<?xml version="1.0" encoding="UTF-8"?><!DOCTYPE article  PUBLIC "-//NLM//DTD Journal Publishing DTD v3.0 20080202//EN" "http://dtd.nlm.nih.gov/publishing/3.0/journalpublishing3.dtd"><article xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink" dtd-version="3.0" xml:lang="en" article-type="research article"><front><journal-meta><journal-id journal-id-type="publisher-id">AJAC</journal-id><journal-title-group><journal-title>American Journal of Analytical Chemistry</journal-title></journal-title-group><issn pub-type="epub">2156-8251</issn><publisher><publisher-name>Scientific Research Publishing</publisher-name></publisher></journal-meta><article-meta><article-id pub-id-type="doi">10.4236/ajac.2014.54030</article-id><article-id pub-id-type="publisher-id">AJAC-43709</article-id><article-categories><subj-group subj-group-type="heading"><subject>Articles</subject></subj-group><subj-group subj-group-type="Discipline-v2"><subject>Chemistry&amp;Materials Science</subject></subj-group></article-categories><title-group><article-title>
 
 
  On-Chip Capillary Electrophoresis (Chip-CE) with Optical On-Chip Leaky-Waveguide-Based Detection
 
</article-title></title-group><contrib-group><contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>hristoph</surname><given-names>Doering</given-names></name><xref ref-type="aff" rid="aff1"><sup>1</sup></xref><xref ref-type="corresp" rid="cor1"><sup>*</sup></xref></contrib><contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Matthias</surname><given-names>Grewe</given-names></name><xref ref-type="aff" rid="aff1"><sup>1</sup></xref></contrib><contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Ingo</surname><given-names>Steingoetter</given-names></name><xref ref-type="aff" rid="aff1"><sup>1</sup></xref></contrib><contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Henning</surname><given-names>Fouckhardt</given-names></name><xref ref-type="aff" rid="aff1"><sup>1</sup></xref></contrib></contrib-group><aff id="aff1"><addr-line>Integrated Optoelectronics and Microoptics Research Group, Physics Department, Kaiserslautern University of Technology, Kaiserslautern, Germany</addr-line></aff><author-notes><corresp id="cor1">* E-mail:<email>cdoering@physik.uni-kl.de(HD)</email>;</corresp></author-notes><pub-date pub-type="epub"><day>06</day><month>03</month><year>2014</year></pub-date><volume>05</volume><issue>04</issue><fpage>243</fpage><lpage>248</lpage><history><date date-type="received"><day>20</day>	<month>January</month>	<year>2014</year></date><date date-type="rev-recd"><day>25</day>	<month>February</month>	<year>2014</year>	</date><date date-type="accepted"><day>5</day>	<month>March</month>	<year>2014</year></date></history><permissions><copyright-statement>&#169; Copyright  2014 by authors and Scientific Research Publishing Inc. </copyright-statement><copyright-year>2014</copyright-year><license><license-p>This work is licensed under the Creative Commons Attribution International License (CC BY). http://creativecommons.org/licenses/by/4.0/</license-p></license></permissions><abstract><p>
 
 
  Capillary electrophoresis (CE) suffers from a relatively small sensitivity—at least in case of optical detection transversely to the capillary axis due to the small capillary inner diameters in the range of 50 - 100 μm. Different concepts like bubble, U-, or Z-cells have been used to tackle that problem already in the nineties of the last century. But the U- and Z-cells have typically been extra cells with larger inner channel diameters and no optimization for optical waveguiding and the bubble cell per se did not allow for optical waveguiding. In the case of on-chip capillary electrophoresis (chip-CE) a U-cell can be implemented quite easily on the chip. Here we show how leaky optical waveguiding can be employed to improve optical detection. Proper U-channel design and preparation by wet-chemical etching of the fused silica sub- and superstrate, making the U-channel bend a part of the optical input lens system, can help to achieve high coupling efficiency with loss coefficients around 2 dB and low waveguiding loss.
 
</p></abstract><kwd-group><kwd>On-Chip Capillary Electrophoresis; Optical Aetection; Leaky Waveguides</kwd></kwd-group></article-meta></front><body><sec id="s1"><title>1. Introduction</title><p>Sensitive optical detection is always a problem for capillary electrophoresis due to the small inner diameters of the capillary fluid channel. In case of an optical path transverse to the capillary axis, a bubble cell was used to increase sensitivity [<xref ref-type="bibr" rid="scirp.43709-ref1">1</xref>] -[<xref ref-type="bibr" rid="scirp.43709-ref3">3</xref>] , i.e. a local increase of the capillary diameter by a factor of 3 - 5. One problem with the bubble is that different light rays traverse the bubble via very different paths, some with no interaction with the fluid at all, others with an optical interaction length equal to the full inner bubble diameter, to mention only both extremes. Another concept employs Uor Z-cells, where the middle part of the U or of the Z is used as an optical path [<xref ref-type="bibr" rid="scirp.43709-ref4">4</xref>] -[<xref ref-type="bibr" rid="scirp.43709-ref7">7</xref>] . But typically Uor Z-cells have larger inner channel diameters than the capillary itself and are extra parts of the separation column, which have to be physically attached to the capillary somehow. This leads to dead volumes and thus to a reduction in chromatographic resolution.</p><p>The use of on-chip technologies does not prevent these problems, because still the light path has to be optimized. Much earlier optical waveguiding had been proposed to increase interaction path lengths in cases of integrated solutions [<xref ref-type="bibr" rid="scirp.43709-ref8">8</xref>] [<xref ref-type="bibr" rid="scirp.43709-ref9">9</xref>] ; but the interaction had been performed via the evanescent parts of the optical field only. i.e. the light had mainly been guided in the capillary wall, while the field portion used for interaction with the analyte showed an exponential decay into the fluid (the so-called evanescent field), giving weaker interaction than desired. This will be unavoidable, as long as waveguiding is only understood as the usual waveguiding by total internal reflection, where the main portion of the light field is propagating within an area of high refractive index—like 1.47 for fused silica. In this case the often aqueous analyte solution with a refractive index around 1.33 can only serve as a waveguide cladding with an evanescent field.</p><p>Therefore, leaky waveguiding is an option [<xref ref-type="bibr" rid="scirp.43709-ref10">10</xref>] -[<xref ref-type="bibr" rid="scirp.43709-ref16">16</xref>] , where the waveguide core is free to have any refractive in&#173;dex and transverse layers or regions act as coupled transverse optical resonators for grazing light incidence, redirecting the field into the core, as depicted in <xref ref-type="fig" rid="fig1">Figure 1</xref>. The notion “leaky waveguide” stems from that part of the light power not redirected, causing unavoidable loss. For acceptably low loss waveguiding distances are limited to centior even millimeters. But for inner capillary diameters of 50 - 100 &#181;m the transverse resonators and their production expenditures are not even necessary [<xref ref-type="bibr" rid="scirp.43709-ref17">17</xref>] ; the Fresnel reflections at the single interface bet&#173;ween the fluid and the fused silica wall suffice to achieve acceptably low waveguiding loss.</p><p>In [<xref ref-type="bibr" rid="scirp.43709-ref17">17</xref>] we also showed exemplarily for hyper Rayleigh scattering (HRS [<xref ref-type="bibr" rid="scirp.43709-ref18">18</xref>] [<xref ref-type="bibr" rid="scirp.43709-ref19">19</xref>] )—and a planar chip with fused silica substrate and superstrate—that this concept can enhance detection efficiency by at least a factor of 20. This is due to the long path of high pump intensity along the channel waveguide then with a length of 15 mm and due to the low reabsorption of the HRS light on its short way transversely out of the then 100 &#181;m broad channel—Here we extend this leaky waveguide approach by showing that the round cross-section wet-chemically etched into the fused silica substrate/superstrate can work as a dispersing lens at the waveguide bend. This lens and an external lens system are jointly optimized to improve optical input efficiency.</p></sec><sec id="s2"><title>2. Chip</title><sec id="s2_1"><title>2.1. Design</title><p>The complete planar CE-Chip is shown in <xref ref-type="fig" rid="fig2">Figure 2</xref> with a size comparison to a Euro cent coin (16 mm coin diameter). The optical path is marked by the arrows in <xref ref-type="fig" rid="fig2">Figure 2</xref>.</p></sec><sec id="s2_2"><title>2.2. Technology</title><p><xref ref-type="fig" rid="fig3">Figure 3</xref> gives an overview of the technological process to realize the chip by wet-etching both the substrate and the superstrate in the same way with mirror-inverted channel patterns. First both have to be thoroughly cleaned and prepared for photoresist wetting. Then both are spin-coated with the photoresist; different resist options are possible [<xref ref-type="bibr" rid="scirp.43709-ref17">17</xref>] [<xref ref-type="bibr" rid="scirp.43709-ref20">20</xref>] [<xref ref-type="bibr" rid="scirp.43709-ref21">21</xref>] . Then the latter is exposed to ultraviolet light in the pattern of the channel lay-out, developed, and hardbaked. The opening in the photoresist layer allows for wet-chemical etching of the substrate and superstrate by buffered hydrofluoric acid. The wet-etching causes half-round cross-sections (giving half-cylindrical channels). After photoresist descum in an oxygen plasma the fluid inlet holes have to be drilled or sand-blasted. Then suband superstrate are aligned and bonded by pressure and heat treatment with severe alignment tolerances of less than 1 &#181;m [<xref ref-type="bibr" rid="scirp.43709-ref22">22</xref>] . At the bottom of  <xref ref-type="fig" rid="fig3">Figure 3</xref> a microscope image of a channel crosssection after bonding of suband superstrate is shown; as intended no optical interface between both chip halves can be observed. (Note that in this case the chip has only been transversely sawed to make the microscope image of <xref ref-type="fig" rid="fig3">Figure 3</xref> possible.)</p></sec></sec><sec id="s3"><title>3. Longitudinal Optical Coupling—Channel Bend as Part of Input Lens System</title><p><xref ref-type="fig" rid="fig4">Figure 4</xref> is giving a combination of two microscope images and a sketch (not to scale), illustrating that the waveguide bend is part of the input-coupling lens system together with an external achromatic lens set-up—like in</p><p>the case of a Galilei-type telescope. (Note, that these microscope images show a slightly other chip version with an oblique feeding capillary as opposed to the case in <xref ref-type="fig" rid="fig2">Figure 2</xref>.) For the micrograph on the right in  <xref ref-type="fig" rid="fig4">Figure 4</xref> the capillary has been completely filled by the dye/chromophore Rhodamine 6G and illuminated/excited from outside with the light of an Ar<sup>+</sup> laser. The fluorescence extends over the whole straight channel, because the exciting beam is guided in this channel.</p><p>For a channel diameter of &#187;65 &#181;m and the optimized optical system, the results averaged over typical solvents (like water, methanol, and dioxane) and over the wavelengths of the visible spectrum, the waveguide insertion loss is about 2.0 dB for optical input (and output) coupling and about 0.07 dB/mm due to the leaky character of the optical waveguiding, i.e. f.e. 0.70 dB for a 10 mm long waveguide section, giving a loss of about 2.70 dB altogether [<xref ref-type="bibr" rid="scirp.43709-ref17">17</xref>] [<xref ref-type="bibr" rid="scirp.43709-ref22">22</xref>] .</p></sec><sec id="s4"><title>4. CE Fluorescence Detection</title><p>To show the potential of this approach exemplarily a capillary electrophoresis is run with a solution of TRIS(hy&#173;droxymethyl) aminomethane as the solvent and the chromophores Rhodamine B (R B) and Fluorescein 27 (F 27) as solutes with similar molecular backbones. The separation column is 92 mm long; the concentration of the solution is 14.2 &#181;mol. A voltage of 3.25 kV is applied along the separation channel, giving en electric field strength of 35 V/mm—The excitation of the dyes is again realized with the beam of an Ar<sup>+</sup> laser coupled into and waveguided in the optical channel, similar to the situation in  <xref ref-type="fig" rid="fig4">Figure 4</xref>, but now with the dyes as short plugs within the solvent electrophoretically formed and moving along the channel. Fluorescence detection is performed with the help of a glass fiber tip butt-coupled perpendicularly to the chip after an optical channel length of 5.0 mm and connected to a fiber-pig-tailed grating spectrometer with a spectral resolution of 1.2 nm.</p><p>The CE result is shown in <xref ref-type="fig" rid="fig5">Figure 5</xref>. Two fluorescence peaks demonstrate a temporal and spatial separation of the two markers Rhodamine and Fluorescein. The Rhodamine plug reaches the position of the fiber tip for detec&#173;tion first—after 85 s. The maximum of its fluorescence signal is at a wavelength of 566 nm. About 60 s later the Fluorescein plug reaches the detection fiber. Here the fluorescence maximum is at 547 nm.</p></sec><sec id="s5"><title>5. Conclusions</title><p>It is shown that leaky waveguiding can be used advantageously in on-chip capillary electrophoresis (chip-CE)</p><p>—exemplarily for the excitation light in fluorescence detection. Efficient input coupling can be achieved by incorporation of a wet-chemically etched waveguide bend. It acts as a dispersing lens and forms a Galilei-type telescope together with an external achromatic lens set-up.</p><p>In principle, the waveguiding concept can also be employed for other types of separation techniques and other methods of optical detection, like absorption spectroscopy. In the latter case f.e. the waveguided light can be coupled out of the channel again in the longitudinal direction with another Galilei-type micro telescope.</p></sec><sec id="s6"><title>Acknowledgements</title><p>The work was financially supported by the German Research Foundation (DFG, Deutsche Forschungsgemein&#173;schaft) under contract FO157/15.</p></sec></body><back><ref-list><title>References</title><ref id="scirp.43709-ref1"><label>1</label><mixed-citation publication-type="other" xlink:type="simple">Hewlett-Packard (Now Agilent Technologies) (1992) Product Specifications on Capillaries with Bubble Cell.</mixed-citation></ref><ref id="scirp.43709-ref2"><label>2</label><mixed-citation publication-type="journal" xlink:type="simple"><name name-style="western"><surname>Kaltenbach</surname><given-names> P. </given-names></name>,<etal>et al</etal>. 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