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Feig, M., Onufriev, A., Lee, M.S., Im, W., Case, D.A. and Brooks III, C.L. (2003) Performance Comparison of Generalized Born and Poisson Methods in the Calculation of Electrostatic Solvation Energies for Protein Structures. Journal of Computational Chemistry, 25, 265-284.
https://doi.org/10.1002/jcc.10378
has been cited by the following article:
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TITLE:
A Poisson Solver Based on Iterations on a Sylvester System
AUTHORS:
Michael B. Franklin, Ali Nadim
KEYWORDS:
Poisson’s Equation, Sylvester System, Multigrid
JOURNAL NAME:
Applied Mathematics,
Vol.9 No.6,
June
29,
2018
ABSTRACT: We present an iterative scheme for solving Poisson’s equation in 2D. Using finite
differences, we discretize the equation into a Sylvester system, AU +UB = F, involving tridiagonal matrices A and B. The iterations occur
on this Sylvester system directly after introducing a deflation-type parameter
that enables optimized convergence. Analytical bounds are obtained on the
spectral radii of the iteration matrices. Our method is comparable to Successive
Over-Relaxation (SOR) and amenable to compact programming via vector/array operations. It can also be implemented within a multigrid framework
with considerable improvement in performance as shown herein.