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![]() Advances in Microbiology, 2013, 3, 343-349 http://dx.doi.org/10.4236/aim.2013.34048 Published Online August 2013 (http://www.scirp.org/journal/aim) Dinamic of Bacteria Desnitrificants and Nitrificants in the Rizospheric of Wheat with Slow Release of Fertilizer, Irrigated with Waste or Well Water Sandra Grisell Mora-Ravelo1*, Francisco Gavi Reyes2, Jesús Pérez Moreno3, Juan José Peña Cabriales2, Leonardo Tijerina Chávez4, Ma. de Lourdes de la Isla de Bauer2 1Posgrado en Biología, Instituto Tecnológico de Ciudad Victoria, Ciudad Victoria, México 2Programa de Hidrociencias, Colegio de Posgraduados, Montecillo, México 3Programa de Edafología, Colegio de Posgraduados, Montecillo, México 4Departamento de Biotecnología, CINVESTAV, Irapuato, México Email: *[email protected] Received May 30, 2013; revised June 30, 2013; accepted July 10, 2013 Copyright © 2013 Sandra Grisell Mora-Ravelo et al. This is an open access article distributed under the Creative Commons Attribu- tion License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. ABSTRACT The study of the paper about the rhizosphere in the transformation of nitrogen compounds can generate knowledge of the microbial and biochemical atmosphere of the rhizosphere of wheat, for the understanding of the dynamics of the N in agricultural zones, with the purpose of optimizing the fertilizer use and increasing the productivity of the cultures. Therefore, the objective of the present work was to know the effect the rhizosphere in the dynamics of the bacterial populations that take part in the cycle of the N in wheat nourished with slow release fertilizer and one commercial, irri- gated with waste water or well. Analyses in the soil took place vertisol used in the experiment with the rhizospheric and non rhizospheric fraction. The slow release fertilizer used has a matrix enriched with N and P and is in the process of being patented (it explains in materials and methods). Each fertilizer was evaluated and the combination of the slow release fertilizer with organic fertilizer. The technique of the number most probable was used (MNP) to carry out the quantification of the nitrificants and denitrificants bacteria to the 55, 67 and 97 days after sowing (Dds). The results obtained for the MNP of denitrificants bacteria and Nitrosomonas indicate that the effect average of the types of water, soil and fertilizers, as well as their interaction to each other was not significant (p > 0.05). The effect of the fertilizing type and soil (rhizospheric and non rhizospheric) in the MNP of Nitrobacter was significant (p < 0.05). The tendencies show that the non rhizospheric soil is more favorable for the development of denitrificants bacteria and Nitrobacter, whereas the MNP of Nitrosomonas was greater in rhizospheric soil. Keywords: Nitrificants; Vermicompost; Nitrites; Nitrates; Ammonium 1. Introduction The rhizosphere constitutes the surface and the immedi- ate region the root surrounds, that provides with an eco- logical niche to the microorganisms of the soil since in her the nutriments are more available. The atmosphere rhizospheric is a scene integrated by the interaction soil, plants and organisms. Between these the bacteria and fungi are in greater density in the rhizosphere than that in the soil without roots [1]. The interactions between the microorganisms and the roots determine the rhizosphere effect, on same populations and the activity of the mi- croorganisms on the availability of the nutriments for the plants [2,3]. In nitrificants bacteria, rhizospheric are developed (Ni- trobacter and Nitrosomonas); and denitrificants bacteria (Brasilense Azospirillum, Bacillus azotoformas, thioba- cillus desnitrificans, Pseudomonas, etc.), those alto- gether play an important role inside of the cycle of the N. The nitrificants bacteria they are of quimiotrofic me- tabolism and the oxidation of the 4 to 2 NH NO , it serves like power plant as these microorganisms whereas the Corg they obtain it from the fixation of the CO2, of the air or the atmosphere of the soil. The growth of these bacteria is smaller than the growth of the majority of the *Corresponding author. C opyright © 2013 SciRes. AiM ![]() S. G. MORA-RAVELO ET AL. 344 bacteria of the soil that are of quimiotrofic metabolism [4,5]. Within the microorganisms, the bacteria constitute the only group that has the physiological characteristic to cause the denitrification. All the bacteria denitrificants are anaerobic, with the exception of the species of the sort Propionibacterium that fermenters anaerobic they are forced that is able to carry out the denitrification. Most of the denitrificants bacteria they are of quimio- trofic metabolism since they use carbohydrates, organic acids and diverse organic compounds like C and power plant during their anaerobic cycle in the presence of di- verse oxides of N [6]. The activity, diversity and structure of these microor- ganisms are sensible to the changes in the edafic atmos- phere caused by the carbon sources and energy, pressure, ventilation and interaction between the microorganisms, pH, humidity, temperature, content of oxygen and nutria- ments available [7]. The most important factor is the availability of nutriments because it promotes the activity of the microorganisms in the rhizosphere, measurement like rhizosphere phantom, which is of 2, 5 ground times greater fertilized than in grounds non fertilized; also mic- robiota measured with 14C is tripled when fertilizers are applied. 2. Materials and Methods This study was conducted in two phases. The first corre- sponded to establishing a greenhouse test for generating environments where microorganisms would study popu- lations and the second consisted of determining the inci- dence microbial laboratory. A haplic vertisol from Gua- najuato, Mexico was used [8]. The physical and chemi- cal properties of the studied soil and water are shown in Tables 1 and 2. We used wheat (Triticum aestivum L.) variety “Tlaxcala F2000” classified as having an inter- mediate cycle and developed for natural rainfall condi- tions by the INIFAP (Instituto Nacional de Investiga- ciones Forestales, Agropecuarias y Pecuarias). This wheat has an average cycle of 118 days, with a harvest- ing interval from 107 to 135 days [9]. The applied fertili- zers were: monoammonic phosphate plus urea termed a “commercial fertilizer” (CF), a vermicompost termed “organic fertilizer” (OF), and a slow release fertilizer (SRF) called “GAPU” (constituted by a clay matrix en- riched with 8.1 and 6.3% of N and P in weight, respec- tively, in process to be patented). The treatments were designed to evaluate the simple effect of each one of these fertilizers and the combination of SRF plus OF. Vermicompost (containing 1.37% and 0.75% of N and P, respectively) was produced with residues of plants used for gardening. Used waste and well waters came from urban zones from Montecillo, Texcoco, Mexico. The dose of fertilization of N and P used for the greenhouse Table 1. Physical and chemical characteristics of the experi- mental soil. Variable Method Value Units N MicroKjeldahl 0.07 % Extractable P Olsen 34 mg kg−1 Organic matter Walkley and Black 1.4 % CCI Extraction with ammonium acetate 39 cmolc kg−1 pH (relation 2:1)Potentiometer 7.76 E.C. Conductimeter 0.69 dS m−1 Sand Bouyoucos 10 % Lime 17 % Clay 73 % Textural class Clayish E.C. = Electrical conductivity, CCI = Capacity of cationic interchange. Table 2. Physical and chemical characteristics of the ex- perimental water. Variable Value Units Waste water Well water Total N 72 32.00 mg L−1 N-NO3 6 22.27 meq L−1 N-NH4 55 8.64 meq L−1 Soluble P-PO4 11 0.86 mg L−1 Total P 39 0.60 mg L−1 pH 7.05 7.45 E.C. 0.59 0.59 dS m−1 E.C. = Electrical conductivity. experiment was greater than that recommended in the studied area in eastern Mexico “Bajío Guanajuatense” where the studied soil was collected. Following the re- commendation of Terman, et al. (1962) [10] for green- house experiments, the dose was equivalent to 360 and 257 kg of N and P per ha, respectively. All N and P were applied at the time of sowing. The experimental units (EU) consisted of cylindrical pots which contained 2 kg of soil: without plants (designed to collect non rhizo- spheric soil) and with three plants (from which the rhi- zospheric soil was collected). The number of cylindrical pots was calculated so that in every date of sampling (55.67 and 97 days after sowing) three experimental units by treatment were collected (Table 3). In order to obtain the rhizospheric soil, the soil portion used was that strongly adhered to the root. Ten grams were weighed separately of rhizospheric and non rhizo- Copyright © 2013 SciRes. AiM ![]() S. G. MORA-RAVELO ET AL. 345 Table 3. Treatments in the experiment. Number of treatment Type of soil Type of fertilizer Type of water Number of replicates 1 RS CF Waste water 3 2 RS CF Well water 3 3 NR CF Waste water 3 4 NR CF Well water 3 5 RS SRF Waste water 3 6 RS SRF Well water 3 7 NR SRF Waste water 3 8 NR SRF Well water 3 9 RS OF Waste water 3 10 RS OF Well water 3 11 NR OF Waste water 3 12 NR OF Well water 3 13 RS SRF + OF Waste water 3 14 RS SRF + OF Well water 3 15 NR SRF + OF Waste water 3 16 NR SRF + OF Well water 3 17 RS C Waste water 3 18 RS C Well water 3 19 NR C Waste water 3 20 NR C Well water 3 Total units number of experimental 240 Unit SR = Rhizospheric soil, NR = Non rhizospheric soil; CF = Commercial fertilizer, SRF = Slow release fertilizer, OF = Organic fertilizer (vermicom- post), C = Control. spheric soil. Each of these samples was added to 90 mL of Ringer solution. In the determination of the microbial incidence, the technique of the most probable number (MPN) was used for the quantification of nitrificant and denitrificant bacteria [11]. Selective growth media for the fractions of the rhizospheric and non rhizosphereic soil were used. A series of ten dilutions was used to inoculate five tubes with each level of dilution (10−8 to 10−5). The cultures were incubated to 28˚C during 7 and 21 days for the denitrificant and nitrificant bacteria, respectively and their presence was identified by using specific diagnostic tests. (CaCO3) NH4 was used for Nitrosomonas, (CaCO3) NO2 for Nitrobacter and of Griess-Ilosvay reagent for both groups [12]. 3. Results The experimental design did not allow statistical eva- luation of sampling interaction with the other factors evaluated: type of water, fertilizers and soil type (vs. rhi- zosphere. Rhizospheric not) for any of the populations of bacteria quantified. Figure 1 shows the temporal changes of the populations of denitrificant bacteria of non rhizospheric soil in relation to plant age with waste water and well water. In general terms, there was an increase in denitrificant bacteria populations, when the plan age in- creased, indepently of type of water. The average effect of the types of water, soil and fertilizers (as well as their interactions between them) was not significant (p > 0.05) on the development of the denitrificant bacteria popula- tions, evaluated MPN. In general terms, The populations denitrificant were higher in non rhizospheric in relation to those found in rhizospheric soil, independently of the type de water. In average, denitrificant from non rhizo- spheric soil populations were higher in well water than in waste water. Mean while, the opposite trend was obser- ved in rhizospheric soil (Table 4). (a) (b) Figure 1. MPN of denitrificant bacteri a in non-rhizospheric soil irrigated with (a) waste water or (b) well water. CF = Commercial fertilizer, SRF = Slow release fertilizer, OF = Organic fertilizer (vermicompost), C = Control. Vertical lines show 95% confidence intervals. Copyright © 2013 SciRes. AiM ![]() S. G. MORA-RAVELO ET AL. 346 In relation to fertilizers, the highest populations of de- nitrificant bacteria were observed in Fertilizer slow re- lease and the lowest ones were recorded in Commercial Fertilizer (Table 5). Pointed out that plant organic compounds can be used as a source of nutrients energy to desnitrificants bacteria. Also it is inferred, that the waste water can contain in its M. O factors of growth for same the bacteria; neverthe- less the toxic elements can predominate in their negative effect that limits the increase of the bacterial population [13]. It was observed (Table 5) that when SRF was ap- plied there is minor proliferation of denitrificants bacteria, compared with the witness and the application of other fertilizers (OF and CF) and his combinations. This can indicate that the N of the SRF is less susceptible to lose itself by denitrification. Figure 2 shows the temporal changes of the populations of Nitrobacter bacteria of non rhizospheric soil in rela- tion to plant age with waste water and well water. In general terms, there was an increase in denitrificant bac- teria populations, when the plan age increased, inde- pently of type of water. The average effect of the types of water, soil and fer- tilizers (as well as their interactions between them) was not significant (p > 0.05) on the development of the Ni- trobacter bacteria populations, evaluated MPN. In gen- eral terms, the populations Nitrobacter were higher in non rhizospheric in relation to those found in rhizo- Table 4. Average of MPN of denitrificant bacteria in two types of water and soil during three samplings. Type of water Rhizospheric soil Non rhizospheric soil Average Waste water 0.65 × 105 0.82 × 105 0.73 × 105 Well water 0.26 × 105 7.3 × 105 3.7 × 105 Average 0.45 × 105 4.1 × 105 Table 5. Average of the MPN of denitrificant bacteria in rhizospheric soil and non rhizospheric soil with addition of three types of fertilizer. Fertilizer Rhizospheric soil Non rhizospheric soil Average CF 6.5 × 105 8.3 × 105 7.4 × 105 C 5.4 × 105 6.4 × 105 5.9 × 105 OF 0.31 × 105 0.83 × 105 0.57 × 105 SRF + OF 0.27 × 105 0.37 × 105 0.32 × 105 SRF 0.11 × 105 0.11 × 105 0.11 × 105 Average 2.52 × 105 3.2 × 105 CF = Commercial fertilizer, SRF = Slow release fertilizer, OF = Organic fertilizer (vermicompost), C = Control. (a) (b) Figure 2. MPN of Nitrobacter in non-rhizospheric soil irri- gated with (a) waste water or (b) well water. CF = Com- mercial fertilizer, SRF = Slow release fertilizer, OF = Or- ganic fertilizer (vermicompost), C = Control. Vertical lines show 95% confidence intervals. spheric soil, independently of the type de water. In aver- age, Nitrobacter from non rhizospheric soil populations were higher in well water than in waste water. Mean while, the opposite trend was observed in rhizospheric soil (Table 6). In relation to fertilizers, the highest populations of Ni- trobacter bacteria were observed in Fertilizer slow re- lease and the lowest ones were recorded in Commercial Fertilizer (Table 7). Figure 3 shows the temporal changes of the Nitrosomonas populations of bacteria of non rhizospheric soil in relation to plant age with waste water and well water. In general terms, there was an in- crease in Nitrosomonas bacteria populations, when the plan age increased, indepently of type of water (Table 8). In Table 9, it was observed that the fertilizers that promote the MNP of Nitrobacter are the SRF and the CF. The most probable number of the denitrificants bacteria is greater than in Nitrobacter and Nitrosomonas as it in- dicates [14] that indicates for example the root of wheat has a strong effect on the microbial populations within Copyright © 2013 SciRes. AiM ![]() S. G. MORA-RAVELO ET AL. 347 Table 6. Average of MPN of Nitrobacter in two types of wa- ter and soil during three samplings. Type of water Rhizospheric soil Non rhizospheric soil Average Waste water 7.2 × 105 10 × 105 8.6 × 105 Well water 3.5 × 105 2.6 × 105 3.1 × 105 Average 5.3 × 105 6.3 × 105 Table 7. Average of the MPN of Nitrobacter in rhizospheric soil and non rhizospheric soil with addition of three types of fertilizer. Fertilizer Rhizospheric soil Non rhizospheric soil Average CF 12 × 105 1.3 × 105 6.7 × 105 C 9.2 × 105 6.3 × 105 7.7 × 105 SRF 1.9 × 105 0.9 × 105 1.4 × 105 SRF + OF 1.9 × 105 5.2 × 105 3.5 × 105 OF 1.1 × 105 6.4 × 105 3.7 × 105 Average 5.2 × 105 4.0 × 105 CF = Commercial fertilizer, SRF = Slow release fertilizer, OF = Organic fertilizer (vermicompost), C = Control. (a) (b) Figure 3. MPN of Nitrosomonas in non- rhizospheric soil irrigated wi th (a) waste w ater or (b) well water. CF = Com- mercial fertilizer, SRF = Slow release fertilizer, OF = Or- ganic fertilizer (vermicompost), C = Control. Vertical lines show 95% confidence intervals. which denitrificant emphasizes the high number of bac- teria. 4. Discussion In this experiment, we possibly suppose that there was no an independently marked rhizospheric effect of the type of fertilizer and used water, had to that the sampled rhizospheric zone was not the adapted one, due to the space so reduced in that were the wheat plants. However, the MNP of the bacteria studied in this work was not affected by the zone by the roots nor by the fertilization with N as it concludes [1,2,15]; which they investigated that the composition of the community of bacteria in the rhizosphere is affected by the complex interaction be- tween the type of soil, species of plants location of the zone by the roots and the nitrogen fertilization. Appar- ently, there was no a marked rhizospheric effect on Ni- trosomonas (Table 9), because the existing potential in this zone to carry out the liberation of the 4 NH , consti- tutes necessary the power provision for the development of this sort of nitrificants bacteria [16]. Contrary to the referred thing by [17] on the inhibiting effect caused by the organic compound presence on the development of the nitrificantes populations, it was verified in the present investigation that in the rhizosphere, in which a great abundance of organic compounds exists, these popula- tions were stimulated (Tables 6 and 7), which agrees with the results obtained by [18], for the rhizosphere of Table 8. Average of MPN of Nitrosomonas in two types of water and soil during three samplings. Type of waterRhizospheric soil Non rhizospheric soil Average Well water 6.1 × 105 3.1 × 105 4.6 × 105 Waste water 2.2 × 105 2.3 × 105 2.3 × 105 Average 4.1 × 105 2.7 × 105 Table 9. Average of the MPN of Nitrosomonas in rhizosphe- ric soil and non rhizospheric soil with addition of three ty- pes of fertilizer. Fertilizar Rhizospheric soil Non rhizospheric soil Average CF 9.3 × 105 3.0 × 105 6.2 × 105 C 4.8 × 105 4.1 × 105 4.5 × 105 OF 3.1 × 105 2.2 × 105 2.7 × 105 SRF + OF2.1 × 105 2.8 × 105 2.5 × 105 SRF 1.6 × 105 1.7 × 105 1.7 × 105 Average 4.2 × 105 2.8 × 105 CF = Commercial fertilizer, SRF = Slow release fertilizer, OF = Organic fertilizer (vermicompost), C = Control. Copyright © 2013 SciRes. AiM ![]() S. G. MORA-RAVELO ET AL. 348 some plants. However, the magnitude of the development shown by the nitrificants bacteria in the rhizosphere of wheat, and with its development in the fraction of the rhizospheric soil (Figure 2), it suggests in her takes place an effective process of nitrification [19]. Woldendorp and Laanbroek (1989) [20] reported that the rate of nitri- fication is a predominant process in the rhizosphere, which can lead to a considerable production of 3 NO in this zone. However, it was difficult to make a real esti- mation of the rate from production of 2 in the rhizo- sphere, which can lead to a considerable production of 3 in that zone, since in her great part of the N avail- able is directed towards immobilization and the absorp- tion by the roots. The denitrificants bacteria also were stimulated in greater number of cells as much in the rhizosphere of the ground as in the non rhizospheric soil the population increase can be in favor certain not only of the great present availability of composed of carbon; but also by the exudate production in the rhizosphere, which can lead to a considerable production of 3 NO NO NO on the part of the nitrificants bacteria, since he himself ion is used by the denitrificants bacteria like electron acceptor before the reduced present oxygen concentration in the rhizosphere [21]. The number of cells or MNP was ob- tained in Nitrobacter and Nitrosomonas was greater to which this is reported generally can be viable since al- though the conditions in which work was of anaerobiosis the sort of the Nitrobacter can grow occasionally under anaerobic atmosphere breathing where the M. O. is min- eralized [4,22,23]. Kowalchuk and Stephen, (2001) [4], emphasized that when the technique of the MNP is used the value of the Nitrosomonas underestimates low values of the real number of cells caused by factors as pH and the provision of N. Also, Watson [24] reported that the count of Nitrobacter is influenced by pH. Although in our case we discarded that pH has been the factor that I influence in the number of cells that we reported for these sorts. We agree with reported by Rice and Pan- choly [25] who emphasize that the MNP can be a ques- tionable procedure of count, this is important if they are possible to be seen that they exist alternative in the inter- pretation of the changes of and 3 in the soil. The low concentrations of 3 can be the result of the best efficiency in the conduction of these and the in- crease of the 4 can be due to the increase of N in the soil. A low concentration of 3 can as resulting from happen in an actively nitrificant habitat the denitri- fication or by the fast conduction towards the plants as it indicates Allison and Prosser [26]. On the other hand, also it can be that the efficiency of the method of the MNP low is compared with other methods possibly this must to the selectivity of means of used growth and to the presence of added cells to the dissolutions as they indicate [27]. However, the MNP of Nitrobacter and 4 NO NH NH NO NH NO Nitrosomonas of these sorts suggest both processes (4 2 NO and 2 NO 3) respectively are similar so that both steps produce different amounts from energy. From the uncertainty of the method of the MNP diverse mechanisms exist that can explain this: NO 3 NO 1) Nitrosomonas it has a greater mortality than the Ni- trobacter. This happens particularly in soils where this sort (Nitrosomonas) is died by the acid production [27, 28]. 2) Heterotrofic development of Nitrobacter species [29]. 3) Anaerobic growth of Nitrobacter through and organic substrat [30]. 4) Denitrificants relation / between Nitro- bacter and bacteria [31]. 2 NO 3 NO NH 5. Conclusions 1) The effects of the types of water, fertilizer and ground the MNP of denitrificants bacteria and those affected in form differential that take part in the transformation of 4 to 3 (Nitrobacter and Nitrosomonas). NO 2) The MNP of the denitrificants bacteria was not af- fected by the types of fertilizer, soil and water of irriga tion. 3) The MNP of Nitrobacter was promoted positively by the type of soil and fertilizer in average. Nitrobacter was developed better in the non rhizospheric soil. This sort of bacteria was stimulated by the OF and the combi- nation of SRF + OF. The waste water did not have an effect in the MNP of this group of bacteria compared with the well water. 4) The MNP of Nitrosomonas. It was affected only by the type of soil. This sort of bacteria have better devel- opment in the rhizospheric soil. 6. Acknowledgments This study was financed by project CONACYT 38999. REFERENCES [1] J. M. Lynch, “Resilience of the Rhizosphere Anthropo- genic Disturbance,” Biodegradation, Vol. 13, No. 1, 2002, pp. 21-27. doi:10.1023/A:1016333714505 [2] P. Marschner, C.-H. Yang, R. Lieberei and D. E. 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