TITLE:
An in silico Analysis of Upstream Regulatory Modules (URMs) of Tapetum Specific Genes to Identify Regulatory cis-Elements and Transcription Factors
AUTHORS:
Preeti Apurve Sharma, Pradeep Kumar Burma
KEYWORDS:
Tapetum Specific Promoter, cis-Elements, Transcription Factors
JOURNAL NAME:
American Journal of Molecular Biology,
Vol.8 No.1,
December
18,
2017
ABSTRACT: The present work presents an iin silicoi analysis of Upstream Regulatory Modules (URMs) of genes expressed in tapetum specific manner in dicotyledon and monocotyledon plants. In the current analysis, we identified several motifs conserved in these URMs of which ten were observed to be part of known icisi-elements using tools and databases like MEME, PLACE, MAST and TFSEARCH. We also identified that binding sites for two transcription factors, DOF and WRKY71 were found to be present in majority of the URMs.