<?xml version="1.0" encoding="UTF-8"?><!DOCTYPE article  PUBLIC "-//NLM//DTD Journal Publishing DTD v3.0 20080202//EN" "http://dtd.nlm.nih.gov/publishing/3.0/journalpublishing3.dtd"><article xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink" dtd-version="3.0" xml:lang="en" article-type="research article"><front><journal-meta><journal-id journal-id-type="publisher-id">JGIS</journal-id><journal-title-group><journal-title>Journal of Geographic Information System</journal-title></journal-title-group><issn pub-type="epub">2151-1950</issn><publisher><publisher-name>Scientific Research Publishing</publisher-name></publisher></journal-meta><article-meta><article-id pub-id-type="doi">10.4236/jgis.2020.123014</article-id><article-id pub-id-type="publisher-id">JGIS-101279</article-id><article-categories><subj-group subj-group-type="heading"><subject>Articles</subject></subj-group><subj-group subj-group-type="Discipline-v2"><subject>Earth&amp;Environmental Sciences</subject></subj-group></article-categories><title-group><article-title>
 
 
  Automated Burned Scar Mapping Using Sentinel-2 Imagery
 
</article-title></title-group><contrib-group><contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Dimitris</surname><given-names>Stavrakoudis</given-names></name><xref ref-type="aff" rid="aff1"><sup>1</sup></xref><xref ref-type="corresp" rid="cor1"><sup>*</sup></xref></contrib><contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Thomas</surname><given-names>Katagis</given-names></name><xref ref-type="aff" rid="aff1"><sup>1</sup></xref></contrib><contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Chara</surname><given-names>Minakou</given-names></name><xref ref-type="aff" rid="aff1"><sup>1</sup></xref></contrib><contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Ioannis</surname><given-names>Z. Gitas</given-names></name><xref ref-type="aff" rid="aff1"><sup>1</sup></xref></contrib></contrib-group><aff id="aff1"><addr-line>Laboratory of Forest Management and Remote Sensing, School of Forestry and Natural Environment, Aristotle University of Thessaloniki, Thessaloniki, Greece</addr-line></aff><pub-date pub-type="epub"><day>08</day><month>06</month><year>2020</year></pub-date><volume>12</volume><issue>03</issue><fpage>221</fpage><lpage>240</lpage><history><date date-type="received"><day>20,</day>	<month>May</month>	<year>2020</year></date><date date-type="rev-recd"><day>27,</day>	<month>June</month>	<year>2020</year>	</date><date date-type="accepted"><day>30,</day>	<month>June</month>	<year>2020</year></date></history><permissions><copyright-statement>&#169; Copyright  2014 by authors and Scientific Research Publishing Inc. </copyright-statement><copyright-year>2014</copyright-year><license><license-p>This work is licensed under the Creative Commons Attribution International License (CC BY). http://creativecommons.org/licenses/by/4.0/</license-p></license></permissions><abstract><p>
 
 
  The Sentinel-2 satellites are providing an unparalleled wealth of high-resolution remotely sensed information with a short revisit cycle, which is ideal for mapping burned areas both accurately and timely. However, the high detail and volume of information provided actually encumbers the automation of the mapping process, at least for the level of automation required to map systematically wildfires on a national level. This paper proposes a fully automated methodology for mapping burn scars using Sentinel-2 data. Information extracted from a pair of Sentinel-2 images, one pre-fire and one post-fire, is jointly used to automatically label a set of training patterns via two empirical rules. An initial pixel-based classification is derived using this training set by means of a Support Vector Machine (SVM) classifier. The latter is subsequently smoothed following a multiple spectral-spatial classification (MSSC) approach, which increases the mapping accuracy and thematic consistency of the final burned area delineation. The proposed methodology was tested on six recent wildfire events in Greece, selected to cover representative cases of the Greek ecosystems and to present challenges in burned area mapping. The lowest classification accuracy achieved was 92%, whereas Matthews correlation coefficient (MCC) was greater or equal to 0.85.
 
</p></abstract><kwd-group><kwd>Operational Burned Area Mapping</kwd><kwd> Multiple Spectral-Spatial Classification (MSSC)</kwd><kwd> Sentinel-2</kwd><kwd> Automatic Training Patterns Classification</kwd><kwd> Machine Learning</kwd></kwd-group></article-meta></front><body><sec id="s1"><title>1. Introduction</title><p>Wildfires constitute a ubiquitous problem in Mediterranean countries, introducing a high risk of direct damage to humans and structures in most of the highly populated Mediterranean countries and especially in coastal regions [<xref ref-type="bibr" rid="scirp.101279-ref1">1</xref>]. Most wildfires in Europe—over 85% of the total burned area—take place in its Mediterranean region, where about 65,000 fires occur every year on average, burning approximately half a million hectares of wildland and forest areas [<xref ref-type="bibr" rid="scirp.101279-ref2">2</xref>]. The analyses performed by the European Forest Fire Information System (EFFIS) indicate an increase in the length of the wildfire season the last 30 years, whereas the fire regime is projected to change almost everywhere in Europe the next decades [<xref ref-type="bibr" rid="scirp.101279-ref3">3</xref>].</p><p>Timely and accurate burned area mapping is essential for quantifying the environmental impact of wildfires, for compiling statistics, and for designing effective short- to mid-term impact mitigation measures (e.g., prevention of soil erosion or possible impacts of the fire/heavy rainfall combination). To support such use cases on a national level, however, the burned area mapping methodology should be as automated as possible, requiring minimum—or desirably even none—human interaction.</p><p>Satellite imagery has been successfully employed for mapping burned areas for several decades, since it offers a more accurate, seasonable, and resource-efficient alternative to field surveys [<xref ref-type="bibr" rid="scirp.101279-ref4">4</xref>], whereas it permits various levels of automation of the mapping process, especially in view of the great advancements the field of machine learning has seen the last few years. Traditionally, moderate- to coarse-resolution satellite sensors have been used for the task, such as MODIS (Moderate Resolution Imaging Spectroradiometer) [<xref ref-type="bibr" rid="scirp.101279-ref5">5</xref>] and MERIS (MEdium Resolution Imaging Spectrometer) [<xref ref-type="bibr" rid="scirp.101279-ref6">6</xref>]. These sensors offer the advantage of daily (or sub-daily) global coverage and the possibility to identify the date of the fire through a fully automated workflow. However, their coarse spatial resolution (pixel size of 500 m or greater) provides only a rough estimate of the fire perimeter.</p><p>When a detailed mapping of the affected area is required, high-resolution satellite imagery can be used instead, sacrificing the temporal frequency of sensors such as MODIS in favor of increased spatial resolution. Landsat data (having 30 m spatial resolution) have been predominately used for this purpose [<xref ref-type="bibr" rid="scirp.101279-ref7">7</xref>] [<xref ref-type="bibr" rid="scirp.101279-ref8">8</xref>] [<xref ref-type="bibr" rid="scirp.101279-ref9">9</xref>], due to their rich spectral information—especially the shortwave infrared (SWIR) bands they include that are important for burned area mapping—and their free data provision policy from the United States Geological Survey (USGS) since 2008 [<xref ref-type="bibr" rid="scirp.101279-ref10">10</xref>]. However, Landsat has a temporal resolution of 16 days, which constraints the rapid mapping of wildfires, especially in regions with frequent cloud coverage (e.g., mountainous areas). Rapid and detailed mapping can be performed alternatively with commercial very high-resolution satellite imagery [<xref ref-type="bibr" rid="scirp.101279-ref11">11</xref>], but this option involves high costs especially if expedited satellite tasking is requested, which limits its applicability to few cases of special significance (e.g., when extended damages are involved).</p><p>The Sentinel-2 mission—developed and operated by the European Space Agency (ESA) as part of the Copernicus programme of the European Commission (EC)—is providing free of charge high-resolution optical imagery since 2015. Sentinel-2 data are characterized by high spatial resolution (10 - 20 m, depending on the band), rich spectral information (more or less a superset of Landsat 7 ETM+ and Landsat 8 OLI bands), and high temporal frequency (5 days), characteristics which constitute them attractive for setting up an operation burned area mapping service on a national level. Since the Sentinel-2 data are new, though, only few studies have investigated their potential for burned area mapping [<xref ref-type="bibr" rid="scirp.101279-ref12">12</xref>] [<xref ref-type="bibr" rid="scirp.101279-ref13">13</xref>] [<xref ref-type="bibr" rid="scirp.101279-ref14">14</xref>] and even fewer have proposed automated workflows for automated mapping [<xref ref-type="bibr" rid="scirp.101279-ref15">15</xref>] [<xref ref-type="bibr" rid="scirp.101279-ref16">16</xref>].</p><p>This study presents a novel methodology for mapping burned areas using Sentinel-2 data, aiming at eliminating user interaction and achieving mapping accuracy that is acceptable for operational use. The proposed methodology uses a pair of Sentinel-2 images, one acquired before the wildfire and one after the fire has been extinguished. A number of difference spectral indices are calculated and a set of empirical rules is employed in order to classify a portion of the image pixels, those that can be unambiguously characterized as burned or unburned. These pixels serve as training patterns and a supervised learning approach is employed to derive an initial mapping, implemented via the Support Vector Machine (SVM) classifier [<xref ref-type="bibr" rid="scirp.101279-ref17">17</xref>]. The latter is subsequently refined using the so-called Multiple Spectral-Spatial Classification with Minimum Spanning Forest (MSSC-MSF) approach [<xref ref-type="bibr" rid="scirp.101279-ref18">18</xref>], which eliminates the salt-and-pepper phenomenon of the pixel-based classification and increases the accuracy of the final burned area map.</p></sec><sec id="s2"><title>2. Datasets Used</title><p>The proposed methodology uses Sentinel-2 MultiSpectral Instrument (MSI) data. We did not consider the bands with spatial resolution of 60 m—which are primarily useful for atmospheric correction—neither the two additional red-edge bands (bands 5 and 7), which are primarily used for calculating spectral indices sensitive to vegetation stress. The nominal specifications [<xref ref-type="bibr" rid="scirp.101279-ref19">19</xref>] of the eight bands that were ultimately considered in this study are reported in <xref ref-type="table" rid="table1">Table 1</xref>.</p><p>Six wildfire events in 2016 and 2018 in Greece were considered in this study (<xref ref-type="table" rid="table2">Table 2</xref> and <xref ref-type="fig" rid="fig1">Figure 1</xref>), selected to cover representative cases of the Greek ecosystems and to present challenges in burned area mapping. More specifically, Elata (<xref ref-type="fig" rid="fig1">Figure 1</xref>(a)) was a sparsely vegetated environment with many plantations of mastic trees (Pistacia lentiscus). In Farakla (<xref ref-type="fig" rid="fig1">Figure 1</xref>(b)), the wildfire burned a dense pine forest and reached urban areas across the coastline. Saktouria (<xref ref-type="fig" rid="fig1">Figure 1</xref>(c)) is a typical Cretan environment, with very sparse low vegetation in rocky areas, which are typically difficult to differentiate from burned areas. Zemeno (<xref ref-type="fig" rid="fig1">Figure 1</xref>(d)) is a mountainous area with rough terrain and several agricultural fields within the burn perimeter. Finally, Kallitechnoupoli (<xref ref-type="fig" rid="fig1">Figure 1</xref>(e)) and Kineta (<xref ref-type="fig" rid="fig1">Figure 1</xref>(f)) are the two devastating wildfires of 2018 in Attica,</p><table-wrap id="table1" ><label><xref ref-type="table" rid="table1">Table 1</xref></label><caption><title> Sentinel-2 MSI bands considered and their nominal specifications</title></caption><table><tbody><thead><tr><th align="center" valign="middle" >Band</th><th align="center" valign="middle" >Description</th><th align="center" valign="middle" >Spatial Resolution (m)</th><th align="center" valign="middle" >Central wavelength (nm)</th><th align="center" valign="middle" >Bandwidth (nm)</th></tr></thead><tr><td align="center" valign="middle" >B02</td><td align="center" valign="middle" >Blue</td><td align="center" valign="middle" >10</td><td align="center" valign="middle" >490</td><td align="center" valign="middle" >65</td></tr><tr><td align="center" valign="middle" >B03</td><td align="center" valign="middle" >Green</td><td align="center" valign="middle" >10</td><td align="center" valign="middle" >560</td><td align="center" valign="middle" >35</td></tr><tr><td align="center" valign="middle" >B04</td><td align="center" valign="middle" >Red</td><td align="center" valign="middle" >10</td><td align="center" valign="middle" >665</td><td align="center" valign="middle" >30</td></tr><tr><td align="center" valign="middle" >B06</td><td align="center" valign="middle" >Red edge</td><td align="center" valign="middle" >20</td><td align="center" valign="middle" >740</td><td align="center" valign="middle" >15</td></tr><tr><td align="center" valign="middle" >B08</td><td align="center" valign="middle" >Near infrared (NIR)</td><td align="center" valign="middle" >10</td><td align="center" valign="middle" >842</td><td align="center" valign="middle" >115</td></tr><tr><td align="center" valign="middle" >B8A</td><td align="center" valign="middle" >NIR (narrow)</td><td align="center" valign="middle" >20</td><td align="center" valign="middle" >865</td><td align="center" valign="middle" >20</td></tr><tr><td align="center" valign="middle" >B11</td><td align="center" valign="middle" >SWIR 1</td><td align="center" valign="middle" >20</td><td align="center" valign="middle" >1610</td><td align="center" valign="middle" >90</td></tr><tr><td align="center" valign="middle" >B12</td><td align="center" valign="middle" >SWIR 2</td><td align="center" valign="middle" >20</td><td align="center" valign="middle" >2190</td><td align="center" valign="middle" >180</td></tr></tbody></table></table-wrap><table-wrap id="table2" ><label><xref ref-type="table" rid="table2">Table 2</xref></label><caption><title> Wildfire events in Greece considered in this study</title></caption><table><tbody><thead><tr><th align="center" valign="middle" >Location</th><th align="center" valign="middle" >Region</th><th align="center" valign="middle" >Fire Start Date</th><th align="center" valign="middle" >Pre-fire image date</th><th align="center" valign="middle" >Post-fire image date</th><th align="center" valign="middle" >Sentinel-2 tile</th></tr></thead><tr><td align="center" valign="middle" >Elata</td><td align="center" valign="middle" >Chios</td><td align="center" valign="middle" >23/07/2016</td><td align="center" valign="middle" >20/07/2016</td><td align="center" valign="middle" >27/07/2016</td><td align="center" valign="middle" >T35SMC</td></tr><tr><td align="center" valign="middle" >Farakla</td><td align="center" valign="middle" >Euboea</td><td align="center" valign="middle" >30/07/2016</td><td align="center" valign="middle" >23/07/2016</td><td align="center" valign="middle" >02/08/2016</td><td align="center" valign="middle" >T34SGH</td></tr><tr><td align="center" valign="middle" >Saktouria</td><td align="center" valign="middle" >Crete</td><td align="center" valign="middle" >30/07/2016</td><td align="center" valign="middle" >27/07/2016</td><td align="center" valign="middle" >06/08/2016</td><td align="center" valign="middle" >T35SKU</td></tr><tr><td align="center" valign="middle" >Zemeno</td><td align="center" valign="middle" >Corinthia</td><td align="center" valign="middle" >23/07/2018</td><td align="center" valign="middle" >13/07/2018</td><td align="center" valign="middle" >28/07/2018</td><td align="center" valign="middle" >T34SFH</td></tr><tr><td align="center" valign="middle" >Kallitechnoupoli</td><td align="center" valign="middle" >Attica</td><td align="center" valign="middle" >23/07/2018</td><td align="center" valign="middle" >05/07/2018</td><td align="center" valign="middle" >04/08/2018</td><td align="center" valign="middle" >T34SGH</td></tr><tr><td align="center" valign="middle" >Kineta</td><td align="center" valign="middle" >Attica</td><td align="center" valign="middle" >23/07/2018</td><td align="center" valign="middle" >13/07/2018</td><td align="center" valign="middle" >14/08/2018</td><td align="center" valign="middle" >T34SFH</td></tr></tbody></table></table-wrap><p>where the fire expanded to populated areas with significant vegetation cover (mostly pine trees in-between houses and within house yards).</p><p>We used Level-2A products, i.e., atmospherically corrected Sentinel-2 images (bottom-of-atmosphere reflectance values) [<xref ref-type="bibr" rid="scirp.101279-ref20">20</xref>]. The 2018 images were downloaded directly as Level-2A products from the Copernicus Open Access Hub (https://scihub.copernicus.eu/). For the 2016 images, the Sen2Cor processor (http://step.esa.int/main/third-party-plugins-2/sen2cor/) was run locally to derive the Level-2A products. A rectangular subset of the image that includes the burned area with a small buffer around was cropped out of each original Sentinel-2 tile, as shown in <xref ref-type="fig" rid="fig1">Figure 1</xref>. In the current work, this was done manually, although we presently explore ways to automate this step as well. The bands reported in <xref ref-type="table" rid="table1">Table 1</xref> were subsequently stacked into a single image, considering absolute reflectance values in the range [0, 1] (i.e., dividing the Level-2A product’s pixel values with 10,000). For this purpose, all 20 m resolution images were resampled to 10 m through a nearest neighbor resampling. Moreover, non-land areas were masked out using the official NUTS (Nomenclature of Territorial Units for Statistics) layer.</p><p>For validation purposes, burned area perimeters derived from the so-called Object-based Burned Area Mapping (OBAM) service were used, which was developed within the context of the Greek National Observatory of Forest Fires (NOFFi) [<xref ref-type="bibr" rid="scirp.101279-ref21">21</xref>]. NOFFi-OBAM is a semi-automated methodology that uses a single post-fire Sentinel-2 image to derive accurate burned area perimeters, but involves significant user interaction. We should note that although these reference mappings were derived from a semi-automated methodology, manual corrections were performed at the end through careful photointerpretation. Therefore, the reference dataset is accurate, at least to the level allowed by Sentinel-2’s spatial resolution (which in any case is high enough to support the photointerpretation process).</p></sec><sec id="s3"><title>3. Methodology</title><p><xref ref-type="fig" rid="fig2">Figure 2</xref> depicts the workflow of the proposed methodology. First, spectral indices are calculated from both the pre-fire and post-fire Sentinel-2 images (Level-2A products, as mentioned previously). The differences (or ratio) of these indices are used to label a portion of the image’s pixels through a set of empirical rules, which constitute the training set’s labels. These rules are defined in a way such as only pixels that can be characterized unambiguously as burned or unburned are labeled, in order to avoid introducing misclassifications into the training set as much as possible. An augmented set of features, comprising the post-fire image’s bands values (reflectance values) and the difference/ratio spectral indices, is used to perform a preliminary pixel-based classification via the SVM classifier. The latter is subsequently refined via the MSSC-MSF methodology, out of which the final burned area perimeter is obtained. The rest of this section details each step of the proposed methodology.</p><sec id="s3_1"><title>3.1. Spectral Indices</title><p>A number of spectral indices frequently used in burned area mapping studies have been calculated, which are reported in <xref ref-type="table" rid="table3">Table 3</xref>. Most of them employ the classical normalized difference formulation of the Normalized Difference Vegetation Index (NDVI) [<xref ref-type="bibr" rid="scirp.101279-ref22">22</xref>], but using one or both of the SWIR bands, which are sensitive to moisture content and consequently facilitate the discrimination of the burned areas. The indices are calculated considering the ground reflectance values of the Level-2A products in the range [ 0 , 1 ] , from either the pre-fire image or the post-fire one or both (as described in the following subsections). In the following, we use the notation S I pre and S I post to describe any index S I calculated from the pre-fire or the post-fire image, respectively (e.g., NDVI pre ). Moreover, the empirical rule-based classification (described in the next subsection) also considers the difference between the pre-fire and post-fire values for some of the indices, which is an indication of disturbance resulting from the fire. The difference, which is denoted as d S I for any index S I (e.g., dNBR ), is calculated as pre-fire minus post-fire value, i.e., d S I = S I pre − S I post .</p></sec><sec id="s3_2"><title>3.2. Empirical Rule-Based Classification</title><p>The supervised classification approach followed by the proposed methodology requires a training set that is labeled automatically. To do so, we defined two</p><table-wrap id="table3" ><label><xref ref-type="table" rid="table3">Table 3</xref></label><caption><title> Spectral indices considered in this study. The Sentinel-2 band names are those reported in <xref ref-type="table" rid="table1">Table 1</xref></title></caption><table><tbody><thead><tr><th align="center" valign="middle" >Acronym</th><th align="center" valign="middle" >Name</th><th align="center" valign="middle" >Equation</th><th align="center" valign="middle" >Introduced in</th></tr></thead><tr><td align="center" valign="middle" >NDVI</td><td align="center" valign="middle" >Normalized difference vegetation index</td><td align="center" valign="middle" >( B8A − B04 ) / ( B8A + B04 )</td><td align="center" valign="middle" >[<xref ref-type="bibr" rid="scirp.101279-ref22">22</xref>]</td></tr><tr><td align="center" valign="middle" >MSAVI2</td><td align="center" valign="middle" >Modified soil-adjusted vegetation index 2</td><td align="center" valign="middle" >0.5 ⋅ { ( 2 ⋅ B8A + 1 ) − ( 2 ⋅ B8A + 1 ) 2 − 8 ⋅ ( B8A-B04 ) }</td><td align="center" valign="middle" >[<xref ref-type="bibr" rid="scirp.101279-ref23">23</xref>]</td></tr><tr><td align="center" valign="middle" >CSI</td><td align="center" valign="middle" >Char soil index</td><td align="center" valign="middle" >B 8 A / B 12</td><td align="center" valign="middle" >[<xref ref-type="bibr" rid="scirp.101279-ref24">24</xref>]</td></tr><tr><td align="center" valign="middle" >MIRBI</td><td align="center" valign="middle" >Mid-infrared burn index</td><td align="center" valign="middle" >10 ⋅ B12 − 9.8 ⋅ B11 + 2</td><td align="center" valign="middle" >[<xref ref-type="bibr" rid="scirp.101279-ref25">25</xref>]</td></tr><tr><td align="center" valign="middle" >NBR</td><td align="center" valign="middle" >Normalized burn ratio</td><td align="center" valign="middle" >( B8A − B12 ) / ( B8A + B12 )</td><td align="center" valign="middle" >[<xref ref-type="bibr" rid="scirp.101279-ref26">26</xref>]</td></tr><tr><td align="center" valign="middle" >NBR2</td><td align="center" valign="middle" >Normalized burn ratio 2</td><td align="center" valign="middle" >( B11 − B12 ) / ( B11 + B12 )</td><td align="center" valign="middle" >[<xref ref-type="bibr" rid="scirp.101279-ref27">27</xref>]</td></tr><tr><td align="center" valign="middle" >NDII</td><td align="center" valign="middle" >Normalized difference infrared index</td><td align="center" valign="middle" >( B8A − B11 ) / ( B8A + B11 )</td><td align="center" valign="middle" >[<xref ref-type="bibr" rid="scirp.101279-ref28">28</xref>]</td></tr><tr><td align="center" valign="middle" >MNDWI</td><td align="center" valign="middle" >Modified normalized difference water index</td><td align="center" valign="middle" >( B03 − B11 ) / ( B03 + B11 )</td><td align="center" valign="middle" >[<xref ref-type="bibr" rid="scirp.101279-ref29">29</xref>]</td></tr></tbody></table></table-wrap><p>empirical rules that employ thresholds on differences or ratios of the pre-fire and post-fire spectral indices, following a similar approach with previous studies [<xref ref-type="bibr" rid="scirp.101279-ref8">8</xref>] [<xref ref-type="bibr" rid="scirp.101279-ref15">15</xref>]. It is generally impossible to define empirical rules that will classify correctly all (or almost all) pixels, due to the great variety of ecosystem types (e.g., sparsely vegetated areas, dense forests, shrublands, agricultural or pasture areas, etc.), illumination conditions, topography, and other factors. Therefore, these rules are defined in a way such as only pixels that can be characterized unambiguously as burned or unburned are labeled, in order to avoid introducing misclassifications into the training set as much as possible.</p><p>To this end, the features used to define the rules and the respective threshold values were determined empirically through a trial-and-error procedure on many wildfire events in Greece, in a way that only unambiguous burned or unburned pixels were labeled, in order to avoid introducing errors within the training set. Eventually, a pixel is classified as burned if it satisfies the rule defined by Equations (1)-(2):</p><p>MNDWI pre &lt; − 0.3                     A N D   [ ( B8A ratio &gt; 0.3   O R   dMIRBI &lt; − 1.5 )   A N D ​   dNDII &gt; 0.02 ] (1)</p><p>where</p><p>B8A ratio = B8A pre B8A post − 1 . (2)</p><p>Accordingly, an object is classified as unburned if it satisfies the rule defined by Equation (3):</p><p>MNDWI pre &gt; − 0.25   O R   [ dNBR &lt; − 0.015   O R ​   dNBR2 &lt; − 0.015 ] . (3)</p><p>In both cases, the pre-fire MNDWI index is considered for discriminating water surfaces and artificial areas (buildings, roads, etc.), whereas the vegetation or burned area identification is performed by the remaining part of the corresponding rule. To avoid misclassifications by differences in illumination between the pre-fire and post-fire image acquisitions—possibly in combination with topography—a morphological opening (erosion followed by dilation) operator [<xref ref-type="bibr" rid="scirp.101279-ref30">30</xref>] is applied to the resulting rule-based classified image, considering a square structuring element with a side of 3 pixels (i.e., the 8-neighborhood). The opening operator effectively removes isolated single-pixel classifications, which exhibit a higher probability of having been misclassified.</p><p>Depending on the area, a larger or smaller proportion of pixels may be classified by the above procedure. Densely vegetated forest areas or severely burned areas are more likely to be labeled. In any case, the labeled pixels are used to formulate the training set and the remaining ones are categorized by the supervised classifier, as explained in the following.</p></sec><sec id="s3_3"><title>3.3. Initial Pixel-Based Classification</title><p>The dataset used for the supervised classification considers 21 features extracted from multiple sources (“classification features image” module in <xref ref-type="fig" rid="fig2">Figure 2</xref>). More specifically, it is formulated considering:</p><p>1) the eight bands of the post-fire Sentinel-2 image reported in <xref ref-type="table" rid="table1">Table 1</xref>,</p><p>2) the first seven spectral indices of <xref ref-type="table" rid="table3">Table 3</xref> calculated from the post-fire image (NDVI<sub>post</sub>, MSAVI2<sub>post</sub>, CSI<sub>post</sub>, MIRBI<sub>post</sub>, NBR<sub>post</sub>, NBR2<sub>post</sub>, and NDII<sub>post</sub>), and</p><p>3) all features considered in the empirical rules of Equations (1)-(3), i.e., B8A<sub>ratio</sub>, dMIRBI, dNDII, dNBR, dNBR2, and MNDWI<sub>pre</sub>).</p><p>Having defined the feature set and the training set from the previous step, an SVM classification model [<xref ref-type="bibr" rid="scirp.101279-ref17">17</xref>] is learned subsequently, in order to classify the remaining image pixels. We used a radial basis function (RBF) kernel for the SVM formulation. The penalty constant C and the RBF kernel’s parameter γ are optimized via a 5-fold cross-validation procedure on all possible combinations for the two parameters, considering an exponentially increasing grid of possible values for each parameter. The trained SVM model is subsequently applied to classify all pixels not labeled by the empirical rules, thus resulting in the initial pixel-based classification map.</p></sec><sec id="s3_4"><title>3.4. Final Burned Scar Map</title><p>Pixel-based classification are typically severely affected by the salt-and-pepper phenomenon. The latter characterizes the phenomenon whereby individual pixels or small isolated regions are misclassified, either as unburned within the fire perimeter or as burned outside—and in many cases far away for—the fire perimeter, with a human observer being able to identify them easily as errors through visual inspection. These isolated errors are the result of image artifacts (because of illumination angle, topography, specular reflections, etc.) in combination with the fact that the pixel-based classification does not exploit any spatial information and the phenomenon becomes more prominent with the increase of spatial resolution. To overcome this limitation, the initial pixel-based classification described in the previous subsection is refined via the MSSC-MSF approach [<xref ref-type="bibr" rid="scirp.101279-ref18">18</xref>], which can effectively exploit both spatial and spectral information.</p><p>Given an input image and a pixel-based classification, MSSC-MSF starts by segmenting the image by means of three different image segmentation algorithms (see <xref ref-type="fig" rid="fig2">Figure 2</xref>). For this purpose, we used the watershed segmentation [<xref ref-type="bibr" rid="scirp.101279-ref31">31</xref>], the Fuzzy C-Means (FCM) clustering [<xref ref-type="bibr" rid="scirp.101279-ref32">32</xref>], and the mean shift segmentation [<xref ref-type="bibr" rid="scirp.101279-ref33">33</xref>] algorithms. In all cases, the segmentation was performed considering only the four 10 m bands of Sentinel-2 (B02, B03, B04, and B08 in <xref ref-type="table" rid="table1">Table 1</xref>). This choice was made in order to a) reduce the overall computation requirements, b) exploit the finest spatial resolution provided by Sentinel-2, and c) increase the methodology’s generalization capabilities by using a simpler feature set for the segmentation process than that used for the pixel-based classification.</p><p>Watershed is a morphological approach to image segmentation that combines region growing and edge detection. The method is typically applied to a gradient of the original image and segments it into small adjacent but non-overlapping regions, where each region is associated with one minimum (i.e., homogeneous region) of the gradient image. Similarly to the original approach [<xref ref-type="bibr" rid="scirp.101279-ref18">18</xref>], we used the robust color morphological gradient (RCMG) [<xref ref-type="bibr" rid="scirp.101279-ref34">34</xref>] for this purpose. Conversely, FCM is a clustering algorithm, but we can derive a segmentation of the image by identifying and uniquely labeling the connected components (CCs) on the resulting clustering map. Final, mean shift is an efficient feature-space analysis approach that has been successfully used in the past for remotely sensed image segmentation [<xref ref-type="bibr" rid="scirp.101279-ref35">35</xref>] [<xref ref-type="bibr" rid="scirp.101279-ref36">36</xref>], as it balances between the spectral and the spatial information provided by the multispectral image.</p><p>For each segmentation, an equivalent classification map is produced fusing the segmentation result with the pixel-based classification obtained by SVM. More specifically, a majority voting is performed within each segment of the image, i.e., all pixels belonging to the segment are assigned to the class exhibiting the highest frequency in the classification map within this segment. Ultimately, the three independent classification maps are fused to select a set of markers. A pixel is labeled as marker if all three independent classification maps agree (i.e., belong the same class, in our case, either burned or unburned). Marked pixels retain their class, whereas all other are considered as unclassified. Effectively, this Multiple Spectral-Spatial Classification (MSSC) approach eliminates the salt-and-pepper phenomenon of the base pixel-based classification by exploiting the spatial information, which is provided by the segment-wise processing of the image. If all three independent classifications agree, it is assumed that the pixel has been correctly classified (markers), whereas the remaining pixels are considered ambiguous.</p><p>Finally, those ambiguous pixels are labeled by growing a Minimum Spanning Forest (MSF) rooted from the markers. Each image pixel is considered as a vertex of an undirected graph, connected with its eight immediate neighbors through edges. A weight is assigned in each edge, which is proportional to the dissimilarity between the two pixels. As a measure of dissimilarity, we used the spectral angle mapper (SAM) measure, which is defined by Equation (4):</p><p>SAM ( v i , v j ) = ∑ b = 1 B v i b ⋅ v j b ∑ b = 1 B v i b 2 ⋅ ∑ b = 1 B v j b 2 (4)</p><p>where B is the cardinality of the feature space (i.e., number of bands in the image) and v i = { v i 1 , … , v i B } and v j = { v j 1 , … , v j B } are the feature vectors of two neighboring pixels. The absolute SAM value is maximized for dissimilar feature vectors and minimized for equal ones. As shown in <xref ref-type="fig" rid="fig2">Figure 2</xref>, the SAM measure is calculated considering the full classification feature space, comprising the 21 features described in the previous subsection. In the case that two neighboring pixels are both markers, a zero weight is assigned if they belong to the same class and an infinite weight otherwise.</p><p>An additional vertex for each class (here two, burned or unburned) is inserted into the graph and connected with all markers belonging to the respective class. A root vertex is also inserted, connected with those extra vertices. With this configuration, running a minimum spanning tree algorithm (e.g., Prim's algorithm [<xref ref-type="bibr" rid="scirp.101279-ref37">37</xref>]) and then removing the extra vertices induces an MSF over the graph. Assigning all pixels grown from each marker to its class, ultimately results in labeling all unclassified pixels in the image. Effectively, each marker grows its tree by labeling neighboring unlabeled pixels, in a way that the total dissimilarity among pixels is minimized. A detailed description of the MSF procedure can be found in [<xref ref-type="bibr" rid="scirp.101279-ref18">18</xref>] and [<xref ref-type="bibr" rid="scirp.101279-ref38">38</xref>].</p><p>Vectorizing the final classification map and keeping only the areas labeled as burned, we derive the final burned area perimeter, which can be subsequently viewed or analyzed in a GIS environment.</p></sec></sec><sec id="s4"><title>4. Results</title><sec id="s4_1"><title>4.1. Example of the Proposed Algorithm’s Application</title><p>Before reporting the numerical results, we provide here an example of the proposed algorithm’s application in <xref ref-type="fig" rid="fig3">Figure 3</xref>, in order to visually explain the various steps of the algorithm. We use the case of the Kallitechnoupoli wildfire (see <xref ref-type="table" rid="table2">Table 2</xref>), with <xref ref-type="fig" rid="fig3">Figure 3</xref>(a) showing a false-color composite of the post-fire Sentinel-2 image and the reference burned area perimeter superimposed with a black line. This was a devasting wildfire that started on July 23, 2018 in Attica, Greece and claimed the lives of more than 100 people. It presents several difficulties as a burned area mapping task, because the fire expanded to populated areas with significant vegetation cover (mostly pine trees in-between houses and within house yards), with some of the residential properties completely destroyed and others partially burned. As such, several regions in the scene are difficult to be correctly classified by a fully automated algorithm.</p><p>The training set derived from the empirical rules (see Section 3.2) comprises</p><p>only the unambiguous burned or unburned pixels (<xref ref-type="fig" rid="fig3">Figure 3</xref>(b)), which are either severely burned vegetated areas or unburned vegetated areas. Ambiguous areas such as sparsely vegetated areas, semi-burned areas, or areas in the wildland-urban interface are (correctly) not included in the training set. The initial pixel-based SVM classification (<xref ref-type="fig" rid="fig3">Figure 3</xref>(c); see Section 3.3) exhibits a fairly good performance, but with a high salt-and-pepper phenomenon outside the fire perimeter, as well as significant omission errors within the fire perimeter.</p><p>The three spectral-spatial classifications (see Section 3.4) result in generally different results. Watershed (<xref ref-type="fig" rid="fig3">Figure 3</xref>(d)) is more or less a superpixel segmentation algorithm (i.e., it usually generates very small segments) and, as such, it removes the salt-and-pepper misclassifications, but also exhibits relatively high commission error, misclassifying large areas to the north of and outside the fire perimeter as burned. On the other hand, FCM (<xref ref-type="fig" rid="fig3">Figure 3</xref>(e)) is a clustering algorithm and, as such, it is closer to the pixel-based SVM result. The mean shift classification (<xref ref-type="fig" rid="fig3">Figure 3</xref>(f)) is somewhere in-between the previous two, since it exploits both spatial and spectral information.</p><p>The markers (<xref ref-type="fig" rid="fig3">Figure 3</xref>(g)) are defined as all pixels that the three segmentation-based classification agree. Closely inspecting <xref ref-type="fig" rid="fig3">Figure 3</xref>(a), <xref ref-type="fig" rid="fig3">Figure 3</xref>(b), and <xref ref-type="fig" rid="fig3">Figure 3</xref>(g), we can observe that indeed the hard-to-discriminate regions are left unmarked. The MSF algorithm (<xref ref-type="fig" rid="fig3">Figure 3</xref>(h)) finally labels the unmarked regions, resulting in the most accurate classification result. Comparing the initial (<xref ref-type="fig" rid="fig3">Figure 3</xref>(c)) and the final (<xref ref-type="fig" rid="fig3">Figure 3</xref>(h)) classifications, it becomes apparent that the MSSC-MSF approach improves the thematic consistency of the mapping process significantly, which is also reflected in the numerical comparison presented in the following.</p></sec><sec id="s4_2"><title>4.2. Quantitative Results</title><p>For quantifying accuracy, well-known measures derived from the confusion matrix were calculated, namely, sensitivity, specificity, accuracy, and Matthews correlation coefficient (MCC) [<xref ref-type="bibr" rid="scirp.101279-ref39">39</xref>]. Correct classifications in a confusion matrix are either true positives (TP) or true negatives (TN), i.e., pixels correctly classified as burned or unburned, respectively. The errors are described as false positives (FP; pixels classified as burned but their true label according to the reference was unburned) and false negatives (FN; pixels classified as unburned but their true label according to the reference was burned). Sensitivity is (inversely) related to omission errors (burned areas misclassified as unburned) and is defined by Equation (5):</p><p>Sensitivity = T P P , (5)</p><p>where P is the total number of pixels labeled as burned in the reference set. Specificity is related to commission errors (unburned areas misclassified as burned) and is defined by Equation (6):</p><p>Specificity = T N N , (6)</p><p>where N is the total number of pixels labeled as unburned in the reference set. Accuracy is the ratio of correctly classified areas to the area of the reference perimeter—being the most commonly used measure of classification performance—and is defined by Equation (7):</p><p>Accuracy = T P + T N P + N . (7)</p><p>Finally, MCC takes into consideration both omission and commission errors, being a correlation coefficient between the observed and predicted binary classifications and is generally regarded as a balanced measure that can be used even if the classes are of very different sizes [<xref ref-type="bibr" rid="scirp.101279-ref40">40</xref>]. It is defined by Equation (8):</p><p>M C C = T P ⋅ T N − F P ⋅ F N ( T P + F P ) ⋅ ( T P + F N ) ⋅ ( T N + F P ) ⋅ ( T N + F N ) . (8)</p><p><xref ref-type="table" rid="table4">Table 4</xref> reports the values of the accuracy measures for both the initial pixel-based SVM classification and the final ones for each test case. The proposed methodology exhibits higher accuracy values in most of the regions compared to the initial pixel-based classification, which is usually attributed to the higher sensitivity (fewer omission errors) with similar specificity values. For two cases (Zemeno and Kallitechnoupoli), the performance of the proposed method is much higher than the base classification, especially in terms of MCC values. In purely absolute terms, the proposed method exhibits classification accuracies greater or equal to 0.92 and MCC values greater or equal to 0.85. Such a performance is perfectly acceptable for operational applications on a national level, especially taking into consideration that it is a fully automated process.</p></sec><sec id="s4_3"><title>4.3. Visual Comparison</title><p>Complementary to the numerical results reported above, we provide a visual comparison between the initial pixel-based SVM classification and the final one for all six wildfires of <xref ref-type="table" rid="table2">Table 2</xref> in Figures 4-9. This comparison confirms the differences and additionally highlights the qualitative superiority of the proposed framework. One the one hand, the proposed methodology eliminates the salt-and-pepper phenomenon of the initial pixel-based classification outside the fire perimeter. Because the latter are usually isolated pixels misclassifications, the specificity measure (see <xref ref-type="table" rid="table4">Table 4</xref>) is not greatly affected negatively. Nevertheless, it is significant for the pixel-based classification in many cases, such as the Farakla (<xref ref-type="fig" rid="fig5">Figure 5</xref>), the Kallitechnoupoli (<xref ref-type="fig" rid="fig8">Figure 8</xref>), and—most prominently—the</p><table-wrap id="table4" ><label><xref ref-type="table" rid="table4">Table 4</xref></label><caption><title> Quintative comparison between the initial pixel-based SVM classification and the proposed methodology</title></caption><table><tbody><thead><tr><th align="center" valign="middle" >Method</th><th align="center" valign="middle" >Location</th><th align="center" valign="middle" >Sensitivity</th><th align="center" valign="middle" >Specificity</th><th align="center" valign="middle" >Accuracy</th><th align="center" valign="middle" >MCC</th></tr></thead><tr><td align="center" valign="middle"  rowspan="6"  >Pixel-based SVM classification</td><td align="center" valign="middle" >Elata</td><td align="center" valign="middle" >0.89</td><td align="center" valign="middle" >0.99</td><td align="center" valign="middle" >0.94</td><td align="center" valign="middle" >0.89</td></tr><tr><td align="center" valign="middle" >Farakla</td><td align="center" valign="middle" >0.98</td><td align="center" valign="middle" >0.94</td><td align="center" valign="middle" >0.96</td><td align="center" valign="middle" >0.92</td></tr><tr><td align="center" valign="middle" >Saktouria</td><td align="center" valign="middle" >0.88</td><td align="center" valign="middle" >0.98</td><td align="center" valign="middle" >0.94</td><td align="center" valign="middle" >0.87</td></tr><tr><td align="center" valign="middle" >Zemeno</td><td align="center" valign="middle" >0.98</td><td align="center" valign="middle" >0.85</td><td align="center" valign="middle" >0.89</td><td align="center" valign="middle" >0.79</td></tr><tr><td align="center" valign="middle" >Kallitechnoupoli</td><td align="center" valign="middle" >0.89</td><td align="center" valign="middle" >0.97</td><td align="center" valign="middle" >0.93</td><td align="center" valign="middle" >0.86</td></tr><tr><td align="center" valign="middle" >Kineta</td><td align="center" valign="middle" >0.87</td><td align="center" valign="middle" >0.99</td><td align="center" valign="middle" >0.93</td><td align="center" valign="middle" >0.87</td></tr><tr><td align="center" valign="middle"  rowspan="6"  >Proposed MSSC-MSF framework</td><td align="center" valign="middle" >Elata</td><td align="center" valign="middle" >0.90</td><td align="center" valign="middle" >0.98</td><td align="center" valign="middle" >0.95</td><td align="center" valign="middle" >0.89</td></tr><tr><td align="center" valign="middle" >Farakla</td><td align="center" valign="middle" >0.99</td><td align="center" valign="middle" >0.94</td><td align="center" valign="middle" >0.97</td><td align="center" valign="middle" >0.93</td></tr><tr><td align="center" valign="middle" >Saktouria</td><td align="center" valign="middle" >0.87</td><td align="center" valign="middle" >0.98</td><td align="center" valign="middle" >0.93</td><td align="center" valign="middle" >0.86</td></tr><tr><td align="center" valign="middle" >Zemeno</td><td align="center" valign="middle" >0.98</td><td align="center" valign="middle" >0.90</td><td align="center" valign="middle" >0.92</td><td align="center" valign="middle" >0.85</td></tr><tr><td align="center" valign="middle" >Kallitechnoupoli</td><td align="center" valign="middle" >0.95</td><td align="center" valign="middle" >0.97</td><td align="center" valign="middle" >0.96</td><td align="center" valign="middle" >0.91</td></tr><tr><td align="center" valign="middle" >Kineta</td><td align="center" valign="middle" >0.87</td><td align="center" valign="middle" >0.99</td><td align="center" valign="middle" >0.93</td><td align="center" valign="middle" >0.87</td></tr></tbody></table></table-wrap><p>Zemeno (<xref ref-type="fig" rid="fig7">Figure 7</xref>) wildfires. On the other hand, the pixel-based SVM classification seems to systematically underestimate the burned area within the fire perimeter, resulting in higher omission error.</p></sec></sec><sec id="s5"><title>5. Conclusions and Future Work</title><p>This paper presented a novel methodology for mapping burned areas using Sentinel-2 data, without any user interaction. A pair of Sentinel-2 images, a pre-fire and a post-fire one, are used for this purpose. Difference and ratio spectral indices are calculated from this pair of images and a set of empirical rules is employed to automatically label a portion of the image pixels, which formulate the training set. The latter is used to train a pixel-based SVM classifier, which labels all other image pixels. This initial classification is further refined by the MSSC-MSF approach, which increases the mapping accuracy, mitigates the salt-and-pepper phenomenon inherent in all pixel-based classifications, and significantly increases the quality of the derived map. The results on a set of recent large wildfires in Greece showed that the proposed methodology exhibits quantitative and qualitative performance that is satisfactory for operational use on a national level, requiring at the same time no user interaction.</p><p>A notable limitation of the proposed methodology is that the empirical rules that formulate the training set for the initial pixel-based classification have been derived through a trial and error procedure. Although we tried to consider a representative—as much as possible—set of past wildfires for this purpose, it is undeniable that this approach is suboptimal and requires substantial effort for updating the rules as information from new wildfires becomes available. Perhaps most importantly, it encumbers the method’s transferability in other ecosystems with different characteristics than the Euro-Mediterranean one (i.e., Greek) considered in this study. Future work will try to address this limitation, by devising an automated methodology for updating or creating anew the empirical rules.</p></sec><sec id="s6"><title>Acknowledgements</title><p>This research is funded in the context of the project “Development of advanced algorithm and open-source software for automated burned area mapping using high-resolution data” (MIS 5005537) under the call for proposals “Supporting researchers with emphasis on new researchers” (EDULLL 34). The project is co-financed by Greece and the European Union (European Social Fund—ESF) by the Operational Programme “Human Resources Development, Education and Lifelong Learning 2014-2020”.</p></sec><sec id="s7"><title>Conflicts of Interest</title><p>The authors declare no conflicts of interest regarding the publication of this paper.</p></sec><sec id="s8"><title>Cite this paper</title><p>Stavrakoudis, D., Katagis, T., Minakou, C. and Gitas, I.Z. (2020) Automated Burned Scar Mapping Using Sentinel-2 Imagery. Journal of Geographic Information System, 12, 221-240. https://doi.org/10.4236/jgis.2020.123014</p></sec></body><back><ref-list><title>References</title><ref id="scirp.101279-ref1"><label>1</label><mixed-citation publication-type="other" xlink:type="simple">Goodwin, N.R. and Collett, L.J. (2014) Development of an Automated Method for Mapping Fire History Captured in Landsat TM and ETM + Time Series across Queensland, Australia. Remote Sensing of Environment, 148, 206-221.  
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