36</xref>] we investigated its role during apoptosis in T. brucei induced by PGD<sub>2</sub> or staurosporine, respectively.</p><p>The results presented in this work demonstrate that TbEndoG is an endonuclease which degrades DNA in the presence of Mg<sup>2+</sup> or Mn<sup>2+</sup> ions. Like other EndoGs of higher eukaryotes it localizes to the single mitochondrion of trypanosomes, probably because of an N-terminal signal sequence. However, in contrast to EndoGs from metazoa or leishmania, this mitochondrial localization sequence (mls) of TbEndoG seems considerably different, although it is recognized as a putative mls by prediction tools like MitoProtII or PrediSi. Firstly, it does not contain the classical sequence of an alternating pattern of hydrophobic and positively charged amino acids, and secondly it is about 30 amino acids longer than the respective leishmania counterpart. In addition, following the mitochondrial import, the mls is usually cleaved by a specific peptidase (like in AIF) to produce the mature form, which is inserted into the inner membrane via an N-terminal transmembrane domain. AIF release requires then the intrusion of a not yet identified protease, which cleaves AIF62 to a soluble AIF57. If this mechanism would also apply for TbEndoG release in trypanosomes, a putative nuclear targeting signal of 4 amino acids (recognized by prediction tools like PSORT) would also be cleaved off since it is part of the mls. Since data from another study indicate that the mls of TbEndoG might not been cleaved in T. brucei [<xref ref-type="bibr" rid="scirp.45074-ref36">36</xref>] , we favour the idea that TbEndoG is not translocated to the matrix, but to the intermembrane space of the mitochondrion. During permeabilization of the outer mitochondrial membrane in the course of apoptosis, TbEndoG may be released into the cytosol, and translocates most likely as part of a DNA-degradation complex together with other nucleases into the nucleus to cleave DNA [<xref ref-type="bibr" rid="scirp.45074-ref16">16</xref>] [<xref ref-type="bibr" rid="scirp.45074-ref21">21</xref>] .</p><p>Taken together, our results, together with those presented by other authors [<xref ref-type="bibr" rid="scirp.45074-ref36">36</xref>] , demonstrate that T. brucei expresses an ortholog of metazoan and protozoan EndoG that participates in the caspase-independent apoptosis pathway, which is triggered by different stimuli as shown here. In response to PGD<sub>2</sub> or STS treatment, TbEndoG is released out of the mitochondrion into cytosol and nucleus. As shown here, T. brucei has the ability to undergo these processes in different kinds of manner. In the presence of either compound, overexpression of EndoG leads to a significant acceleration of apoptotic cell death. We thus conclude that, although this protein is not necessary for survival of trypanosomes (as reduced expression of TbEndoG by knock down had no effect on cell growth in vitro), it is involved in cell degradation processes. Our data also reveal that overexpression of EndoG leads to a significant inhibition of trypanosomal growth, indicating that EndoG is not only acting as a pro apoptotic enzyme or is only active following apoptosis induction, but is also responsible for the homeostasis of cells.</p><p>We conclude from our results that formation of intracellular ROS, especially superoxide anion formation is an early step in protozoan caspase-independent apoptosis, followed by mitochondrial membrane disruption and release of EndoG into the cytosol. In addition, phosphatidylserine exposure on the outer leaflet of plasma membrane occurs as it is the case in other organisms. In contrast to PGD<sub>2</sub> treated cells, a shift from G1 to G2 phase occurs in STS treated cells. As a last detectable step, DNA fragmentation was detected in both cases of apoptosis induction.</p><p>Furthermore, we here demonstrate that STS is a potent apoptosis inducer in T. brucei which, compared to the established apoptosis inducer PGD<sub>2</sub> (IC<sub>50</sub> of 3.7 &#181;M), is effective in very low concentrations (IC<sub>50</sub> of 7.6 nM). However, one has to keep in mind that PGD<sub>2</sub> binds very effectively to serum proteins, which are indispensable for axenic cultivation of the parasite [<xref ref-type="bibr" rid="scirp.45074-ref2">2</xref>] . We thus still consider PGD<sub>2</sub> as a physiological apoptosis inducer for an effective cell density control especially during brain infection [<xref ref-type="bibr" rid="scirp.45074-ref22">22</xref>] . STS, in contrast, may act as a general inhibitor of phosphorylation, be involved in several processes of cellular regulation and thus lead to the observed differences of apoptotic progression.</p><p>EndoG is localized to the single mitochondrion of trypanosomes and is absent from the nucleus under normal growth conditions in control and SMB cells expressing TbEndoG-eGFP. Additionally, these cells were less inhibited in growth as compared to TbEndoG overexpressing cells in consequence of the used expression vector even after induction with doxycycline. Fluorescence microscopy confirmed localization in the mitochondrion as MitoTracker<sup>&#174;</sup> Red CMXRos was used to stain mitochondria.</p><p>After PGD<sub>2</sub> or STS treatment, TbEndoG-eGFP was released and distributed throughout the cytosol and within the nucleus. These observations are consistent with previously described effects of EndoG in other organisms. Under no circumstances, however, could we observe that EndoG was exclusively localized to the nucleus. One reason could be that overexpression of TbEndoG-eGFP caused a too high level of EndoG and thus excess quantities remained in the cytosol. Another reason could be that the mitochondrial localization sequence of TbEndoG is cleaved after uptake into the mitochondrion, thus leading to the concomitant loss of the nuclear translocation signal.</p></sec><sec id="s6"><title>5. Conclusion</title><p>In conclusion, we show that trypanosomes possess an apoptotic mechanism to react on different stimuli in several ways. In general, apoptosis occurs as described with ROS formation at the beginning. As shown using flow cytometry, superoxide anion is the main ROS involved in apoptosis induction in T. brucei. Its increased formation in the mitochondrion leads probably to the rupture of the mitochondrial membrane and thus release of EndoG into the cytosol. Here, EndoG, together with other nucleases seems to form a DNA-degradation complex [<xref ref-type="bibr" rid="scirp.45074-ref16">16</xref>] [<xref ref-type="bibr" rid="scirp.45074-ref21">21</xref>] , which fragmentizes the parasite’s DNA in the last step of trypanosomal apoptosis. As trypanosomes belong to one of the most ancient diverging branches of the eukaryotic phytogenic tree and are amongst the first eukaryotes with a mitochondrion, our results offer an insight in apoptosis development and how complex these simple organisms can react on different stimuli. Moreover, as our results evinced, STS might be an interesting inducer of apoptotic cell death in T. brucei for further investigations on anti-parasitic drug development.</p></sec><sec id="s7"><title>Abbreviations</title><p>CAD, caspase-activated DNase;</p><p>eGFP, enhanced green fluorescent protein;</p><p>EndoG, mitochondrial endonuclease G;</p><p>IPTG, isopropyl-beta-d-thiogalactopyranoside;</p><p>rTbEndoG, Trypanosoma brucei recombinant EndoG;</p><p>PGD<sub>2</sub>, prostaglandin D<sub>2</sub>;</p><p>SMB, single marker blood-stream form;</p><p>STS, staurosporine</p></sec><sec id="s8"><title>NOTES</title></sec></body><back><ref-list><title>References</title><ref id="scirp.45074-ref1"><label>1</label><mixed-citation publication-type="other" xlink:type="simple">Debrabant, A., Lee, N., Bertholet, S., Duncan, R. and Nakhasi, H.L. (2003) Programmed Cell Death in Trypanosomatids and Other Unicellular Organisms. International Journal for Parasitology, 33, 257-267. http://dx.doi.org/10.1016/S0020-7519(03)00008-0</mixed-citation></ref><ref id="scirp.45074-ref2"><label>2</label><mixed-citation publication-type="other" xlink:type="simple">Figarella, K., Rawer, M., Uzcategui, N.L., Kubata, B.K., Lauber, K., et al. (2005) Prostaglandin D2 Induces Programmed Cell Death in Trypanosoma brucei Bloodstream Form. Cell Death &amp; Differentiation, 12, 335-346. http://dx.doi.org/10.1038/sj.cdd.4401564</mixed-citation></ref><ref id="scirp.45074-ref3"><label>3</label><mixed-citation publication-type="other" xlink:type="simple">Figarella, K., Uzcategui, N.L., Beck, A., Schoenfeld, C., Kubata, B.K., et al. (2006) Prostaglandin-Induced Programmed Cell Death in Trypanosoma brucei Involves Oxidative Stress. Cell Death &amp; Differentiation, 13, 1802-1814. http://dx.doi.org/10.1038/sj.cdd.4401862</mixed-citation></ref><ref id="scirp.45074-ref4"><label>4</label><mixed-citation publication-type="other" xlink:type="simple">Lee, N., Bertholet, S., Debrabant, A., Muller, J., Duncan, R., et al. (2002) Programmed Cell Death in the Unicellular Protozoan Parasite Leishmania. Cell Death &amp; Differentiation, 9, 53-64. http://dx.doi.org/10.1038/sj.cdd.4400952</mixed-citation></ref><ref id="scirp.45074-ref5"><label>5</label><mixed-citation publication-type="other" xlink:type="simple">Desjeux, P. (2004) Leishmaniasis: Current Situation and New Perspectives. Comparative Immunology Microbiology and Infectious Diseases, 27, 305-318. http://dx.doi.org/10.1016/j.cimid.2004.03.004</mixed-citation></ref><ref id="scirp.45074-ref6"><label>6</label><mixed-citation publication-type="other" xlink:type="simple">Kubata, B.K., Duszenko, M., Kabututu, Z., Rawer, M., Szallies, A., et al. (2000) Identification of a Novel Prostaglandin f(2alpha) Synthase in Trypanosoma brucei. Journal of Experimental Medicine, 192, 1327-1338. http://dx.doi.org/10.1084/jem.192.9.1327</mixed-citation></ref><ref id="scirp.45074-ref7"><label>7</label><mixed-citation publication-type="other" xlink:type="simple">Madeo, F., Frohlich, E., Ligr, M., Grey, M., Sigrist, S.J., et al. (1999) Oxygen Stress: A Regulator of Apoptosis in Yeast. Journal of Cell Biology, 145, 757-767. http://dx.doi.org/10.1083/jcb.145.4.757</mixed-citation></ref><ref id="scirp.45074-ref8"><label>8</label><mixed-citation publication-type="other" xlink:type="simple">Frohlich, K.U. and Madeo, F. (2000) Apoptosis in Yeast—A Monocellular Organism Exhibits Altruistic Behaviour. FEBS Letters, 473, 6-9. http://dx.doi.org/10.1016/S0014-5793(00)01474-5</mixed-citation></ref><ref id="scirp.45074-ref9"><label>9</label><mixed-citation publication-type="other" xlink:type="simple">Christensen, S.T., Kemp, K., Quie, H. and Rasmussen, L. (1996) Cell Death, Survival and Proliferation in Tetrahymena thermophila. Effects of Insulin, Sodium Nitroprusside, 8-Bromo Cyclic GMP, NG-Methyl-L-arginine and Methylene Blue. Cell Biology International, 20, 653-666. http://dx.doi.org/10.1006/cbir.1996.0087</mixed-citation></ref><ref id="scirp.45074-ref10"><label>10</label><mixed-citation publication-type="other" xlink:type="simple">Arnoult, D., Tatischeff, I., Estaquier, J., Girard, M., Sureau, F., et al. (2001) On the Evolutionary Conservation of the Cell Death Pathway: Mitochondrial Release of an Apoptosis-Inducing Factor during Dictyostelium discoideum Cell Death. Molecular Biology of the Cell, 12, 3016-3030. http://dx.doi.org/10.1091/mbc.12.10.3016</mixed-citation></ref><ref id="scirp.45074-ref11"><label>11</label><mixed-citation publication-type="other" xlink:type="simple">Engelberg-Kulka, H., Amitai, S., Kolodkin-Gal, I. and Hazan, R. (2006) Bacterial Programmed Cell Death and Multi-cellular Behavior in Bacteria. PLoS Genet, 2, Article ID: e135. 
http://dx.doi.org/10.1371/journal.pgen.0020135</mixed-citation></ref><ref id="scirp.45074-ref12"><label>12</label><mixed-citation publication-type="other" xlink:type="simple">Bayles, K.W. (2003) Are the Molecular Strategies That Control Apoptosis Conserved in Bacteria? Trends in Microbiology, 11, 306-311. http://dx.doi.org/10.1016/S0966-842X(03)00144-6</mixed-citation></ref><ref id="scirp.45074-ref13"><label>13</label><mixed-citation publication-type="other" xlink:type="simple">Welburn, S.C., Macleod, E., Figarella, K. and Duzensko, M. (2006) Programmed Cell Death in African Trypanosomes. Parasitology, 132, S7-S18. http://dx.doi.org/10.1017/S0031182006000825</mixed-citation></ref><ref id="scirp.45074-ref14"><label>14</label><mixed-citation publication-type="other" xlink:type="simple">Li, L.Y., Luo, X. and Wang, X. (2001) Endonuclease G Is an Apoptotic DNase When Released from Mitochondria. Nature, 412, 95-99. http://dx.doi.org/10.1038/35083620</mixed-citation></ref><ref id="scirp.45074-ref15"><label>15</label><mixed-citation publication-type="other" xlink:type="simple">Ohsato, T., Ishihara, N., Muta, T., Umeda, S., Ikeda, S., et al. (2002) Mammalian Mitochondrial Endonuclease G. Digestion of R-Loops and Localization in Intermembrane Space. European Journal of Biochemistry, 269, 5765-5770. http://dx.doi.org/10.1046/j.1432-1033.2002.03238.x</mixed-citation></ref><ref id="scirp.45074-ref16"><label>16</label><mixed-citation publication-type="other" xlink:type="simple">BoseDasgupta, S., Das, B.B., Sengupta, S., Ganguly, A., Roy, A., Dey, S., Tripathi, G., Dinda, B. and Majumder, H.K. (2008) The Caspase-Independent Algorithm of Programmed Cell Death in Leishmania Induced by Baicalein: The Role of LdEndoG, LdFEN-1 and LdTatD as a DNA “Degradesome”. Cell Death and Differentiation, 15, 1629-1640. http://dx.doi.org/10.1038/cdd.2008.85</mixed-citation></ref><ref id="scirp.45074-ref17"><label>17</label><mixed-citation publication-type="other" xlink:type="simple">Rico, E., Alzate, J.F., Arias, A.A., Moreno, D., Clos, J., Gagod, F., Morenoe, I., Domíngueze, M. and Jiménez-Ruiz, A. (2009) Leishmania infantum Expresses a Mitochondrial Nuclease Homologous to EndoG that Migrates to the Nucleus in Response to an Apoptotic Stimulus. Molecular and Biochemical Parasitology, 163, 28-38. http://dx.doi.org/10.1016/j.molbiopara.2008.09.007</mixed-citation></ref><ref id="scirp.45074-ref18"><label>18</label><mixed-citation publication-type="other" xlink:type="simple">Cote, J. and Ruiz-Carrillo, A. (1993) Primers for Mitochondrial DNA Replication Generated by Endonuclease G. Sci- ence, 261, 765-769. http://dx.doi.org/10.1126/science.7688144</mixed-citation></ref><ref id="scirp.45074-ref19"><label>19</label><mixed-citation publication-type="other" xlink:type="simple">Low, R.L. (2003) Mitochondrial Endonuclease G Function in Apoptosis and mtDNA Metabolism: A Historical Perspective. Mitochondrion, 2, 225-236. http://dx.doi.org/10.1016/S1567-7249(02)00104-6</mixed-citation></ref><ref id="scirp.45074-ref20"><label>20</label><mixed-citation publication-type="other" xlink:type="simple">Schafer, P., Scholz, S.R., Gimadutdinow, O., Cymerman, I.A., Bujnicki, J.M., Ruiz-Carrillo, A., Pingoud, A. and Meiss, G. (2004) Structural and Functional Characterization of Mitochondrial EndoG, a Sugar Non-Specific Nuclease Which Plays an Important Role during Apoptosis. Journal of Molecular Biology, 338, 217-228. http://dx.doi.org/10.1016/j.jmb.2004.02.069</mixed-citation></ref><ref id="scirp.45074-ref21"><label>21</label><mixed-citation publication-type="other" xlink:type="simple">Parrish, J., Li, L., Klotz, K., Ledwich, D., Wang, X.D. and Xue, D. (2001) Mitochondrial Endonuclease G Is Important for Apoptosis in C. elegans. Nature, 412, 90-94. http://dx.doi.org/10.1038/35083608</mixed-citation></ref><ref id="scirp.45074-ref22"><label>22</label><mixed-citation publication-type="other" xlink:type="simple">Wolburg, H., Mogk, S., Acker, S., Frey, C., Meinert, M., Sch?nfeld, C., Lazarus, M., Urade, Y., Kubata, B.K. and Duszenko, M. (2012) Late Stage Infection in Sleeping Sickness. PLoS ONE, 7, Article ID: e34304. http://dx.doi.org/10.1371/journal.pone.0034304 </mixed-citation></ref><ref id="scirp.45074-ref23"><label>23</label><mixed-citation publication-type="other" xlink:type="simple">Arnoult, D., Akarid, K., Grodet, A., Petit, P.X., Estaquier, J. and Ameisen, J.C. (2002) On the Evolution of Programmed Cell Death: Apoptosis of the Unicellular Eukaryote Leishmana Major Involves Cysteine Proteinase Activation and Mitochondrion Permeabilization. Cell Death and Differentiation, 9, 65-81. http://dx.doi.org/10.1038/sj.cdd.4400951</mixed-citation></ref><ref id="scirp.45074-ref24"><label>24</label><mixed-citation publication-type="journal" xlink:type="simple"><name name-style="western"><surname>Bruno</surname><given-names> S.</given-names></name>,<name name-style="western"><surname> Ardelt</surname><given-names> B.</given-names></name>,<name name-style="western"><surname> Skierski</surname><given-names> J.S.</given-names></name>,<name name-style="western"><surname> Traganos</surname><given-names> F. and Darzynkiewicz</given-names></name>,<name name-style="western"><surname> Z. </surname><given-names>  </given-names></name>,<etal>et al</etal>. (<year>1992</year>)<article-title>Different Effects of Staurosporine, an Inhibitor of Protein Kinases, on the Cell Cycle and Chromatin Structure of Normal and Leukemic Lymphocytes</article-title><source> Cancer Research</source><volume> 52</volume>,<fpage> 470</fpage>-<lpage>473</lpage>.<pub-id pub-id-type="doi"></pub-id></mixed-citation></ref><ref id="scirp.45074-ref25"><label>25</label><mixed-citation publication-type="other" xlink:type="simple">Belmokhtar, C.A., Torriglia, A., Counis, M.F., Courtois, Y., Jacquemin-Sablon, A. and Ségal-Bendirdjian, E. (2000) Nuclear Translocation of a Leukocyte Elastase Inhibitor/Elastase Complex during Staurosporine-Induced Apoptosis: Role in the Generation of Nuclear L-DNase II Activity. Experimental Cell Research, 254, 99-109. http://dx.doi.org/10.1006/excr.1999.4737</mixed-citation></ref><ref id="scirp.45074-ref26"><label>26</label><mixed-citation publication-type="other" xlink:type="simple">Belmokhtar, C.A., Hillion, J. and Segal-Bendirdjian, E. (2001) Staurosporine Induces Apoptosis through both Caspase-Dependent and Caspase-Independent Mechanisms. Oncogene, 20, 3354-3362. http://dx.doi.org/10.1038/sj.onc.1204436</mixed-citation></ref><ref id="scirp.45074-ref27"><label>27</label><mixed-citation publication-type="other" xlink:type="simple">Johansson, A.C., Steen, H., Ollinger, K. and Roberg, K. (2003) Cathepsin D Mediates Cytochrome c Release and Caspase Activation in Human Fibroblast Apoptosis Induced by Staurosporine. Cell Death and Differentiation, 10, 1253-1259. http://dx.doi.org/10.1038/sj.cdd.4401290</mixed-citation></ref><ref id="scirp.45074-ref28"><label>28</label><mixed-citation publication-type="other" xlink:type="simple">Pimentel-Elardo, S.M., Kozytska, S., Bugni, T.S., Ireland, C.M., Moll, H. and Hentschel, U. (2010) Anti-Parasitic Compounds from Streptomyces sp. Strains Isolated from Mediterranean Sponges. Marine Drugs, 8, 373-380. http://dx.doi.org/10.3390/md8020373</mixed-citation></ref><ref id="scirp.45074-ref29"><label>29</label><mixed-citation publication-type="journal" xlink:type="simple"><name name-style="western"><surname>Gale Jr.</surname><given-names> M.</given-names></name>,<name name-style="western"><surname> Carter</surname><given-names> V. and Parsons</given-names></name>,<name name-style="western"><surname> M. </surname><given-names>  </given-names></name>,<etal>et al</etal>. (<year>1994</year>)<article-title>Cell Cycle-Specific Induction of an 89 kDa Serine/Threonine Protein Kinase Activity in Trypanosoma Brucei</article-title><source> Journal of Cell Science</source><volume> 107</volume>,<fpage> 1825</fpage>-<lpage>1832</lpage>.<pub-id pub-id-type="doi"></pub-id></mixed-citation></ref><ref id="scirp.45074-ref30"><label>30</label><mixed-citation publication-type="other" xlink:type="simple">Malaquias, A.T. and Oliveira, M.M. (1999) Phospholipid Signalling Pathways in Trypanosoma cruzi Growth Control. Acta Tropica, 73, 93-108. http://dx.doi.org/10.1016/S0001-706X(99)00016-9</mixed-citation></ref><ref id="scirp.45074-ref31"><label>31</label><mixed-citation publication-type="other" xlink:type="simple">Duszenko, M., Figarella, K., Macleod, E.T. and Welburn, S.C. (2006) Death of a Trypanosome: A Selfish Altruism. Trends in Parasitology, 22, 536-542. http://dx.doi.org/10.1016/j.pt.2006.08.010</mixed-citation></ref><ref id="scirp.45074-ref32"><label>32</label><mixed-citation publication-type="other" xlink:type="simple">Debrabant, A. and Nakhasi, H. (2003) Programmed Cell Death in Trypanosomatids: Is It an Altruistic Mechanism for Survival of the Fittest? Kinetoplastid Biology and Disease, 2, 7. http://dx.doi.org/10.1186/1475-9292-2-7</mixed-citation></ref><ref id="scirp.45074-ref33"><label>33</label><mixed-citation publication-type="other" xlink:type="simple">Wirtz, E., Leal, S., Ochatt, C. and Cross, G.A. (1999) A Tightly Regulated Inducible Expression System for Conditional Gene Knock-Outs and Dominant-Negative Genetics in Trypanosoma brucei. Molecular and Biochemical Parasitology, 99, 89-101.http://dx.doi.org/10.1016/S0166-6851(99)00002-X</mixed-citation></ref><ref id="scirp.45074-ref34"><label>34</label><mixed-citation publication-type="journal" xlink:type="simple"><name name-style="western"><surname>Glauert</surname><given-names> A.M.</given-names></name>,<name name-style="western"><surname> Butterworth</surname><given-names> A.E.</given-names></name>,<name name-style="western"><surname> Sturrock</surname><given-names> R.F. and Houba</given-names></name>,<name name-style="western"><surname> V. </surname><given-names>  </given-names></name>,<etal>et al</etal>. (<year>1978</year>)<article-title>The Mechansim of Antibody-Dependent, Eo- sinophil-Mediated Damage to Schistosomula of Schistosoma Mansoni in Vitro: A Study by Phase-Contrast and Electron Microscopy</article-title><source> Journal of Cell Science</source><volume> 34</volume>,<fpage> 173</fpage>-<lpage>192</lpage>.<pub-id pub-id-type="doi"></pub-id></mixed-citation></ref><ref id="scirp.45074-ref35"><label>35</label><mixed-citation publication-type="journal" xlink:type="simple"><name name-style="western"><surname>Widlak</surname><given-names> P.</given-names></name>,<name name-style="western"><surname> Li</surname><given-names> L.Y.</given-names></name>,<name name-style="western"><surname> Wang</surname><given-names> X. and Garrard</given-names></name>,<name name-style="western"><surname> W.T. </surname><given-names>  </given-names></name>,<etal>et al</etal>. (<year>2001</year>)<article-title>Action of Recombinant Human Apoptotic Endonuclease G on Naked DNA and Chromatin Substrates: Cooperation with Exonuclease and DNase I</article-title><source> Journal of Biological Chemistry</source><volume> 276</volume>,<fpage> 48404</fpage>-<lpage>48409</lpage>.<pub-id pub-id-type="doi"></pub-id></mixed-citation></ref><ref id="scirp.45074-ref36"><label>36</label><mixed-citation publication-type="other" xlink:type="simple">Gannavaram, S., Vedvyas, C. and Debrabant, A. (2008) Conservation of the Pro-Apoptotic Nuclease Activity of Endonuclease G in Unicellular Trypanosomatid Parasites. Journal of Cell Science, 121, 99-109. http://dx.doi.org/10.1242/jcs.014050</mixed-citation></ref><ref id="scirp.45074-ref37"><label>37</label><mixed-citation publication-type="journal" xlink:type="simple"><name name-style="western"><surname>Steensma</surname><given-names> D.P.</given-names></name>,<name name-style="western"><surname> Timm</surname><given-names> M. and Witzig</given-names></name>,<name name-style="western"><surname> T.E. </surname><given-names>  </given-names></name>,<etal>et al</etal>. (<year>2003</year>)<article-title>Flow Cytometric Methods for Detection and Quantification of Apoptosis</article-title><source> Methods in Molecular Medicine</source><volume> 85</volume>,<fpage> 323</fpage>-<lpage>332</lpage>.<pub-id pub-id-type="doi"></pub-id></mixed-citation></ref><ref id="scirp.45074-ref38"><label>38</label><mixed-citation publication-type="other" xlink:type="simple">Elmore, S. (2007) Apoptosis: A Review of Programmed Cell Death. Toxicologic Pathology, 35, 495-516. http://dx.doi.org/10.1080/01926230701320337</mixed-citation></ref><ref id="scirp.45074-ref39"><label>39</label><mixed-citation publication-type="other" xlink:type="simple">Riccardi, C. and Nicoletti, I. (2006) Analysis of Apoptosis by Propidium Iodide Staining and Flow Cytometry. Nature Protocols, 1, 1458-1461. http://dx.doi.org/10.1038/nprot.2006.238</mixed-citation></ref><ref id="scirp.45074-ref40"><label>40</label><mixed-citation publication-type="other" xlink:type="simple">Jimenez-Ruiz, A., Alzate, J.F., Macleod, E.T., Luder, C.G., Fasel, N. and Hurd, H. (2010) Apoptotic Markers in Protozoan Parasites. Parasites &amp; Vectors, 3, 104.</mixed-citation></ref><ref id="scirp.45074-ref41"><label>41</label><mixed-citation publication-type="other" xlink:type="simple">Kroemer, G. and Martin, S.J. (2005) Caspase-Independent Cell Death. Nature Medicine, 11, 725-730. http://dx.doi.org/10.1038/nm1263</mixed-citation></ref><ref id="scirp.45074-ref42"><label>42</label><mixed-citation publication-type="other" xlink:type="simple">Piacenza, L., Irigoin, F., Alvarez, M.N., Peluffo, G., Taylor, M.C., Kelly, J.M., Wilkinson, S.R. and Radi, R. (2007) Mitochondrial Superoxide Radicals Mediate Programmed Cell Death in Trypanosoma cruzi: Cytoprotective Action of Mitochondrial Iron Superoxide Dismutase Overexpression. Biochemical Journal, 403, 323-334. http://dx.doi.org/10.1042/BJ20061281</mixed-citation></ref></ref-list></back></article>