<?xml version="1.0" encoding="UTF-8"?><!DOCTYPE article  PUBLIC "-//NLM//DTD Journal Publishing DTD v3.0 20080202//EN" "http://dtd.nlm.nih.gov/publishing/3.0/journalpublishing3.dtd"><article xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink" dtd-version="3.0" xml:lang="en" article-type="research article"><front><journal-meta><journal-id journal-id-type="publisher-id">OJST</journal-id><journal-title-group><journal-title>Open Journal of Stomatology</journal-title></journal-title-group><issn pub-type="epub">2160-8709</issn><publisher><publisher-name>Scientific Research Publishing</publisher-name></publisher></journal-meta><article-meta><article-id pub-id-type="doi">10.4236/ojst.2021.117023</article-id><article-id pub-id-type="publisher-id">OJST-110765</article-id><article-categories><subj-group subj-group-type="heading"><subject>Articles</subject></subj-group><subj-group subj-group-type="Discipline-v2"><subject>Medicine&amp;Healthcare</subject></subj-group></article-categories><title-group><article-title>
 
 
  Malocclusion May Be Attributed to Variation among 10 Genes
 
</article-title></title-group><contrib-group><contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Piper</surname><given-names>Dizak</given-names></name><xref ref-type="aff" rid="aff1"><sup>1</sup></xref></contrib><contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>John</surname><given-names>Burnheimer</given-names></name><xref ref-type="aff" rid="aff2"><sup>2</sup></xref></contrib><contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Kathleen</surname><given-names>Deeley</given-names></name><xref ref-type="aff" rid="aff1"><sup>1</sup></xref></contrib><contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Alexandre</surname><given-names>R. Vieira</given-names></name><xref ref-type="aff" rid="aff1"><sup>1</sup></xref><xref ref-type="corresp" rid="cor1"><sup>*</sup></xref></contrib></contrib-group><aff id="aff2"><addr-line>Department of Orthodontics and Dentofacial Orthopedics, School of Dental Medicine, University of Pittsburgh, Pittsburgh, USA</addr-line></aff><aff id="aff1"><addr-line>Department of Oral Biology, School of Dental Medicine, University of Pittsburgh, Pittsburgh, USA</addr-line></aff><pub-date pub-type="epub"><day>13</day><month>07</month><year>2021</year></pub-date><volume>11</volume><issue>07</issue><fpage>263</fpage><lpage>269</lpage><history><date date-type="received"><day>22,</day>	<month>June</month>	<year>2021</year></date><date date-type="rev-recd"><day>20,</day>	<month>July</month>	<year>2021</year>	</date><date date-type="accepted"><day>23,</day>	<month>July</month>	<year>2021</year></date></history><permissions><copyright-statement>&#169; Copyright  2014 by authors and Scientific Research Publishing Inc. </copyright-statement><copyright-year>2014</copyright-year><license><license-p>This work is licensed under the Creative Commons Attribution International License (CC BY). http://creativecommons.org/licenses/by/4.0/</license-p></license></permissions><abstract><p>
 
 
  Introduction: The goal of this study was to utilize physical characteristics instead of placing subjects in arbitrary diagnostic categories to test for associations with genetic variants. 
  Methods: Forty-four single nucleotide polymorphisms were tested for association with specific cephalometric measurements in thirty-nine University of Pittsburgh Dental Registry and DNA Repository orthodontic subjects. Cephalometric measurements included an evaluation of FMA, a Wits appraisal, and a Steiner’s ANB analysis. Genetic markers were genotyped using polymerase chain reaction and Taqman chemistry. Chi-square and Fischer’s exact tests (α = 0.05) were used in investigation of overrepresentation of marker alleles. Samples were divided into groups based upon having an FMA, Wits, or ANB measurement above or below the mean of the cohort studied. Secondary analysis was done for sex and ethnicity to determine their effect on FMA, Wits, or ANB. 
  Results: An association between FMA measurements was discovered in the following genes: ACTN3, CASP4, ESR1, FGF13, KRT7, and PITX2. An association between Wits measurements was discovered in the following genes: ACTN2, BTBD11, CASP4, FGF3, and FGF10. No associations were found with ANB.
   Conclusions: Genetic markers in several genes at different loci may contribute to craniofacial deformities in humans. This approach of using physical measurements may be an advantage to placing patients in arbitrary diagnostic categories.
 
</p></abstract><kwd-group><kwd>Malocclusion</kwd><kwd> Multifactorial Inheritance</kwd><kwd> Genetic Association Studies</kwd><kwd> Linkage Disequilibrium</kwd><kwd> Genes</kwd></kwd-group></article-meta></front><body><sec id="s1"><title>1. Introduction</title><p>Craniofacial abnormalities erupting during postnatal growth and development are often a result of both genetic and environmental influences [<xref ref-type="bibr" rid="scirp.110765-ref1">1</xref>]. Some of the most common types include cleft lip and/or cleft palate, craniosynostosis, and hemifacial microsomia. It has been documented that there is a link between certain craniofacial abnormalities and genetics [<xref ref-type="bibr" rid="scirp.110765-ref2">2</xref>] [<xref ref-type="bibr" rid="scirp.110765-ref3">3</xref>].</p><p>Cephalometric analyses can be used to measure vertical and horizontal relationships of craniofacial development, with the degree of departure from normal corresponding to the severity of the abnormality [<xref ref-type="bibr" rid="scirp.110765-ref4">4</xref>]. Three common cephalometric analyses include an evaluation of FMA (Frankfort mandibular angle), a Wits appraisal, and a Steiner’s ANB analysis.</p><p>An FMA evaluation determines the skeletal vertical pattern of the patient, and is measured at the intersection of the Frankfort horizontal and mandibular plane [<xref ref-type="bibr" rid="scirp.110765-ref5">5</xref>]. FMA profiles include a normal vertical relationship at an angle of 25˚ &#177; 5˚, an open vertical pattern at an angle greater than 30˚, and a deep vertical relationship at an angle less than 20˚ [<xref ref-type="bibr" rid="scirp.110765-ref6">6</xref>].</p><p>A Wits appraisal measures the linear maxillary and mandibular disharmony in the anteroposterior direction along the functional occlusal plane (FOP) [<xref ref-type="bibr" rid="scirp.110765-ref7">7</xref>]. A perpendicular line is dropped from the most anterior point on the maxilla (PtA) and the most anterior point on the mandible (PtB) to the (FOP) and the difference is measured. Class I Wits values range from −1 &#177; 2 for males and 0 &#177; 2 for females. A Wits value less than −3 for males (−2 for a females) would indicate Class III, whereas a Wits value greater than +1 for males (+2 for females) would indicate Class II. Wits values differ depending on the sex of the patient. A limitation of this appraisal is that this measurement of jaw disharmony has no reference to external cranial morphology and is affected by the cant of the occlusal plane [<xref ref-type="bibr" rid="scirp.110765-ref7">7</xref>] [<xref ref-type="bibr" rid="scirp.110765-ref8">8</xref>].</p><p>In contrast to the linear measurement of Wits, the Steiner’s ANB analysis measures the angular discrepancy between the maxilla and the mandible [<xref ref-type="bibr" rid="scirp.110765-ref9">9</xref>]. This analysis measures the angle (ANB) between PtA and PtB registered at Nasion. Steiner’s ANB profiles include an ideal of 2˚ &#177; 2˚ angle indicating a class I skeletal relationship, angles greater than 4˚ indicating a class II skeletal relationship, and angles less than 0˚ indicating a class III skeletal relationship. Limitations of this analysis include the position of the nasion, jaw rotations, and facial height [<xref ref-type="bibr" rid="scirp.110765-ref10">10</xref>].</p><p>The goal of this study was to use cephalometric measurements to identify genetic variants associated with craniofacial deformities among orthodontic patients. Preliminary work has shown associations when combining three cephalometric analyses to define the phenotype [<xref ref-type="bibr" rid="scirp.110765-ref11">11</xref>]. We aim to find genetic associations with these assessments analyzed individually.</p></sec><sec id="s2"><title>2. Materials and Methods</title><p>The subjects in this study were patients treated in the Department of Orthodontics at the University of Pittsburgh School of Dental Medicine who had also volunteered to participate in the Dental Registry and DNA Repository project [<xref ref-type="bibr" rid="scirp.110765-ref12">12</xref>]. This project is approved by the University of Pittsburgh Institutional Review Board. All subjects provided written informed consent. Of the 95 patients that had been chosen for a previous study [<xref ref-type="bibr" rid="scirp.110765-ref11">11</xref>], 39 of those subjects were selected for this study. These subjects were chosen based upon their clinical and radiographic records and were included for having good quality images and measurements done and entered in the database. No individuals were excluded. The average age of participants was 17.8 years; 28 were female and 11 male; 20 were White, 13 were African American, two were Hispanic, and four were Asian. <xref ref-type="table" rid="table1">Table 1</xref> displays all information used in this study. We followed the STROBE guidelines.</p><p>The mean of the cohort studied was calculated for each of the three measurements (FMA, Wits, and Steiner’s), and subjects were placed into categories either above or below the mean for FMA, Wits, and Steiner’s measurements. Significance from the mean was an arbitrary guide in comparing the difference in distribution of genotypes. Those found to be significant were further analyzed based upon sex and ethnic background, which were independently conducted and used to determine if the true significance was driven by either of these variables.</p><p>Forty-four single nucleotide polymorphisms were chosen for each subject based upon genes of interest previously found to be linked to prognathism [<xref ref-type="bibr" rid="scirp.110765-ref11">11</xref>]. These genetic markers were tested using end-point analysis of polymerase chain reactions using Taqman chemistry [<xref ref-type="bibr" rid="scirp.110765-ref13">13</xref>]. Chi-square and Fischer’s exact tests (α = 0.05) were used in investigation of overrepresentation of marker alleles.</p></sec><sec id="s3"><title>3. Results</title><p>An association between FMA measurements and markers in the genes of ACTN3, CASP4, ESR1, FGF13, KRT7, and PITX2 was discovered (<xref ref-type="table" rid="table2">Table 2</xref>). Ethnicity was found to influence the associations with ESR1 and KRT7. Sex was not found to influence the association in any of the above genes.</p><p>An association between Wits measurements and markers in the genes of ACTN2, BTBD11, CASP4, FGF3, and FGF10 was discovered (<xref ref-type="table" rid="table2">Table 2</xref>). Ethnicity was found to influence the association with ACTN2. Sex was not found to influence the association in any of the above genes.</p><p>No associations with ANB measurements were detected.</p></sec><sec id="s4"><title>4. Discussion</title><p>In this study, 44 single nucleotide polymorphisms were selected to uncover a common genetic variation in horizontal and vertical malocclusion. Our study provides evidence that a number of genes were associated with hyperdivergent facial patterns, or contribute to sagittal maxillomandibular discrepancies.</p><p>Estrogen (ESR1) is a key hormone for maintaining bone mass, maturation and skeletal growth. One function of the increase in serum estrogen during puberty would be to decrease the activity of osteoclasts, while increasing osteoblastic activity, which supports the importance of estrogen for jaw mass and growth [<xref ref-type="bibr" rid="scirp.110765-ref14">14</xref>].</p><table-wrap id="table1" ><label><xref ref-type="table" rid="table1">Table 1</xref></label><caption><title> Summary of the subject’s measurements (n = 39) used in this study</title></caption><table><tbody><thead><tr><th align="center" valign="middle" ></th><th align="center" valign="middle" >Sex</th><th align="center" valign="middle" >Age (Years)</th><th align="center" valign="middle" >Ethnicity</th><th align="center" valign="middle" >FMA (˚)</th><th align="center" valign="middle" >Wits</th><th align="center" valign="middle" >ANB (˚)</th></tr></thead><tr><td align="center" valign="middle" >1</td><td align="center" valign="middle" >M</td><td align="center" valign="middle" >22</td><td align="center" valign="middle" >Asian</td><td align="center" valign="middle" >31.2</td><td align="center" valign="middle" >−6.6</td><td align="center" valign="middle" >0.3</td></tr><tr><td align="center" valign="middle" >2</td><td align="center" valign="middle" >M</td><td align="center" valign="middle" >17</td><td align="center" valign="middle" >White</td><td align="center" valign="middle" >22.2</td><td align="center" valign="middle" >−12</td><td align="center" valign="middle" >−8.1</td></tr><tr><td align="center" valign="middle" >3</td><td align="center" valign="middle" >F</td><td align="center" valign="middle" >23</td><td align="center" valign="middle" >White</td><td align="center" valign="middle" >24</td><td align="center" valign="middle" >−17.5</td><td align="center" valign="middle" >−10.1</td></tr><tr><td align="center" valign="middle" >4</td><td align="center" valign="middle" >F</td><td align="center" valign="middle" >19</td><td align="center" valign="middle" >African American</td><td align="center" valign="middle" >39.8</td><td align="center" valign="middle" >−6.4</td><td align="center" valign="middle" >3.4</td></tr><tr><td align="center" valign="middle" >5</td><td align="center" valign="middle" >F</td><td align="center" valign="middle" >21</td><td align="center" valign="middle" >African American</td><td align="center" valign="middle" >26.8</td><td align="center" valign="middle" >−4.5</td><td align="center" valign="middle" >−1.9</td></tr><tr><td align="center" valign="middle" >6</td><td align="center" valign="middle" >F</td><td align="center" valign="middle" >20</td><td align="center" valign="middle" >White</td><td align="center" valign="middle" >23.3</td><td align="center" valign="middle" >−6.8</td><td align="center" valign="middle" >−4.9</td></tr><tr><td align="center" valign="middle" >7</td><td align="center" valign="middle" >F</td><td align="center" valign="middle" >18</td><td align="center" valign="middle" >White</td><td align="center" valign="middle" >28.8</td><td align="center" valign="middle" >−6.5</td><td align="center" valign="middle" >−1.9</td></tr><tr><td align="center" valign="middle" >8</td><td align="center" valign="middle" >M</td><td align="center" valign="middle" >19</td><td align="center" valign="middle" >White</td><td align="center" valign="middle" >31.1</td><td align="center" valign="middle" >−7.3</td><td align="center" valign="middle" >−1.1</td></tr><tr><td align="center" valign="middle" >9</td><td align="center" valign="middle" >F</td><td align="center" valign="middle" >15</td><td align="center" valign="middle" >African American</td><td align="center" valign="middle" >19.3</td><td align="center" valign="middle" >−3.4</td><td align="center" valign="middle" >2.5</td></tr><tr><td align="center" valign="middle" >10</td><td align="center" valign="middle" >F</td><td align="center" valign="middle" >14</td><td align="center" valign="middle" >Hispanic</td><td align="center" valign="middle" >31.6</td><td align="center" valign="middle" >−6.2</td><td align="center" valign="middle" >−2.7</td></tr><tr><td align="center" valign="middle" >11</td><td align="center" valign="middle" >F</td><td align="center" valign="middle" >22</td><td align="center" valign="middle" >White</td><td align="center" valign="middle" >22.6</td><td align="center" valign="middle" >−15.7</td><td align="center" valign="middle" >−6.6</td></tr><tr><td align="center" valign="middle" >12</td><td align="center" valign="middle" >F</td><td align="center" valign="middle" >12</td><td align="center" valign="middle" >Asian</td><td align="center" valign="middle" >28.8</td><td align="center" valign="middle" >−5</td><td align="center" valign="middle" >−2.3</td></tr><tr><td align="center" valign="middle" >13</td><td align="center" valign="middle" >F</td><td align="center" valign="middle" >20</td><td align="center" valign="middle" >White</td><td align="center" valign="middle" >26.9</td><td align="center" valign="middle" >−7.6</td><td align="center" valign="middle" >0.7</td></tr><tr><td align="center" valign="middle" >14</td><td align="center" valign="middle" >M</td><td align="center" valign="middle" >15</td><td align="center" valign="middle" >White</td><td align="center" valign="middle" >18.3</td><td align="center" valign="middle" >−1.3</td><td align="center" valign="middle" >0.3</td></tr><tr><td align="center" valign="middle" >15</td><td align="center" valign="middle" >F</td><td align="center" valign="middle" >12</td><td align="center" valign="middle" >Hispanic</td><td align="center" valign="middle" >28.2</td><td align="center" valign="middle" >−8.1</td><td align="center" valign="middle" >0.6</td></tr><tr><td align="center" valign="middle" >16</td><td align="center" valign="middle" >F</td><td align="center" valign="middle" >15</td><td align="center" valign="middle" >White</td><td align="center" valign="middle" >23.1</td><td align="center" valign="middle" >−13.3</td><td align="center" valign="middle" >−7.5</td></tr><tr><td align="center" valign="middle" >17</td><td align="center" valign="middle" >F</td><td align="center" valign="middle" >18</td><td align="center" valign="middle" >White</td><td align="center" valign="middle" >33</td><td align="center" valign="middle" >−10.6</td><td align="center" valign="middle" >−4.7</td></tr><tr><td align="center" valign="middle" >18</td><td align="center" valign="middle" >M</td><td align="center" valign="middle" >18</td><td align="center" valign="middle" >White</td><td align="center" valign="middle" >23.4</td><td align="center" valign="middle" >−7</td><td align="center" valign="middle" >−1.9</td></tr><tr><td align="center" valign="middle" >19</td><td align="center" valign="middle" >F</td><td align="center" valign="middle" >11</td><td align="center" valign="middle" >African American</td><td align="center" valign="middle" >34.6</td><td align="center" valign="middle" >−8.8</td><td align="center" valign="middle" >2.3</td></tr><tr><td align="center" valign="middle" >20</td><td align="center" valign="middle" >M</td><td align="center" valign="middle" >11</td><td align="center" valign="middle" >White</td><td align="center" valign="middle" >19.3</td><td align="center" valign="middle" >−7.8</td><td align="center" valign="middle" >−4.4</td></tr><tr><td align="center" valign="middle" >21</td><td align="center" valign="middle" >F</td><td align="center" valign="middle" >16</td><td align="center" valign="middle" >African American</td><td align="center" valign="middle" >25.3</td><td align="center" valign="middle" >−5</td><td align="center" valign="middle" >−0.9</td></tr><tr><td align="center" valign="middle" >22</td><td align="center" valign="middle" >F</td><td align="center" valign="middle" >15</td><td align="center" valign="middle" >White</td><td align="center" valign="middle" >20.6</td><td align="center" valign="middle" >−4.6</td><td align="center" valign="middle" >−0.7</td></tr><tr><td align="center" valign="middle" >23</td><td align="center" valign="middle" >F</td><td align="center" valign="middle" >18</td><td align="center" valign="middle" >White</td><td align="center" valign="middle" >22.5</td><td align="center" valign="middle" >−4.4</td><td align="center" valign="middle" >−2.9</td></tr><tr><td align="center" valign="middle" >24</td><td align="center" valign="middle" >F</td><td align="center" valign="middle" >28</td><td align="center" valign="middle" >African American</td><td align="center" valign="middle" >20.8</td><td align="center" valign="middle" >−5.9</td><td align="center" valign="middle" >−1.0</td></tr><tr><td align="center" valign="middle" >25</td><td align="center" valign="middle" >F</td><td align="center" valign="middle" >13</td><td align="center" valign="middle" >White</td><td align="center" valign="middle" >20.9</td><td align="center" valign="middle" >−5.4</td><td align="center" valign="middle" >−0.9</td></tr><tr><td align="center" valign="middle" >26</td><td align="center" valign="middle" >F</td><td align="center" valign="middle" >23</td><td align="center" valign="middle" >African American</td><td align="center" valign="middle" >22.6</td><td align="center" valign="middle" >−8.4</td><td align="center" valign="middle" >−1.2</td></tr><tr><td align="center" valign="middle" >27</td><td align="center" valign="middle" >F</td><td align="center" valign="middle" >14</td><td align="center" valign="middle" >White</td><td align="center" valign="middle" >30.1</td><td align="center" valign="middle" >−4.7</td><td align="center" valign="middle" >−0.3</td></tr><tr><td align="center" valign="middle" >28</td><td align="center" valign="middle" >M</td><td align="center" valign="middle" >24</td><td align="center" valign="middle" >Asian</td><td align="center" valign="middle" >34.7</td><td align="center" valign="middle" >−4.1</td><td align="center" valign="middle" >−3.4</td></tr><tr><td align="center" valign="middle" >29</td><td align="center" valign="middle" >F</td><td align="center" valign="middle" >18</td><td align="center" valign="middle" >African American</td><td align="center" valign="middle" >23.7</td><td align="center" valign="middle" >−10</td><td align="center" valign="middle" >−6</td></tr><tr><td align="center" valign="middle" >30</td><td align="center" valign="middle" >M</td><td align="center" valign="middle" >19</td><td align="center" valign="middle" >White</td><td align="center" valign="middle" >33.2</td><td align="center" valign="middle" >−7.8</td><td align="center" valign="middle" >−1.4</td></tr><tr><td align="center" valign="middle" >31</td><td align="center" valign="middle" >F</td><td align="center" valign="middle" >15</td><td align="center" valign="middle" >African American</td><td align="center" valign="middle" >17.6</td><td align="center" valign="middle" >−6.4</td><td align="center" valign="middle" >0.2</td></tr><tr><td align="center" valign="middle" >32</td><td align="center" valign="middle" >M</td><td align="center" valign="middle" >12</td><td align="center" valign="middle" >African American</td><td align="center" valign="middle" >21.5</td><td align="center" valign="middle" >−8.2</td><td align="center" valign="middle" >−3.8</td></tr><tr><td align="center" valign="middle" >33</td><td align="center" valign="middle" >F</td><td align="center" valign="middle" >21</td><td align="center" valign="middle" >African American</td><td align="center" valign="middle" >23.3</td><td align="center" valign="middle" >−4.3</td><td align="center" valign="middle" >−4.8</td></tr><tr><td align="center" valign="middle" >34</td><td align="center" valign="middle" >F</td><td align="center" valign="middle" >15</td><td align="center" valign="middle" >White</td><td align="center" valign="middle" >32.7</td><td align="center" valign="middle" >−10.7</td><td align="center" valign="middle" >−2.7</td></tr><tr><td align="center" valign="middle" >35</td><td align="center" valign="middle" >M</td><td align="center" valign="middle" >28</td><td align="center" valign="middle" >White</td><td align="center" valign="middle" >22</td><td align="center" valign="middle" >−8.3</td><td align="center" valign="middle" >−1.9</td></tr><tr><td align="center" valign="middle" >36</td><td align="center" valign="middle" >F</td><td align="center" valign="middle" >13</td><td align="center" valign="middle" >African American</td><td align="center" valign="middle" >18.5</td><td align="center" valign="middle" >−12.8</td><td align="center" valign="middle" >−4.1</td></tr><tr><td align="center" valign="middle" >37</td><td align="center" valign="middle" >F</td><td align="center" valign="middle" >13</td><td align="center" valign="middle" >African American</td><td align="center" valign="middle" >25.3</td><td align="center" valign="middle" >−12.2</td><td align="center" valign="middle" >−5.3</td></tr><tr><td align="center" valign="middle" >38</td><td align="center" valign="middle" >F</td><td align="center" valign="middle" >24</td><td align="center" valign="middle" >White</td><td align="center" valign="middle" >22.3</td><td align="center" valign="middle" >−3.5</td><td align="center" valign="middle" >−1.4</td></tr><tr><td align="center" valign="middle" >39</td><td align="center" valign="middle" >M</td><td align="center" valign="middle" >24</td><td align="center" valign="middle" >Asian</td><td align="center" valign="middle" >14.9</td><td align="center" valign="middle" >−4.2</td><td align="center" valign="middle" >−3.6</td></tr><tr><td align="center" valign="middle" >Mean</td><td align="center" valign="middle" >-</td><td align="center" valign="middle" >17.82</td><td align="center" valign="middle" >-</td><td align="center" valign="middle" >25.35</td><td align="center" valign="middle" >−7.52</td><td align="center" valign="middle" >−2.41</td></tr></tbody></table></table-wrap><table-wrap id="table2" ><label><xref ref-type="table" rid="table2">Table 2</xref></label><caption><title> Summary of the association results</title></caption><table><tbody><thead><tr><th align="center" valign="middle" >Gene</th><th align="center" valign="middle" >Marker</th><th align="center" valign="middle" >Test</th><th align="center" valign="middle" >Associated Allele/Genotype</th><th align="center" valign="middle" >p-value</th><th align="center" valign="middle" >Trait</th></tr></thead><tr><td align="center" valign="middle" >ACTN3</td><td align="center" valign="middle" >rs1671064</td><td align="center" valign="middle" >FMA</td><td align="center" valign="middle" >G vs. A</td><td align="center" valign="middle" >0.003</td><td align="center" valign="middle" >G associated with tendency to have a higher-angle FMA, A associated with tendency to have a lower-angle FMA</td></tr><tr><td align="center" valign="middle" >CASP4</td><td align="center" valign="middle" >rs571407</td><td align="center" valign="middle" >FMA</td><td align="center" valign="middle" >T vs. C</td><td align="center" valign="middle" >0.04</td><td align="center" valign="middle" >T associated with tendency to have a higher-angle FMA, C associated with tendency to have a lower-angle FMA</td></tr><tr><td align="center" valign="middle" >ESR1</td><td align="center" valign="middle" >rs2077647</td><td align="center" valign="middle" >FMA</td><td align="center" valign="middle" >CC vs. TT</td><td align="center" valign="middle" >0.03</td><td align="center" valign="middle" >CC associated with tendency to have a higher-angle FMA, TT associated with tendency to have a lower-angle FMA</td></tr><tr><td align="center" valign="middle" >FGF13</td><td align="center" valign="middle" >rs489895</td><td align="center" valign="middle" >FMA</td><td align="center" valign="middle" >CT vs. TT</td><td align="center" valign="middle" >0.03</td><td align="center" valign="middle" >Having at least one copy of C associated with tendency to have a higher-angle FMA, TT associated with tendency to have a lower-angle FMA</td></tr><tr><td align="center" valign="middle" >FGF13</td><td align="center" valign="middle" >rs489895</td><td align="center" valign="middle" >FMA</td><td align="center" valign="middle" >C vs. T</td><td align="center" valign="middle" >0.04</td><td align="center" valign="middle" >C associated with tendency to have a higher-angle FMA, T associated with tendency to have a lower-angle FMA</td></tr><tr><td align="center" valign="middle" >KRT7</td><td align="center" valign="middle" >rs7300317</td><td align="center" valign="middle" >FMA</td><td align="center" valign="middle" >A vs. G</td><td align="center" valign="middle" >0.05</td><td align="center" valign="middle" >A associated with tendency to have a higher-angle FMA, G associated with tendency to have a lower-angle FMA</td></tr><tr><td align="center" valign="middle" >PITX2</td><td align="center" valign="middle" >rs2595110</td><td align="center" valign="middle" >FMA</td><td align="center" valign="middle" >A vs. G</td><td align="center" valign="middle" >0.04</td><td align="center" valign="middle" >A associated with tendency to have a higher-angle FMA, G associated with tendency to have a lower-angle FMA</td></tr><tr><td align="center" valign="middle" >ACTN2</td><td align="center" valign="middle" >rs4659704</td><td align="center" valign="middle" >Wits</td><td align="center" valign="middle" >CC vs. AC</td><td align="center" valign="middle" >0.04</td><td align="center" valign="middle" >CC associated with tendency to have a less negative Wits value, having at least one copy of A associated with tendency to have a more negative Wits value</td></tr><tr><td align="center" valign="middle" >BTBD11</td><td align="center" valign="middle" >rs11113231</td><td align="center" valign="middle" >Wits</td><td align="center" valign="middle" >GG vs. AA</td><td align="center" valign="middle" >0.03</td><td align="center" valign="middle" >GG associated with tendency to have a less negative Wits value, AA associated with tendency to have a more negative Wits value</td></tr><tr><td align="center" valign="middle" >CASP4</td><td align="center" valign="middle" >rs571407</td><td align="center" valign="middle" >Wits</td><td align="center" valign="middle" >T vs. C</td><td align="center" valign="middle" >0.04</td><td align="center" valign="middle" >T associated with tendency to have a less negative Wits value, C associated with tendency to have a more negative Wits value</td></tr><tr><td align="center" valign="middle" >FGF3</td><td align="center" valign="middle" >rs1893047</td><td align="center" valign="middle" >Wits</td><td align="center" valign="middle" >AA vs. GG</td><td align="center" valign="middle" >0.04</td><td align="center" valign="middle" >AA associated with tendency to have a less negative Wits value, GG associated with tendency to have a more negative Wits value</td></tr><tr><td align="center" valign="middle" >FGF3</td><td align="center" valign="middle" >rs1893047</td><td align="center" valign="middle" >Wits</td><td align="center" valign="middle" >A vs. G</td><td align="center" valign="middle" >0.02</td><td align="center" valign="middle" >A associated with tendency to have a less negative Wits value, G associated with tendency to have a more negative Wits value</td></tr><tr><td align="center" valign="middle" >FGF10</td><td align="center" valign="middle" >rs1448037</td><td align="center" valign="middle" >Wits</td><td align="center" valign="middle" >T vs. C</td><td align="center" valign="middle" >0.004</td><td align="center" valign="middle" >T associated with tendency to have a less negative Wits value, C associated with tendency to have a more negative Wits value</td></tr></tbody></table></table-wrap><p>Notes: Higher FMA angles (greater than 30˚) correlate to open-bite skeletal patterns, while lower FMA angles (fewer than 20˚) correlate to deep-bite skeletal patterns. Less negative Wits values correlate to mandibular retrognatism, while more negative Wits values correlate to mandibular prognatism. Larger ANB angles (greater than 2˚) correlate to the mandible being located behind the maxilla, while smaller ANB angles (fewer than 2˚) correlate to the mandible being located ahead of the maxilla.</p><p>This would be compatible with the functional matrix theory of Moss, where growth and the fundamental matrix are linked.</p><p>KRT7 encodes a protein which is a member of the keratin gene family. This protein is a type II cytokeratins consisting of basic or neutral proteins, arranged in pairs of heterotypic chains, coexpressed during differentiation of simple and stratified epithelial tissues. This type II cytokeratin is specifically expressed in the simple epithelia lining the cavities of the internal organs and in the gland ducts and blood vessels. KRT7 is clustered in a region of chromosome 12q12-q13. Its role in vertical jaw discrepancy remains unclear [<xref ref-type="bibr" rid="scirp.110765-ref15">15</xref>]. Similarly, the role of CASP4, FGF13, PITX2, BTBD11, FGF3, and FGF10 in post-natal craniofacial growth are not known.</p><p>ACTN2, located on the long arm of chromosome 1, is expressed in both slow type 1 and fast type 2 fibers. In skeletal muscle, alpha-Actinin-2 crosslinks actin filaments. ACTN2 expression remains relatively constant irrespective of the changes in the ACTN3 genotype. However, ACTN3 R577X was associated with Class II and deepbite malocclusions [<xref ref-type="bibr" rid="scirp.110765-ref16">16</xref>]. As alpha-Actinin-2 and -3 are closely related isoforms, a compensatory effect may have occurred.</p><p>The small sample size of our study can be suggested as a limitation, however the exercise of characterizing the sample carefully aims to decrease heterogeneity and allow for more statistical power. Still, the associations reported here should be interpreted with caution and ideally independently replicated in other cohorts. Future studies will aim to predict postnatal craniofacial patterns and treatment outcomes from genomic profiles.</p></sec><sec id="s5"><title>5. Conclusion</title><p>ACTN3, CASP4, ESR1, FGF13, KRT7, and PITX2 were associated with hyperdivergent skeletal pattern. ACTN2, BTBD11, CASP4, FGF3, and FGF10 were associated with sagittal maxillomandibular discrepancies. FGF10 and GHR were associated with ANB.</p></sec><sec id="s6"><title>Conflicts of Interest</title><p>The authors declare no conflicts of interest regarding the publication of this paper.</p></sec><sec id="s7"><title>Cite this paper</title><p>Dizak, P., Burnheimer, J., Deeley, K. and Vieira, A.R. (2021) Malocclusion May Be Attributed to Variation among 10 Genes. 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