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D. S. Hirschberg, “A Linear Space Algorithm for Computing Maximal Common Subsequences,” Communications of the ACM, Vol. 18, No. 6, 1975, pp. 341-343. http:dx.doi.org/10.1145/360825.
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• TITLE: On the Metaheuristics Approach to the Problem of Genetic Sequence Comparison and Its Parallel Implementation

  AUTHORS: Sergey Makarkin, Boris Melnikov, Alexander Panin

  KEYWORDS: Metaheuristic Approach; Genetic Sequence Analysis; Levenshtein Distance; Strings Alignment; Parallel Programming

  JOURNAL NAME: Applied Mathematics, Vol.4 No.10A, September 30, 2013

  ABSTRACT: We describe parallel implementation of the metaheuristic approach to the problem of comparing strings representing DNA sequence. By this approach, one can define a whole new class of metrics on a set of strings; some of this metrics can lead to interesting results when used for string comparison. We propose several heuristics; compare results achieved when using those heuristics and compare parallel and sequential implementation of proposed approach.