Dr. Sulbha Choudhari
Frederick National Laboratory for
Cancer Research
Leidos Biomedical Research, Inc., USA
Email: [email protected]
Qualifications
2015 Ph.D., Rutgers University, Camden,
USA
2009 M.Sc., Rutgers University, Camden,
USA
Publications (Selected)
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Stransky, L. A., Gao, W., Schmidt, L. S., Bi, K., Ricketts, C. J., Ramesh, V., ... & Kaelin Jr, W. G. (2024). Toward a CRISPR-based mouse model of Vhl-deficient clear cell kidney cancer: Initial experience and lessons learned. Proceedings of the National Academy of Sciences, 121(41), e2408549121.
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Budhu, A., Pehrsson, E. C., He, A., Goyal, L., Kelley, R. K., Dang, H., ... & Wang, X. W. (2023). Tumor biology and immune infiltration define primary liver cancer subsets linked to overall survival after immunotherapy. Cell Reports Medicine, 4(6).
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Talsania, K., Shen, T. W., Chen, X., Jaeger, E., Li, Z., Chen, Z., ... & Zhao, Y. (2022). Structural variant analysis of a cancer reference cell line sample using multiple sequencing technologies. Genome biology, 23(1), 255.
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Vo, T., Brownmiller, T., Hall, K., Jones, T. L., Choudhari, S., Grammatikakis, I., ... & Caplen, N. J. (2022). HNRNPH1 destabilizes the G-quadruplex structures formed by G-rich RNA sequences that regulate the alternative splicing of an oncogenic fusion transcript. Nucleic Acids Research, 50(11), 6474-6496.
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Lu, X., Sabbasani, V. R., Osei-Amponsa, V., Evans, C. N., King, J. C., Tarasov, S. G., ... & Walters, K. J. (2021). Structure-guided bifunctional molecules hit a DEUBAD-lacking hRpn13 species upregulated in multiple myeloma. Nature Communications, 12(1), 7318.
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Zhao, Y., Fang, L. T., Shen, T. W., Choudhari, S., Talsania, K., Chen, X., ... & Xiao, W. (2021). Whole genome and exome sequencing reference datasets from a multi-center and cross-platform benchmark study. Scientific data, 8(1), 296.
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Abdelrazek, S., Choudhari, S., Thimmapuram, J., Simon, P., Colley, M., Mengiste, T., & Hoagland, L. (2020). Changes in the core endophytic mycobiome of carrot taproots in response to crop management and genotype. Scientific reports, 10(1), 13685.
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Herbert, Z. T., Kershner, J. P., Butty, V. L., Thimmapuram, J., Choudhari, S., Alekseyev, Y. O., ... & Levine, S. S. (2018). Cross-site comparison of ribosomal depletion kits for Illumina RNAseq library construction. BMC genomics, 19, 1-10.
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Kundu, A., Day, K. O., Lessard, D. M., Gore, J. M., Yu, H., Akhter, M. W., ... & Kapoor, A. (2017). Let us know how access to this document benefits you. Lung India, 34(6), 567-8.
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Choudhari, S., & Grigoriev, A. (2017). Phylogenetic heatmaps highlight composition biases in sequenced reads. Microorganisms, 5(1), 4.
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Choudhari, S. (2015). Insights into glacial metagenome and sequence biases in comparative metagenomics (Doctoral dissertation, Rutgers University-Camden Graduate School).
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Choudhari, S., Lohia, R., & Grigoriev, A. (2014). Comparative metagenome analysis of an Alaskan glacier. Journal of bioinformatics and computational biology, 12(02), 1441003.
Profile Details
https://scholar.google.com/citations?user=-90lCksAAAAJ&hl=en
https://www.researchgate.net/profile/Sulbha-Choudhari