Molecular Dynamics Simulation - Articles - Scientific Research Publishing

MD Simulations of the P53 oncoprotein structure: the effect of the Arg273→His mutation on the DNA binding domain (Articles)

Kholmirzo Kholmurodov, Ermuhammad Dushanov, Kenji Yasuoka

Advances in Bioscience and Biotechnology Vol.2 No.5, October 13, 2011

DOI: 10.4236/abb.2011.25048 5,059 Downloads 10,188 Views Citations
Multi-Scale Modeling of Metal-Composite Interfaces in Titanium-Graphite Fiber Metal Laminates Part I: Molecular Scale (Articles)

Jacob M. Hundley, H. Thomas Hahn, Jenn-Ming Yang, Andrew B. Facciano

Open Journal of Composite Materials Vol.1 No.1, October 25, 2011

DOI: 10.4236/ojcm.2011.11003 7,739 Downloads 18,857 Views Citations
1,4-DHP-lipid parameters and rod like micellae (Articles)

Inta Liepina, Cezary Czaplewski, Adam Liwo, Gunars Duburs

Journal of Biophysical Chemistry Vol.2 No.4, November 9, 2011

DOI: 10.4236/jbpc.2011.24044 4,156 Downloads 7,896 Views Citations
Molecular dynamics simulation of the interaction of ethanol-water mixture with a Pt surface (Articles)

Kholmirzo Kholmurodov, Ermuhammad Dushanov, Kenji Yasuoka, Hagar Khalil, Ahmed Galal, Sameh Ahmed, Nasser Sweilam, Hatem Moharram

Natural Science Vol.3 No.12, December 16, 2011

DOI: 10.4236/ns.2011.312126 7,536 Downloads 15,606 Views Citations
The diffusion and concentration effects of formamide on a TiO₂ surface in the presence of a water solvent (Articles)

Ermuhammad Dushanov, Kholmirzo Kholmurodov, Kenji Yasuoka

Natural Science Vol.4 No.5, May 18, 2012

DOI: 10.4236/ns.2012.45044 5,642 Downloads 9,983 Views Citations
Melting of Argon Cluster: Dependence of Caloric Curves on MD Simulation Parameters (Articles)

Mohamed Tabti, Adil Eddahbi, Said Ouaskit, Lahcen Elarroum

World Journal of Condensed Matter Physics Vol.2 No.3, August 31, 2012

DOI: 10.4236/wjcmp.2012.23023 4,075 Downloads 7,455 Views Citations
Impact of Mutations on K-Ras-p120GAP Interaction (Articles)

Chunxia Gao, Leif A. Eriksson

Computational Molecular Bioscience Vol.3 No.2, May 30, 2013

DOI: 10.4236/cmb.2013.32002 5,059 Downloads 9,679 Views Citations
Viscosity of Nanofluids. Why It Is Not Described by the Classical Theories (Articles)

Valery Ya. Rudyak

Advances in Nanoparticles Vol.2 No.3, July 29, 2013

DOI: 10.4236/anp.2013.23037 8,965 Downloads 16,511 Views Citations
Molecular Dynamics Simulations of the DNA-CNT Interaction Process: Hybrid Quantum Chemistry Potential and Classical Trajectory Approach (Articles)

Mirzoaziz A. Khusenov, Ermuhammad B. Dushanov, Kholmirzo T. Kholmurodov

Journal of Modern Physics Vol.5 No.4, February 21, 2014

DOI: 10.4236/jmp.2014.54023 4,137 Downloads 7,180 Views Citations
This article belongs to the Special Issue on Molecular Dynamics Method
Analysis of Activation Energies & Experimental Evidence for Energetic Phase Separation in Ge_xSe_1-xGlassy System (Articles)

Deepak Sharma, Anand Mohan Awasthi

New Journal of Glass and Ceramics Vol.4 No.2, April 28, 2014

DOI: 10.4236/njgc.2014.42005 5,693 Downloads 7,353 Views Citations
Nano-Scale Modelling and Simulation of Metal Wiredrawing by Using Molecular Dynamics Method (Articles)

Ken-ichi Saitoh, Youhei Sameshima, Syuhei Daira

World Journal of Nano Science and Engineering Vol.4 No.2, May 30, 2014

DOI: 10.4236/wjnse.2014.42010 4,712 Downloads 6,412 Views Citations
Geometrodynamical Analysis to Characterize the Dynamics and Stability of a Molecular System through the Boundary of the Hill’s Region (Articles)

Alberto Vergel, Rosa M. Benito, Juan C. Losada, Florentino Borondo

Applied Mathematics Vol.5 No.16, September 19, 2014

DOI: 10.4236/am.2014.516251 4,429 Downloads 5,622 Views Citations
This article belongs to the Special Issue on Differential Geometry
Molecular Dynamics Simulation of Glass Forming Ability of Al₃₀Co₁₀Amorphous Alloy (Articles)

Chunping Fu, Lingtao Sun, Zhengfu Cheng

Open Journal of Applied Sciences Vol.5 No.9, September 29, 2015

DOI: 10.4236/ojapps.2015.59053 2,973 Downloads 4,566 Views Citations
Thymidine Glycol: The Effect on DNA Structure and DNA Binding by Site-Specific Proteins (Articles)

Elena A. Kubareva, Fan Yang, Alexandra Yu. Ryazanova, Nina G. Dolinnaya, Andrei V. Golovin, Nikolai V. Molochkov, Elena A. Romanova, Elizaveta A. Karpova, Timofei S. Zatsepin, Tatiana S. Oretskaya

Natural Science Vol.7 No.11, November 16, 2015

DOI: 10.4236/ns.2015.711051 5,510 Downloads 6,931 Views Citations
Path Integral Molecular Dynamics Simulation on Atomic Distribution in Amorphized Ice Ic (Articles)

Naoka Sato, Kenichi Kinugawa

Natural Science Vol.8 No.11, November 14, 2016

DOI: 10.4236/ns.2016.811048 1,915 Downloads 4,178 Views Citations
Characterizing Property of States: Effect of Defects on the Coefficient of Thermal Expansion and the Specific Heat Capacity of ZrB₂ (Articles)

Jude O. Ighere, P. Alex Greaney

New Journal of Glass and Ceramics Vol.10 No.2, March 27, 2020

DOI: 10.4236/njgc.2020.102002 884 Downloads 2,790 Views Citations
Molecular Dynamics, Diffusion Coefficients and Activation Energy of the Electrolyte (Anode) in Lithium (Li and Li⁺), Sodium (Na and Na⁺) and Potassium (K and K⁺) (Articles)

Alain Second Dzabana Honguelet, Timothée Nsongo, Bitho Rodongo, Earvin Loumbandzila

Modeling and Numerical Simulation of Material Science Vol.14 No.1, November 30, 2023

DOI: 10.4236/mnsms.2024.141002 263 Downloads 1,016 Views Citations
Avocado Fruit Defensin (PaDef) Promote Trypsin and Chymotrypsin Enzyme Activity: A Computational Approach (Articles)

Cinthya Estefani López-Aguilar, Karen Astrid Ortiz-Vargas, Silvia Valdés-Rodríguez, Pedro Navarro-Santos, Luis María Suárez-Rodríguez, Mariela Gómez-Romero, Alejandra Ochoa-Zarzosa, Joel Edmundo López-Meza, Rodolfo López-Gómez

American Journal of Plant Sciences Vol.17 No.1, January 23, 2026

DOI: 10.4236/ajps.2026.171006 72 Downloads 405 Views Citations
Tunable Energetic Stabilization Governs Self- and Mixed-Aggregation of Möbius and Bracelet Cyclotides (Articles)

Nithikumar R. Yadav, Eric N. Njabon, Issofa Patouossa, Neville Y. Forlemu

Computational Chemistry Vol.14 No.2, March 20, 2026

DOI: 10.4236/cc.2026.142002 48 Downloads 214 Views Citations
Effect of disulfide bridges deletion on the conformation of the androctonin, polyphemusin-I, and thanatin antimicrobial peptides: molecular dynamics simulation studies (Articles)

Jorge Ricardo Moreira Castro, Carlos Alessando Fuzo, Léo Degrève

Journal of Biophysical Chemistry Vol.2 No.3, August 9, 2011

DOI: 10.4236/jbpc.2011.23030 4,831 Downloads 9,155 Views Citations

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