Parallel Molecular Dynamics; NAMD Benchmarking; Grid - Articles

Single Adatom Adsorption and Diffusion on Fe Surfaces (Articles)

Changqing Wang, Dahu Chang, Chunjuan Tang, Jianfeng Su, Yongsheng Zhang, Yu Jia

Journal of Modern Physics Vol.2 No.9, September 19, 2011

DOI: 10.4236/jmp.2011.29130 5,621 Downloads 10,129 Views Citations
MD Simulations of the P53 oncoprotein structure: the effect of the Arg273→His mutation on the DNA binding domain (Articles)

Kholmirzo Kholmurodov, Ermuhammad Dushanov, Kenji Yasuoka

Advances in Bioscience and Biotechnology Vol.2 No.5, October 13, 2011

DOI: 10.4236/abb.2011.25048 5,089 Downloads 10,266 Views Citations
Multi-Scale Modeling of Metal-Composite Interfaces in Titanium-Graphite Fiber Metal Laminates Part I: Molecular Scale (Articles)

Jacob M. Hundley, H. Thomas Hahn, Jenn-Ming Yang, Andrew B. Facciano

Open Journal of Composite Materials Vol.1 No.1, October 25, 2011

DOI: 10.4236/ojcm.2011.11003 7,807 Downloads 18,981 Views Citations
1,4-DHP-lipid parameters and rod like micellae (Articles)

Inta Liepina, Cezary Czaplewski, Adam Liwo, Gunars Duburs

Journal of Biophysical Chemistry Vol.2 No.4, November 9, 2011

DOI: 10.4236/jbpc.2011.24044 4,199 Downloads 7,963 Views Citations
Molecular dynamics simulation of the interaction of ethanol-water mixture with a Pt surface (Articles)

Kholmirzo Kholmurodov, Ermuhammad Dushanov, Kenji Yasuoka, Hagar Khalil, Ahmed Galal, Sameh Ahmed, Nasser Sweilam, Hatem Moharram

Natural Science Vol.3 No.12, December 16, 2011

DOI: 10.4236/ns.2011.312126 7,596 Downloads 15,707 Views Citations
The diffusion and concentration effects of formamide on a TiO₂ surface in the presence of a water solvent (Articles)

Ermuhammad Dushanov, Kholmirzo Kholmurodov, Kenji Yasuoka

Natural Science Vol.4 No.5, May 18, 2012

DOI: 10.4236/ns.2012.45044 5,678 Downloads 10,070 Views Citations
Melting of Argon Cluster: Dependence of Caloric Curves on MD Simulation Parameters (Articles)

Mohamed Tabti, Adil Eddahbi, Said Ouaskit, Lahcen Elarroum

World Journal of Condensed Matter Physics Vol.2 No.3, August 31, 2012

DOI: 10.4236/wjcmp.2012.23023 4,094 Downloads 7,529 Views Citations
Impact of Mutations on K-Ras-p120GAP Interaction (Articles)

Chunxia Gao, Leif A. Eriksson

Computational Molecular Bioscience Vol.3 No.2, May 30, 2013

DOI: 10.4236/cmb.2013.32002 5,112 Downloads 9,784 Views Citations
Viscosity of Nanofluids. Why It Is Not Described by the Classical Theories (Articles)

Valery Ya. Rudyak

Advances in Nanoparticles Vol.2 No.3, July 29, 2013

DOI: 10.4236/anp.2013.23037 9,001 Downloads 16,611 Views Citations
Molecular Dynamics Simulations of the DNA-CNT Interaction Process: Hybrid Quantum Chemistry Potential and Classical Trajectory Approach (Articles)

Mirzoaziz A. Khusenov, Ermuhammad B. Dushanov, Kholmirzo T. Kholmurodov

Journal of Modern Physics Vol.5 No.4, February 21, 2014

DOI: 10.4236/jmp.2014.54023 4,174 Downloads 7,279 Views Citations
This article belongs to the Special Issue on Molecular Dynamics Method
Analysis of Activation Energies & Experimental Evidence for Energetic Phase Separation in Ge_xSe_1-xGlassy System (Articles)

Deepak Sharma, Anand Mohan Awasthi

New Journal of Glass and Ceramics Vol.4 No.2, April 28, 2014

DOI: 10.4236/njgc.2014.42005 5,735 Downloads 7,421 Views Citations
Nano-Scale Modelling and Simulation of Metal Wiredrawing by Using Molecular Dynamics Method (Articles)

Ken-ichi Saitoh, Youhei Sameshima, Syuhei Daira

World Journal of Nano Science and Engineering Vol.4 No.2, May 30, 2014

DOI: 10.4236/wjnse.2014.42010 4,739 Downloads 6,471 Views Citations
Molecular Dynamic Study of Pull-In Instability of Nano-Switches (Articles)

Sogand Hoshyarmanesh, Mohsen Bahrami

Advances in Nanoparticles Vol.3 No.3, August 28, 2014

DOI: 10.4236/anp.2014.33017 3,876 Downloads 5,233 Views Citations
Geometrodynamical Analysis to Characterize the Dynamics and Stability of a Molecular System through the Boundary of the Hill’s Region (Articles)

Alberto Vergel, Rosa M. Benito, Juan C. Losada, Florentino Borondo

Applied Mathematics Vol.5 No.16, September 19, 2014

DOI: 10.4236/am.2014.516251 4,451 Downloads 5,682 Views Citations
This article belongs to the Special Issue on Differential Geometry
Molecular Dynamics Simulation of Glass Forming Ability of Al₃₀Co₁₀Amorphous Alloy (Articles)

Chunping Fu, Lingtao Sun, Zhengfu Cheng

Open Journal of Applied Sciences Vol.5 No.9, September 29, 2015

DOI: 10.4236/ojapps.2015.59053 3,010 Downloads 4,640 Views Citations
Thymidine Glycol: The Effect on DNA Structure and DNA Binding by Site-Specific Proteins (Articles)

Elena A. Kubareva, Fan Yang, Alexandra Yu. Ryazanova, Nina G. Dolinnaya, Andrei V. Golovin, Nikolai V. Molochkov, Elena A. Romanova, Elizaveta A. Karpova, Timofei S. Zatsepin, Tatiana S. Oretskaya

Natural Science Vol.7 No.11, November 16, 2015

DOI: 10.4236/ns.2015.711051 5,530 Downloads 7,001 Views Citations
Path Integral Molecular Dynamics Simulation on Atomic Distribution in Amorphized Ice Ic (Articles)

Naoka Sato, Kenichi Kinugawa

Natural Science Vol.8 No.11, November 14, 2016

DOI: 10.4236/ns.2016.811048 1,955 Downloads 4,251 Views Citations
Computational and Experimental Analyses of Detachment Force at the Interface between Carbon Fibers and Epoxy Resin (Articles)

Kazuki Mori, Nobuhiko Matsumoto, Sukeharu Nomoto, Kenji Tsuruta

Open Journal of Composite Materials Vol.7 No.4, July 27, 2017

DOI: 10.4236/ojcm.2017.74011 1,372 Downloads 3,529 Views Citations
This article belongs to the Special Issue on Composite Interface and Damages
Molecular Dynamics Simulation of Grain Refinement in a Polycrystalline Material under Severe Compressive Deformation (Articles)

Takuya Uehara

Materials Sciences and Applications Vol.8 No.12, November 25, 2017

DOI: 10.4236/msa.2017.812067 3,698 Downloads 5,429 Views Citations
Clusters Deposition on Surface an Atomic Scale Study by Computer Simulation Method (Articles)

Akbarali Rasulov, Nodirbek Ibroximov

Journal of Applied Mathematics and Physics Vol.7 No.10, October 14, 2019

DOI: 10.4236/jamp.2019.710156 576 Downloads 1,502 Views Citations

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