TITLE:
Plausible combinations: An improved method to evaluate the covariate structure of Cormack-Jolly-Seber mark-recapture models
AUTHORS:
Jeffrey F. Bromaghin, Trent L. McDonald, Steven C. Amstrup
KEYWORDS:
Capture-Recapture; Survival; Model Building; Model Selection; Model Averaging; Multi-Model Inference; Covariates; Covariate Weights; CJS; Akaike’s Information Criterion; AIC; AICC
JOURNAL NAME:
Open Journal of Ecology,
Vol.3 No.1,
February
1,
2013
ABSTRACT: Mark-recapture models are extensively used in quantitative population ecology, providing estimates of population vital rates, such as survival, that are difficult to obtain using other methods. Vital rates are commonly modeled as functions of explanatory covariates, adding considerable flexibility to mark-recapture models, but also increasing the subjectivity and complexity of the modeling process. Consequently, model selection and the evaluation of covariate structure remain critical aspects of mark-recapture modeling. The difficulties involved in model selection are compounded in Cormack-Jolly-Seber models because they are composed of separate sub-models for survival and recapture probabilities, which are conceptualized independently even though their parameters are not statistically independent. The construction of models as combinations of sub-models, together with multiple potential covariates, can lead to a large model set. Although desirable, estimation of the parameters of all models may not be feasible. Strategies to search a model space and base inference on a subset of all models exist and enjoy widespread use. However, even though the methods used to search a model space can be expected to influence parameter estimation, the assessment of covariate importance, and therefore the ecological interpretation of the modeling results, the performance of these strategies has received limited investigation. We present a new strategy for searching the space of a candidate set of Cormack-Jolly-Seber models and explore its performance relative to existing strategies using computer simulation. The new strategy provides an improved assessment of the importance of covariates and covariate combinations used to model survival and recapture probabilities, while requiring only a modest increase in the number of models on which inference is based in comparison to existing techniques.