Prof. Kun Qu

University of Science and Technology of China, China

Email: [email protected]

Qualifications

2010 Ph.D., Indiana University Bloomington, Physical Chemistry

2004 B.Sc., University of Science and Technology of China, Chemical Physics

Publications (Selected)

1. Wang, S., Liu, N., & Qu, K. (2025). What insights can spatiotemporal esophageal atlases and deep learning bring to engineering the esophageal mucosa?. Developmental Cell, 60(9), 1279-1280.
2. Hu, Y., Wan, S., Luo, Y., Li, Y., Wu, T., Deng, W., ... & Qu, K. (2024). Benchmarking algorithms for single-cell multi-omics prediction and integration. Nature Methods, 21(11), 2182-2194.
3. Hu, Y., Wan, S., Luo, Y., Li, Y., Wu, T., Deng, W., ... & Qu, K. (2024). Benchmarking algorithms for single-cell multi-omics prediction and integration. Nature Methods, 21(11), 2182-2194.
4. Gao, X., Liu, K., Luo, S., Tang, M., Liu, N., Jiang, C., ... & Qu, K. (2024). Comparative analysis of methodologies for detecting extrachromosomal circular DNA. Nature Communications, 15(1), 9208.
5. Takashima, S., Sun, W., Otten, A. B., Cai, P., Peng, S. I., Tong, E., ... & Sun, B. K. (2024). Alternative mRNA splicing events and regulators in epidermal differentiation. Cell reports, 43(3).
6. Fang, M., Fang, J., Luo, S., Liu, K., Yu, Q., Yang, J., ... & Qu, K. (2024). eccDNA-pipe: an integrated pipeline for identification, analysis and visualization of extrachromosomal circular DNA from high-throughput sequencing data. Briefings in Bioinformatics, 25(2), bbae034.
7. Xu, H., Wang, S., Fang, M., Luo, S., Chen, C., Wan, S., ... & Qu, K. (2023). SPACEL: deep learning-based characterization of spatial transcriptome architectures. Nature Communications, 14(1), 7603.
8. Li, M., Zhou, H., Fang, M., Qu, K., & Wang, Y. (2023). Cationic Lipids‐Mediated Dual‐Targeting of Both Dendritic Cells and Tumor Cells for Potent Cancer Immunotherapy. Advanced Functional Materials, 33(46), 2306752.
9. Otten, A. B., Amarbayar, O., Cai, P., Cheng, B., Qu, K., & Sun, B. K. (2023). The long noncoding RNA PRANCR is Associated with Alternative Splicing of Fibronectin-1 in keratinocytes. Journal of Investigative Dermatology, 143(9), 1825-1830.
10. Lin, J., Dong, L., Liu, Y. M., Hu, Y., Jiang, C., Liu, K., ... & Yu, S. H. (2023). Nickle-cobalt alloy nanocrystals inhibit activation of inflammasomes. National Science Review, 10(8), nwad179.
11. Wei, M., Sun, Y., Li, S., Chen, Y., Li, L., Fang, M., ... & Xue, T. (2023). Single-cell profiling reveals Müller glia coordinate retinal intercellular communication during light/dark adaptation via thyroid hormone signaling. Protein & Cell, 14(8), 603-617.
12. Liu, N., Jiang, C., Yao, X., Fang, M., Qiao, X., Zhu, L., ... & Lin, J. (2023). Single-cell landscape of primary central nervous system diffuse large B-cell lymphoma. Cell Discovery, 9(1), 55.
13. Yu, Q., Liu, X., Fang, J., Wu, H., Guo, C., Zhang, W., ... & Qu, K. (2023). Dynamics and regulation of mitotic chromatin accessibility bookmarking at single-cell resolution. Science Advances, 9(4), eadd2175.
14. Jiang, T., Sun, W., Aji, T., Shao, Y., Guo, C., Zhang, C., ... & Wen, H. (2022). Single-cell heterogeneity of the liver-infiltrating lymphocytes in individuals with chronic echinococcus multilocularis infection. Infection and immunity, 90(11), e00177-22.
15. Feng, J., Lu, H., Ma, W., Tian, W., Lu, Z., Yang, H., ... & Zhang, H. (2022). Genome-wide CRISPR screen identifies synthetic lethality between DOCK1 inhibition and metformin in liver cancer. Protein & cell, 13(11), 825-841.

Profile Details

WoS ResearcherID: G-3359-2012

https://qulab.ustc.edu.cn/team/index.html

https://scholar.google.com/citations?user=2CdOi4EAAAAJ&hl=en

https://www.researchgate.net/profile/Kun-Qu-4