<?xml version="1.0" encoding="UTF-8"?><!DOCTYPE article  PUBLIC "-//NLM//DTD Journal Publishing DTD v3.0 20080202//EN" "http://dtd.nlm.nih.gov/publishing/3.0/journalpublishing3.dtd"><article xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink" dtd-version="3.0" xml:lang="en" article-type="research article"><front><journal-meta><journal-id journal-id-type="publisher-id">OJAS</journal-id><journal-title-group><journal-title>Open Journal of Animal Sciences</journal-title></journal-title-group><issn pub-type="epub">2161-7597</issn><publisher><publisher-name>Scientific Research Publishing</publisher-name></publisher></journal-meta><article-meta><article-id pub-id-type="doi">10.4236/ojas.2021.111005</article-id><article-id pub-id-type="publisher-id">OJAS-106838</article-id><article-categories><subj-group subj-group-type="heading"><subject>Articles</subject></subj-group><subj-group subj-group-type="Discipline-v2"><subject>Biomedical&amp;Life Sciences</subject></subj-group></article-categories><title-group><article-title>
 
 
  Factors Associated with Increased Walleye Production in Lined Compared to Earthen-Substrate Ponds
 
</article-title></title-group><contrib-group><contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Matthew</surname><given-names>J. Ward</given-names></name><xref ref-type="aff" rid="aff1"><sup>1</sup></xref><xref ref-type="corresp" rid="cor1"><sup>*</sup></xref></contrib><contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Brian</surname><given-names>G. Blackwell</given-names></name><xref ref-type="aff" rid="aff2"><sup>2</sup></xref></contrib></contrib-group><aff id="aff1"><addr-line>South Dakota Department of Game, Fish and Parks, Blue Dog State Fish Hatchery, Waubay, USA</addr-line></aff><aff id="aff2"><addr-line>South Dakota Department of Game, Fish and Parks, District Office, Webster, USA</addr-line></aff><pub-date pub-type="epub"><day>26</day><month>01</month><year>2021</year></pub-date><volume>11</volume><issue>01</issue><fpage>50</fpage><lpage>61</lpage><history><date date-type="received"><day>3,</day>	<month>December</month>	<year>2020</year></date><date date-type="rev-recd"><day>25,</day>	<month>January</month>	<year>2021</year>	</date><date date-type="accepted"><day>28,</day>	<month>January</month>	<year>2021</year></date></history><permissions><copyright-statement>&#169; Copyright  2014 by authors and Scientific Research Publishing Inc. </copyright-statement><copyright-year>2014</copyright-year><license><license-p>This work is licensed under the Creative Commons Attribution International License (CC BY). http://creativecommons.org/licenses/by/4.0/</license-p></license></permissions><abstract><p>
 
 
  Walleye (
  Sander vitreus
  ) fingerling production can be enhanced when the pond substrate is altered from earthen soils to an exposed liner; however, few differences in water chemistry, prey densities, and food habits have been identified that could potentially explain this production difference. Lack of an explanation led to further comparison of walleye fingerling culture between substrate types during 2016. Two ponds of each type were stocked with 1
  -
   to 3-day
  -
  old walleye fry, but lined ponds received an additional 104,166 fry/ha and were stocked 1 or 2 days later than earthen ponds (May 10). Walleyes in lined ponds achieved a growth advantage on May 31 (+2.5 mm) and on June 6 (+3.3 mm), but lengths were not significantly different at harvest (June 15). Lined ponds increased walleye yield and number 1.8-fold while not reducing individual fish size at harvest compared to earthen ponds. Walleye food habits were generally similar between pond types with a greater 
  number
   of
   zooplankton being consumed through June 6 followed by an increase in larval chironomid consumption at harvest (June 15). After May 30, lined ponds exhibited lower dissolved oxygen and higher ammonia-nitrogen concentrations even though earthen ponds received additional (157 kg/ha) alfalfa (Medicago sativa
  ) meal fertilizer. Also, at this time pH declined abruptly and remained below 8.2 in lined ponds. Moreover, the enhanced production in lined ponds coincided with walleyes that exhibited an increased pelagic (
  δ
  <sup>13</sup>C) signature during the culture period (2
  ‰
   to 3.3
  ‰ 
  more negative). Efforts to improve production in earthen-substrate ponds should focus on increasing the pelagic signature of the food web through fertilization strategies which increase ammonia-nitrogen (≈0.3 mg/L) and decrease dissolved oxygen (≈6.5 mg/L) while maintaining a pH between 8.0 and 8.2 during the second half of the rearing interval.
 
</p></abstract><kwd-group><kwd>Walleye</kwd><kwd> Fingerling Culture</kwd><kwd> Pond-Substrate Type</kwd></kwd-group></article-meta></front><body><sec id="s1"><title>1. Introduction</title><p>In drainable ponds fertilized with alfalfa (Medicago sativa), walleye (Sander vitreus) fingerling production can be enhanced when the pond substrate is altered from earthen soils to an exposed ethylene propylene diene monomer liner (hereafter lined pond [<xref ref-type="bibr" rid="scirp.106838-ref1">1</xref>] ). This increased production advantage in lined ponds has been consistent in several trials. Doubling the stocking density in lined ponds coincided with producing three times the number of walleyes that averaged an additional 5 mm in length compared to those reared in earthen-substrate ponds [<xref ref-type="bibr" rid="scirp.106838-ref2">2</xref>]. However, few differences have been observed in water chemistry, prey densities, or walleye food habits between lined and earthen ponds [<xref ref-type="bibr" rid="scirp.106838-ref1">1</xref>]. This lack of information has provided little direction for potentially improving walleye production in earthen ponds other than adding an expensive liner.</p><p>Walleye larvae (2- to 3-d-old) stocked into hatchery ponds initially consume zooplankton followed by a transition to benthic invertebrates regardless of pond type [<xref ref-type="bibr" rid="scirp.106838-ref3">3</xref>] [<xref ref-type="bibr" rid="scirp.106838-ref4">4</xref>] [<xref ref-type="bibr" rid="scirp.106838-ref5">5</xref>]. A food web with both pelagic and benthic aspects is desirable as each can contribute to increased production [<xref ref-type="bibr" rid="scirp.106838-ref6">6</xref>] [<xref ref-type="bibr" rid="scirp.106838-ref7">7</xref>] [<xref ref-type="bibr" rid="scirp.106838-ref8">8</xref>]. Developing a food web with these complexities can be achieved by fertilizing with alfalfa because it serves as an immediate food source for zooplankton [<xref ref-type="bibr" rid="scirp.106838-ref9">9</xref>], provides organic matter for benthic invertebrates [<xref ref-type="bibr" rid="scirp.106838-ref10">10</xref>], and releases nutrients that sustain phytoplankton which also support zooplankton production [<xref ref-type="bibr" rid="scirp.106838-ref11">11</xref>] [<xref ref-type="bibr" rid="scirp.106838-ref12">12</xref>]. Walleye growth and production differences observed between pond substrate types suggest that alfalfa promotes a superior food web to develop in lined ponds, but the mechanism responsible for this is not understood [<xref ref-type="bibr" rid="scirp.106838-ref1">1</xref>]. Quantifying the δ<sup>13</sup>C signature of the walleyes reared in both pond types will reflect energy flow from benthic and pelagic sources [<xref ref-type="bibr" rid="scirp.106838-ref13">13</xref>] and assist with understanding the production differences between pond substrate types.</p><p>While the decomposition of alfalfa enhances the pond prey base, it will also affect water chemistry. Reduced dissolved oxygen concentrations [<xref ref-type="bibr" rid="scirp.106838-ref5">5</xref>] [<xref ref-type="bibr" rid="scirp.106838-ref14">14</xref>] [<xref ref-type="bibr" rid="scirp.106838-ref15">15</xref>] and pH [<xref ref-type="bibr" rid="scirp.106838-ref5">5</xref>] combined with ammonia releases [<xref ref-type="bibr" rid="scirp.106838-ref16">16</xref>] are characteristic of alfalfa fertilization. Understanding how these variables change during the culture interval is not only crucial for fish survival [<xref ref-type="bibr" rid="scirp.106838-ref14">14</xref>] [<xref ref-type="bibr" rid="scirp.106838-ref17">17</xref>], but also provides insight into important biological processes (e.g., decomposition, photosynthesis) that may affect production.</p><p>Our objective is to potentially identify factors that coincide with the increased fingerling walleye production in lined ponds and provide information that can be used to improve production in earthen ponds without having to line them. Specifically, we compare fingerling walleye performance (i.e., production, size, number), δ<sup>13</sup>C signatures and food habits, and water chemistry variables between lined and earthen ponds.</p></sec><sec id="s2"><title>2. Methods</title><sec id="s2_1"><title>2.1. Pond Culture</title><p>Four drainable ponds (0.72 ha) located at Blue Dog State Fish Hatchery (Waubay, South Dakota, 45˚21'30.89''N, 97˚19'03.63''W) were used in this study. Two ponds of each substrate type were filled with unfiltered water from Blue Dog Lake (eutrophic, [<xref ref-type="bibr" rid="scirp.106838-ref18">18</xref>] ) and initially fertilized during May 9-11, 2016. Initial fertilization in all ponds consisted of 227 kg of alfalfa meal (17% protein, Green Meadows Forage, Gayville, South Dakota, USA) and 23 kg of yeast (15% protein, Dakota Yeast, LLC, Wahpeton, North Dakota, USA). After 10 days, all ponds received another 113 kg of alfalfa meal. No further fertilization occurred in the lined ponds while the earthen ponds received an additional 113 kg of alfalfa meal after 20 days. More alfalfa meal was used in earthen ponds because they tend to maintain higher dissolved oxygen concentrations than lined ponds (unpublished data from Blue Dog State Fish Hatchery). Evaporation caused water levels to decrease in all ponds over the culture period, so lake water was added as needed to keep ponds full. Lined ponds were stocked with 225,000 walleye fry on May 11 or 12, 2016, while earthen ponds were stocked with 150,000 walleye fry on May 10, 2016. Higher stocking densities were used in lined ponds to maximize number of fingerlings produced without sacrificing fish size compared to earthen ponds [<xref ref-type="bibr" rid="scirp.106838-ref2">2</xref>]. We enumerated 1- to 3-day-old walleye fry by volumetric displacement and a constant of 220 fry per ml.</p></sec><sec id="s2_2"><title>2.2. Water Chemistry Parameters</title><p>Water temperature (degrees Celsius) was measured near the substrate by the drain structure of one pond of each type every hour using a deployable TidbiT v2 Temp Logger (Onset Computer Corporation, Bourne, Massachusetts, USA) from 12:00 p.m. on May 13 through 12:00 p.m. on June 13, 2016. Ammonia-nitrogen (mg/L, salicylate method, Hach DR2010 Spectrophotometer, Loveland, Colorado, USA), pH (Oakton pH 150 meter with electrode, Oakton Instruments, Vernon Hills, Illinois, USA), and dissolved oxygen (Oakton PD 450 meter with RDO probe and sensor cap, Oakton Instruments, Vernon Hills, Illinois, USA) were measured seven times at intervals of 3 to 7 days beginning on May 12 and ending on June 10, 2016 at the drain structure of each pond. Ammonia-nitrogen was determined from a 1-L water sample collected 0.15 m beneath the surface, while pH and dissolved oxygen were measured with their respective probes at a depth of 0.10 m (pH) and 1.00 m (dissolved oxygen). All measurements were made in the morning beginning at 9:00 a.m.</p></sec><sec id="s2_3"><title>2.3. Walleye Sampling</title><p>From each pond, 20 walleyes were collected by seining (3.2-mm diameter mesh) on both May 31 and June 6, 2016, and 50 walleyes were collected from the catch basin during pond harvest (June 14-16, 2016). All of these walleyes were initially preserved in a 10% formalin solution for at least 1 hour and then measured for total length (mm) and transferred to 95% ethanol until food habits were quantified. The number of zooplankton and larval chironomids present were determined from digestive tracts of 10 walleyes per pond for each sampling date. Additional unpreserved walleyes collected on May 31 (30 per pond) and at pond harvest (10 per pond) were frozen in pond water. These walleyes were dried at 60˚C for 72 hours and ground into a fine powder before being shipped to Coil Laboratory (Cornell University, Ithaca, New York) for δ<sup>13</sup>C determination.</p></sec><sec id="s2_4"><title>2.4. Pond Harvest</title><p>A pond of each treatment was harvested on June 14 and 16, 2016. This resulted in an average rearing interval of 35 days for lined ponds and 36 days for earthen ponds. For each pond, a known number of walleyes (≥150) was randomly removed from the catch basin and cumulatively weighed. The number of walleyes was divided by the cumulative weight to determine the number of walleyes per kg. The total kg of walleyes harvested from each pond was determined by weighing nets filled with walleyes to the nearest 0.22 kg. For each pond, the total kg of walleyes harvested was multiplied by the number of fish per kg to estimate the number harvested from each pond.</p></sec><sec id="s2_5"><title>2.5. Calculations and Statistics</title><p>Mean daily temperatures were calculated for the time period of May 14 through June 12, 2016 for each pond type, but no measure of variation was used because temperature was only measured in one pond of each type. Mean daily temperatures were summed for both pond types to compare total temperature units accumulated during that timeframe. Means and standard errors were used to describe all walleye performance metrics, food habits and δ<sup>13</sup>C signatures, as well as the patterns in ammonia-nitrogen, dissolved oxygen, and pH. Small sample sizes lack power to test for normality, so a one-way analysis of variance (ANOVA) was used to compare between treatments because only very skewed distributions have a marked effect on the significance level of the F-test [<xref ref-type="bibr" rid="scirp.106838-ref19">19</xref>]. Water chemistry data (ammonia-nitrogen, dissolved oxygen, and pH) were compared between and within treatments. Treatment comparisons were made after data were grouped into two timeframes (before and after May 30, 2016) to account for not sampling these variables on the same day for each treatment. Four sampling events occurred during the earlier period and three sampling events occurred during the later period for both treatments. Within treatments, water chemistry variables were compared over time across the seven sampling dates. Pairwise comparisons between dates were made using Tukey’s-honestly significant difference test. Significance was set at 0.05 for all comparisons.</p></sec></sec><sec id="s3"><title>3. Results</title><sec id="s3_1"><title>3.1. Walleye Growth and Harvest Metrics</title><p>Walleyes in lined ponds were on average 2.5 mm longer on May 31 (F-ratio = 289.000, df = 1, 2, P = 0.003) and 3.3 mm longer on June 6 (F-ratio = 19.603, df = 1, 2, P = 0.047) than those in earthen ponds (<xref ref-type="fig" rid="fig1">Figure 1</xref>). At the time of harvest, walleye size was similar between pond types (F-ratio = 0.090, df = 1, 2, P = 0.793; <xref ref-type="fig" rid="fig1">Figure 1</xref>), while average yield (F-ratio = 35.373, df = 1, 2, P = 0.027) and number harvested (F-ratio = 25.409, df = 1, 2, P = 0.027) were significantly higher in lined ponds (<xref ref-type="table" rid="table1">Table 1</xref>). Specifically, the lined treatment produced an average increase of 78,585 walleyes and 23.1 kg of biomass without reducing fish size at harvest (<xref ref-type="table" rid="table1">Table 1</xref>; <xref ref-type="fig" rid="fig1">Figure 1</xref>).</p><table-wrap id="table1" ><label><xref ref-type="table" rid="table1">Table 1</xref></label><caption><title> Mean (&#177;SE) number, yield (total kg), and size (walleyes per kg) of walleye harvested from two lined and two earthen ponds (0.72-ha) at Blue Dog State Fish Hatchery, South Dakota with one pond of each treatment being harvested on June 14 and 16, 2016. Walleye were reared for an average of 35 days in the lined and 36 days in the earthen treatment. Lined ponds were stocked with 225,000 fry, while earthen ponds were stocked with 150,000 fry</title></caption><table><tbody><thead><tr><th align="center" valign="middle" >Treatment</th><th align="center" valign="middle" >Number Harvested</th><th align="center" valign="middle" >Yield (kg)</th><th align="center" valign="middle" >Size (walleyes/kg)</th></tr></thead><tr><td align="center" valign="middle" >Lined</td><td align="center" valign="middle" >180,015 &#177; 13,965<sup>y</sup></td><td align="center" valign="middle" >52.1 &#177; 3.9<sup>y</sup></td><td align="center" valign="middle" >3498 &#177; 528</td></tr><tr><td align="center" valign="middle" >Earthen</td><td align="center" valign="middle" >101,430 &#177; 6930<sup>z</sup></td><td align="center" valign="middle" >29.0 &#177; 0.4<sup>z</sup></td><td align="center" valign="middle" >3498 &#177; 198</td></tr></tbody></table></table-wrap><p>Differing superscripts within a column indicate a significant difference between treatments (P ≤ 0.05).</p></sec><sec id="s3_2"><title>3.2. Walleye Food Habits and δ<sup>13</sup>C Signatures</title><p>The numbers of zooplankton and chironomids within walleye digestive tracts were not significantly different between pond types (all three comparisons; F-ratio ≤ 5.312; df = 1, 2; P ≥ 0.148; <xref ref-type="table" rid="table2">Table 2</xref>). By number, zooplankton were more common through June 6 and chironomids were more abundant at pond harvest (<xref ref-type="table" rid="table2">Table 2</xref>). Walleye δ<sup>13</sup>C signatures were significantly less enriched in lined ponds on both May 31 (F-ratio = 44.901, df = 1, 2, P = 0.022) and at pond harvest (F-ratio = 461.025, df = 1, 2, P = 0.002). Walleye δ<sup>13</sup>C signatures increased in both pond types over time (<xref ref-type="table" rid="table3">Table 3</xref>).</p></sec><sec id="s3_3"><title>3.3. Water Chemistry</title><p>Water temperature tended to be slightly higher in the lined ponds during most of the culture period (<xref ref-type="fig" rid="fig2">Figure 2</xref>). The lined ponds accumulated 18 more temperature units than the earthen ponds from May 14 through June 12, 2016.</p><p>Ammonia-nitrogen concentrations began low in both treatments and were not significantly different prior to May 30 (F-ratio = 0.200, df = 1, 14, P = 0.662; <xref ref-type="fig" rid="fig3">Figure 3</xref>, <xref ref-type="table" rid="table4">Table 4</xref>). After May 30, concentrations remained low in earthen ponds (F-ratio = 1.190, df = 6, 7, P = 0.407), but significantly increased to 0.3 mg/L in lined ponds (F-ratio = 53.367, df = 6, 7, P &lt; 0.000) before significantly decreasing on June 10 (P = 0.001). Ammonia-nitrogen concentrations were significantly higher in lined compared to earthen ponds after May 30 (F-ratio = 24.857, df = 1, 10, P = 0.001).</p><p>No significant difference in pH between pond substrate types was identified before (F-ratio = 0.878, df = 1, 14, P = 0.762) or after May 30 (F-ratio = 1.558, df</p><table-wrap id="table2" ><label><xref ref-type="table" rid="table2">Table 2</xref></label><caption><title> Mean (&#177; SE) number of zooplankton and larval chironomids per gastrointestinal tract of walleye reared at Blue Dog State Fish Hatchery, South Dakota, in two ponds of each substrate type during 2016. Ten walleyes were examined per pond per date. Lined ponds were stocked on May 11 or 12, while earthen ponds were stocked on May 10. No significant differences (P &gt; 0.05) were detected between treatments at any sampling date</title></caption><table><tbody><thead><tr><th align="center" valign="middle"  rowspan="2"  >Pond type</th><th align="center" valign="middle"  colspan="3"  >Zooplankton/Walleye</th><th align="center" valign="middle"  colspan="3"  >Chironomids/Walleye</th></tr></thead><tr><td align="center" valign="middle" >May 31</td><td align="center" valign="middle" >June 6</td><td align="center" valign="middle" >Harvest</td><td align="center" valign="middle" >May 31</td><td align="center" valign="middle" >June 6</td><td align="center" valign="middle" >Harvest</td></tr><tr><td align="center" valign="middle" >Lined</td><td align="center" valign="middle" >10.1 &#177; 4.5</td><td align="center" valign="middle" >23.4 &#177; 5.8</td><td align="center" valign="middle" >2.6 &#177; 2.4</td><td align="center" valign="middle" >1.3 &#177; 0.9</td><td align="center" valign="middle" >0.3 &#177; 0.3</td><td align="center" valign="middle" >3.4 &#177; 2.8</td></tr><tr><td align="center" valign="middle" >Earthen</td><td align="center" valign="middle" >11.8 &#177; 1.2</td><td align="center" valign="middle" >10.0 &#177; 0.4</td><td align="center" valign="middle" >1.4 &#177; 0.4</td><td align="center" valign="middle" >2.1 &#177; 0.9</td><td align="center" valign="middle" >2.0 &#177; 0.4</td><td align="center" valign="middle" >5.1 &#177; 2.7</td></tr></tbody></table></table-wrap><table-wrap id="table3" ><label><xref ref-type="table" rid="table3">Table 3</xref></label><caption><title> Mean (&#177;SE) δ<sup>13</sup>C (‰) signatures for walleye collected from lined and earthen ponds on May 31 and at pond harvest (June 14 or 16, 2016) at Blue Dog State Fish Hatchery, South Dakota. Lined ponds were stocked on May 11 or 12, while earthen ponds were stocked on May 10</title></caption><table><tbody><thead><tr><th align="center" valign="middle" >Date</th><th align="center" valign="middle" >May 31 δ<sup>13</sup>C (‰)</th><th align="center" valign="middle" >Harvest δ<sup>13</sup>C (‰)</th></tr></thead><tr><td align="center" valign="middle" >Lined</td><td align="center" valign="middle" >−29.7 &#177; 0.2<sup>y</sup></td><td align="center" valign="middle" >−27.0 &#177; 0.2<sup>y</sup></td></tr><tr><td align="center" valign="middle" >Earthen</td><td align="center" valign="middle" >−27.7 &#177; 0.2<sup>z</sup></td><td align="center" valign="middle" >−23.7 &#177; 0.1<sup>z</sup></td></tr></tbody></table></table-wrap><p>Differing superscripts within a column indicate a significant difference (P ≤ 0.05).</p><table-wrap id="table4" ><label><xref ref-type="table" rid="table4">Table 4</xref></label><caption><title> Mean (&#177;SE) concentrations of ammonia-nitrogen (mg/L), pH, and dissolved oxygen (mg/L) for lined and earthen substrate ponds during two periods of the 2016 walleye culture period at Blue Dog State Fish Hatchery, South Dakota. Lined ponds were stocked on May 11 or 12, while earthen ponds were stocked on May 10. Variables were measured seven times at three to seven-day increments with four measurements occurring before and three measurements occurring after May 30</title></caption><table><tbody><thead><tr><th align="center" valign="middle"  rowspan="2"  >Pond type</th><th align="center" valign="middle"  colspan="3"  >Before May 30</th><th align="center" valign="middle"  colspan="3"  >After May 30</th></tr></thead><tr><td align="center" valign="middle" >Ammonia-N</td><td align="center" valign="middle" >pH</td><td align="center" valign="middle" >D. Oxygen*</td><td align="center" valign="middle" >Ammonia-N</td><td align="center" valign="middle" >pH</td><td align="center" valign="middle" >D. Oxygen*</td></tr><tr><td align="center" valign="middle" >Lined</td><td align="center" valign="middle" >0.02 &#177; 0.01</td><td align="center" valign="middle" >8.48 &#177; 0.03</td><td align="center" valign="middle" >9.46 &#177; 0.39</td><td align="center" valign="middle" >0.22 &#177; 0.04<sup>y</sup></td><td align="center" valign="middle" >8.17 &#177; 0.05</td><td align="center" valign="middle" >7.95 &#177; 0.47<sup>y</sup></td></tr><tr><td align="center" valign="middle" >Earthen</td><td align="center" valign="middle" >0.01 &#177; 0.01</td><td align="center" valign="middle" >8.47 &#177; 0.03</td><td align="center" valign="middle" >9.92 &#177; 0.32</td><td align="center" valign="middle" >0.01 &#177; &lt;0.01<sup>z</sup></td><td align="center" valign="middle" >8.27 &#177; 0.06</td><td align="center" valign="middle" >9.29 &#177; 0.25<sup>z</sup></td></tr></tbody></table></table-wrap><p>*Refers to Dissolved Oxygen; Differing superscripts within a column indicate a significant difference between pond type (P ≤ 0.05).</p><p>= 1, 10, P = 0.240; <xref ref-type="table" rid="table4">Table 4</xref>). In earthen ponds, pH remained stable between May 12 and June 10 (F-ratio = 2.001, df = 6, 7, P = 0.193; <xref ref-type="fig" rid="fig3">Figure 3</xref>). However, pH changed significantly over that time in lined ponds (F-ratio = 47.656; df = 6, 7, P &lt; 0.000). A significant decline began on May 25 and continued through May 31 (P ≤ 0.001) followed by a significant increase on June 10 (P = 0.003).</p><p>Dissolved oxygen was not significantly different between treatments prior to May 30 (F-ratio = 0.878, df = 1, 14, P = 0.365), but was significantly lower in lined ponds after May 30 (F-ratio = 6.482, df = 1, 10, P = 0.029; <xref ref-type="table" rid="table4">Table 4</xref>). Both treatments began above 10 mg/L and significantly changed over time (lined: F-ratio = 111.753, df = 6, 7, P &lt; 0.000; earthen: F-ratio = 7.764, df = 6, 7, P =</p><p>0.008; <xref ref-type="fig" rid="fig3">Figure 3</xref>). In earthen ponds, dissolved oxygen gradually decreased during the interval (P ≤ 0.049) with the lowest mean value (8.8 mg/L) occurring on June 10. In lined ponds, dissolved oxygen concentration decreased abruptly to 6.5 mg/L (P ≤ 0.02) through May 31 before increasing on June 3 and 10 (P &lt; 0.001).</p></sec></sec><sec id="s4"><title>4. Discussion</title><p>Lined ponds enhanced walleye performance measures. Specifically, an increased number of walleyes and yield were produced without reducing individual fish size at harvest compared to earthen ponds. This is noteworthy because walleye size typically decreases as harvest density increases [<xref ref-type="bibr" rid="scirp.106838-ref7">7</xref>]. Moreover, walleyes grew faster during the early and middle stages of the approximate 35-d interval even though a higher stocking density was used. When the same stocking density was used between pond types, yield and fish size at harvest were increased, but the number harvested was not different [<xref ref-type="bibr" rid="scirp.106838-ref1">1</xref>]. Relating the increased growth rates and production with the number of zooplankton and chironomids within walleye digestive tracts was difficult as no statistical differences were detected. The increased walleye density in lined ponds that initially grew faster, potentially indicates that more prey was being consumed during the early part of the trial. Walleyes are known to initially consume copepods and Cladocerans regardless of pond substrate [<xref ref-type="bibr" rid="scirp.106838-ref3">3</xref>] [<xref ref-type="bibr" rid="scirp.106838-ref4">4</xref>] and a spike in zooplankton consumption was noted on June 6 in lined ponds. Larval chironomids also are known to be an important walleye prey in both pond types [<xref ref-type="bibr" rid="scirp.106838-ref4">4</xref>] [<xref ref-type="bibr" rid="scirp.106838-ref8">8</xref>] and their consumption was occurring when the initial growth advantage was measured. While no differences in food habits were clearly identified, the initial increased growth of higher numbers of walleyes provides evidence that an enhanced nutritional food web was available in lined ponds, and this occurred with reduced alfalfa meal use.</p><p>Walleye δ<sup>13</sup>C signatures were consistently more negative (i.e., less enriched) in lined ponds. Reduced enrichment of the walleyes (i.e., consumer) reflects prey consumption that has an increased pelagic signature. Pelagic producers exhibit a substantial reduction (e.g., 6‰) in δ<sup>13</sup>C enrichment compared to benthic producers [<xref ref-type="bibr" rid="scirp.106838-ref13">13</xref>] and little (&lt; 1‰)<sub> </sub>fractionation occurs when prey is assimilated [<xref ref-type="bibr" rid="scirp.106838-ref20">20</xref>]. While walleye diets were generally similar between pond types throughout the culture interval, the reduced enrichment of walleye on May 31 (2‰ more negative) and at harvest (3.3‰ more negative) indicates that the food web (i.e., zooplankton and chironomids) contains a more pelagic signature in lined ponds. At harvest, walleye reflected an increase in carbon enrichment (i.e., more benthic signature) in both pond types likely owing to an increase in larval chironomid consumption as noted in the walleye diet analysis.</p><p>Higher ammonia-nitrogen concentrations may have contributed to the increased pelagic signature of the walleyes in lined ponds. Ammonia is readily used by phytoplankton that promote zooplankton growth and reproduction [<xref ref-type="bibr" rid="scirp.106838-ref21">21</xref>] [<xref ref-type="bibr" rid="scirp.106838-ref22">22</xref>]. Inorganic nitrogen is needed in higher concentrations than phosphate (20 to 1) to enhance the phytoplankton that support the zooplankton [<xref ref-type="bibr" rid="scirp.106838-ref6">6</xref>]. The available phytoplankton would also influence the signature of larval chironomids due to potential herbivory [<xref ref-type="bibr" rid="scirp.106838-ref10">10</xref>]. Additional research to include phytoplankton composition and abundances may assist with explaining the increased pelagic signature of the food web in lined ponds. Additional nutrient (i.e., nitrate and phosphate) concentrations available to phytoplankton may also prove useful as ammonia concentrations were not different between pond types until after May 30 and substantial food web development and assimilation by the walleye had already occurred.</p><p>Water temperature was slightly warmer in lined ponds between May 14 and June 12, which is similar to previous findings [<xref ref-type="bibr" rid="scirp.106838-ref1">1</xref>]. This temperature difference could be accounted for by postponing harvest one day in earthen ponds. In this study, the culture period was actually one day longer in the earthen ponds, but production in lined ponds remained higher suggesting that the available food web is more important than the slight temperature difference in explaining the enhanced walleye performance measures.</p><p>Lined ponds exhibited increased variability in the other water chemistry measures, and this occurred with reduced alfalfa meal use. After May 30, lower dissolved oxygen and higher ammonia-nitrogen concentrations combined with an abrupt pH decrease in lined ponds suggest an increased decomposition rate of the alfalfa meal [<xref ref-type="bibr" rid="scirp.106838-ref5">5</xref>] [<xref ref-type="bibr" rid="scirp.106838-ref16">16</xref>]. Slightly higher water temperatures in lined ponds would contribute to a higher decomposition rate of the fertilizer [<xref ref-type="bibr" rid="scirp.106838-ref16">16</xref>]. Additionally, these water chemistry patterns in lined ponds could be explained by a reduction in photosynthesis where zooplankton have overgrazed the edible phytoplankton [<xref ref-type="bibr" rid="scirp.106838-ref23">23</xref>] [<xref ref-type="bibr" rid="scirp.106838-ref24">24</xref>]. The dynamic patterns in water chemistry that occurred with reduced alfalfa meal use suggest that organic fertilizer is used more efficiently in lined ponds to promote increased walleye production. Emphasizing fertilizer strategies that decrease dissolved oxygen (≈ 6.5 mg/L) and increase ammonia-nitrogen (≈ 0.3 mg/L) concentrations, while maintaining pH between 8.0 and 8.2 during the second half of the rearing interval may provide improved production in earthen ponds at this facility.</p><p>Previously no meaningful biological differences in water chemistry were identified between lined and earthen-substrate ponds used in walleye production [<xref ref-type="bibr" rid="scirp.106838-ref1">1</xref>]. In the current study, the use of alfalfa meal (instead of chopped hay) emphasized water chemistry differences between substrate types and provides direction for improving production in earthen substrate ponds at this facility. Future evaluation in earthen substrate ponds should include increased rates of alfalfa meal supplemented with inorganic nitrogen (28-0-0) in an effort to promote similar water chemistry measures as observed in the lined pond treatment of this study.</p></sec><sec id="s5"><title>Acknowledgements</title><p>We would like to thank the staff at Blue Dog Hatchery including J. Broughton, R. Smidt, R. Rasmus, N. Pool, C. Haabala, C. Jung and J. Anderson for their efforts and involvement with the collection and publication of these data. Thanks to Dr. S. Chipps for his assistance in preparing samples for stable isotope analysis. Partial funding was provided by the Federal Aid to Sportfish Restoration Project F-41-D-14.</p></sec><sec id="s6"><title>Conflicts of Interest</title><p>The authors declare no conflicts of interest regarding the publication of this paper.</p></sec><sec id="s7"><title>Cite this paper</title><p>Ward, M.J. and Blackwell, B.G. (2021) Factors Associated with Increased Walleye Production in Lined Compared to Earthen-Substrate Ponds. Open Journal of Animal Sciences, 11, 50-61. https://doi.org/10.4236/ojas.2021.111005</p></sec></body><back><ref-list><title>References</title><ref id="scirp.106838-ref1"><label>1</label><mixed-citation publication-type="other" xlink:type="simple">Ward, M.J., Uphoff, C., Stane, J., Borah, B., Henry, A., Billings, J. and Johnson, B. (2011) Walleye Fingerling Culture in Earthen and Ethylene Propylene Diene Monomer-Lined Ponds. North American Journal of Aquaculture, 73, 1-7.</mixed-citation></ref><ref id="scirp.106838-ref2"><label>2</label><mixed-citation publication-type="book" xlink:type="simple">Culver, D.A. (1996) Fertilization Procedures for Pond Culture of Walleye and Saugeye. 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